Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054325

Identifier: 89054325

GI number: 89054325

Start: 1820571

End: 1820963

Strand: Direct

Name: 89054325

Synonym: Jann_1834

Alternate gene names: NA

Gene position: 1820571-1820963 (Clockwise)

Preceding gene: 89054324

Following gene: 89054327

Centisome position: 42.16

GC content: 59.54

Gene sequence:

>393_bases
ATGACCAACCTTGGATATCTTGCCCTGCGCTATCTGTTGTGGATGATCGGGCTGCGCATCCTCTATATCGCGGCGGTGAA
TTTTCTGTTCATTCCCAACAGCTTGGGCAGCGCGGTGATCCTCGCATCTGTCCCGGCAATGGACATCGGTCGGCAGGCCG
TCCTGCGCGCGACTGCGCCTTTGGAGTTTGCGGATTGGGCCAAGGTCTGGGCGGTGATGATCAGCGTCTACCTGATCGTC
AATGTCATCCTGATTGCCATGCTGGTGCCCGCGTTCAGGGCGGCGTTTGCCGACCCGGTAGGTCTGCAATTGATCATCTT
GACAAGCGGGGGCGTCGCGCTTTTGCTGGCGCTCTTTCTTTGGATCGGCGCCCGGATCGGGGCGCGGGGTTAA

Upstream 100 bases:

>100_bases
AGCAGAGGCAAAAGCCACTTTGAAGGGCCAATGGCATTGCGGTGGGGGCAACCATCCCATATCGATGCGGCCAGTCCCTG
TCGCGCCGGAGCTTCGCCCC

Downstream 100 bases:

>100_bases
GCCAGGATCAAGCCGCCTCTGACAGGGCCTCCTCCGCCATCGCGCGCAGGTGATGCTTCATGTTCTTGCGCCGTGCTTCC
AGCCCGAAGACCTCCAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MTNLGYLALRYLLWMIGLRILYIAAVNFLFIPNSLGSAVILASVPAMDIGRQAVLRATAPLEFADWAKVWAVMISVYLIV
NVILIAMLVPAFRAAFADPVGLQLIILTSGGVALLLALFLWIGARIGARG

Sequences:

>Translated_130_residues
MTNLGYLALRYLLWMIGLRILYIAAVNFLFIPNSLGSAVILASVPAMDIGRQAVLRATAPLEFADWAKVWAVMISVYLIV
NVILIAMLVPAFRAAFADPVGLQLIILTSGGVALLLALFLWIGARIGARG
>Mature_129_residues
TNLGYLALRYLLWMIGLRILYIAAVNFLFIPNSLGSAVILASVPAMDIGRQAVLRATAPLEFADWAKVWAVMISVYLIVN
VILIAMLVPAFRAAFADPVGLQLIILTSGGVALLLALFLWIGARIGARG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14027; Mature: 13896

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLGYLALRYLLWMIGLRILYIAAVNFLFIPNSLGSAVILASVPAMDIGRQAVLRATAP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCC
LEFADWAKVWAVMISVYLIVNVILIAMLVPAFRAAFADPVGLQLIILTSGGVALLLALFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHH
WIGARIGARG
HHHHHCCCCC
>Mature Secondary Structure 
TNLGYLALRYLLWMIGLRILYIAAVNFLFIPNSLGSAVILASVPAMDIGRQAVLRATAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCC
LEFADWAKVWAVMISVYLIVNVILIAMLVPAFRAAFADPVGLQLIILTSGGVALLLALFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHH
WIGARIGARG
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA