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The map label for this gene is 89054279

Identifier: 89054279

GI number: 89054279

Start: 1775404

End: 1775868

Strand: Direct

Name: 89054279

Synonym: Jann_1788

Alternate gene names: NA

Gene position: 1775404-1775868 (Clockwise)

Preceding gene: 89054271

Following gene: 89054280

Centisome position: 41.12

GC content: 62.15

Gene sequence:

>465_bases
GTGATGCGTCAGTCTTTCTTCTCCATGATCCGCCGCGCCGGATTTGGCCTGGCCCTTGTGGCTGGGTTGGCCGCCTGTTC
GGCGACCTATACCAACCACGGCTACGTCCCGCCCCCCGAATTGCTGTCCGAGATCAGCATCGGAACCTCGCGGGAGCAGG
TGGCCGAGATTGCGGGCTCTCCGGGCACCGGCGGCGTGATGCGGGATGAGGCATGGTTCTACACCCAATACCGGGTGCGC
AACTTCACCTACAACGCCCCCGATGTGATCGAACGGGATATCGTCGCCATCTCGTTCAGCGATGCGGGGCGGGTCACCAA
TATTGAGCGGTTCGGGCTGGAGGACGGGCAGATCGTGCAATTGTCCCGCCGTGTGACCGAAAGCTCCGTGCGCGATCTTG
GGTTCTTCCGCTCGATCCTGTCGAACTTTGGCCGGATCAATCTCGGCGATATTGGCGGGTCCTGA

Upstream 100 bases:

>100_bases
CAAGACGTGTGGGGGGCAAACGCCTGTTTCACCCAGAGGTGAGGCGCGCAAAACTGAGCCTCCGATGGGGCCACCAGAGT
ATGTTCAGGCAGGGCCATTC

Downstream 100 bases:

>100_bases
CGTGGCCGGCGCCCCGGCTTTGGGGGGGGCTCGGACGGCGCCGCAGTTTCGTCTGCTCAAGGGTCAATACGCGGTGCGGA
TCGCGAGCACACCGGCCGAT

Product: SmpA/OmlA

Products: NA

Alternate protein names: SmpA/OmlA Domain-Containing Protein; SmpA/OmlA; SmpA/OmlA Domain Protein; SmAll Protein A; SmpA/OmlA Family Lipoprotein; SmpA / OmlA Family; SmpA/OmlA Family Protein; Lipoprotein

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MMRQSFFSMIRRAGFGLALVAGLAACSATYTNHGYVPPPELLSEISIGTSREQVAEIAGSPGTGGVMRDEAWFYTQYRVR
NFTYNAPDVIERDIVAISFSDAGRVTNIERFGLEDGQIVQLSRRVTESSVRDLGFFRSILSNFGRINLGDIGGS

Sequences:

>Translated_154_residues
MMRQSFFSMIRRAGFGLALVAGLAACSATYTNHGYVPPPELLSEISIGTSREQVAEIAGSPGTGGVMRDEAWFYTQYRVR
NFTYNAPDVIERDIVAISFSDAGRVTNIERFGLEDGQIVQLSRRVTESSVRDLGFFRSILSNFGRINLGDIGGS
>Mature_154_residues
MMRQSFFSMIRRAGFGLALVAGLAACSATYTNHGYVPPPELLSEISIGTSREQVAEIAGSPGTGGVMRDEAWFYTQYRVR
NFTYNAPDVIERDIVAISFSDAGRVTNIERFGLEDGQIVQLSRRVTESSVRDLGFFRSILSNFGRINLGDIGGS

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16896; Mature: 16896

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRQSFFSMIRRAGFGLALVAGLAACSATYTNHGYVPPPELLSEISIGTSREQVAEIAGS
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCC
PGTGGVMRDEAWFYTQYRVRNFTYNAPDVIERDIVAISFSDAGRVTNIERFGLEDGQIVQ
CCCCCCCCCCCEEEEEEEEEECCCCCCHHHHCCEEEEEECCCCCCCCHHHHCCCCCHHHH
LSRRVTESSVRDLGFFRSILSNFGRINLGDIGGS
HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
>Mature Secondary Structure
MMRQSFFSMIRRAGFGLALVAGLAACSATYTNHGYVPPPELLSEISIGTSREQVAEIAGS
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCC
PGTGGVMRDEAWFYTQYRVRNFTYNAPDVIERDIVAISFSDAGRVTNIERFGLEDGQIVQ
CCCCCCCCCCCEEEEEEEEEECCCCCCHHHHCCEEEEEECCCCCCCCHHHHCCCCCHHHH
LSRRVTESSVRDLGFFRSILSNFGRINLGDIGGS
HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA