| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89054335
Identifier: 89054335
GI number: 89054335
Start: 1831380
End: 1831520
Strand: Direct
Name: 89054335
Synonym: Jann_1844
Alternate gene names: NA
Gene position: 1831380-1831520 (Clockwise)
Preceding gene: 89054334
Following gene: 89054336
Centisome position: 42.41
GC content: 60.99
Gene sequence:
>141_bases ATGGCCAAAATGCGCAAGAAATCCGACCTGCCTACCAAGACCTGCGCCAATTGCGGGCTGCCATTCACCTGGCGCAAGAA GTGGGCGAAGGTCTGGGACGAGGTCCGTTATTGCTCGGACCGGTGCCGCCGCGCGAAGTGA
Upstream 100 bases:
>100_bases CCTTATTCGCGCCACCCCTCAATTCCCCGTTCTTCAAATATCCCCGCCGGAGGCATCGCACCCCCTCGACCCGCGCTGTC GCCCGCCTATCTGGCTCTCC
Downstream 100 bases:
>100_bases TCGGCGCGGGGATCGCTTGCCCCGTTCCCACCCATCGCCTAGACCGCCAAGTTGACAAGATGGGCAATGGGACAAGACGG GAGAACAGCCAATGACGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 46; Mature: 45
Protein sequence:
>46_residues MAKMRKKSDLPTKTCANCGLPFTWRKKWAKVWDEVRYCSDRCRRAK
Sequences:
>Translated_46_residues MAKMRKKSDLPTKTCANCGLPFTWRKKWAKVWDEVRYCSDRCRRAK >Mature_45_residues AKMRKKSDLPTKTCANCGLPFTWRKKWAKVWDEVRYCSDRCRRAK
Specific function: Unknown
COG id: COG4338
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5551; Mature: 5419
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 13.0 %Cys+Met (Translated Protein) 8.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 11.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKMRKKSDLPTKTCANCGLPFTWRKKWAKVWDEVRYCSDRCRRAK CCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKMRKKSDLPTKTCANCGLPFTWRKKWAKVWDEVRYCSDRCRRAK CCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA