Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054242

Identifier: 89054242

GI number: 89054242

Start: 1740045

End: 1741106

Strand: Direct

Name: 89054242

Synonym: Jann_1751

Alternate gene names: NA

Gene position: 1740045-1741106 (Clockwise)

Preceding gene: 89054241

Following gene: 89054243

Centisome position: 40.3

GC content: 56.4

Gene sequence:

>1062_bases
GTGACTGACCTTCCTCCTCGTACTGTAGAAGATGAGATCGCCTACCGGGTAGAGCGCGCGGAATTTGAACTGCGCGCGGA
ATATGAGGCCGAGACGGCGAAGTTGATCCAATCAATCCGCGATGAATACGCCTCTGCGCGGAAGAGTTTTCGGTTTTGGA
CCACGACGTTAGGGGCCCTGGCCCTTGGTCTTGTCGTGACTTGGGCGACCAACACCATCACGAACCGGGTTGACACTGCC
ATCGACGGGATGCGTACGGAGCTGAGGGAAGAGGCAGACACCTATATGTCGGACATGCGCAGTGCGCTGAATTCCTTTGC
CAGTGGCGAGGTCGACAGCCAATTCAGGCTCGAACGCGCACGCTTCGAGCAAATCCGGGAGGAGGAGCAGACCCTCACGA
CTTTGTTGCCGCTTGTGGTAGGTGAGGCGATTGATCTCGACGATGAAGGGTTCTCTCCCGGAAGCGACTCTCAAACCATG
ATCTTTGAAGCCTTGGAGGTCATCGGCCCCGAGGTTCTTGAACTGGACGGCTTCGTTTTTAACCTAGCCGCGCGGCGGCT
TGAACGCATCCTCGATACTTTCTGGAGACGTTGGGAATTCCATGACTTGCACATAGCATTCAACAGATTACCGGTAGAAC
TACAGGAGCGTTTGCTGGCCCATCCTGGCGAAGGCGTATTGTATACGATGGCAAATGCCTTGACCCAGGAGGTCATATTG
GAGGGCGAACTCCCGACGAACCGGCGAGACATCGCCGCCCGCGTATATGCGCAGCAGCCAATCCCTGATGGGCACGCATA
CAGACAGATTGCTTTGTTGAATCTGGTAGAGCGGGCCGCGGACGCAGACTGGGACGCAGCTTTTGTTCTGACTGAAACCA
CCGAACAACAACGGCGGTGGAACGGCTTTCGGTCCTACGCGGCTCAGTGGCAATTCTGTGCAGCCTTTGCGCGCCACATC
GCCCTTGAGGGCGCCTTGTCTGATCCAGTTGTGCAGCGTTTGAACACCCTTGTCGCGACAGCCAATCCCGTGCCCATTCA
AGACATTTGCCAAGAAAGCTGA

Upstream 100 bases:

>100_bases
TTCTAGCCGTCGTGGGCATGGCGATGCAGACAAACGGGGTCGTGACGGGCCTGCAAGTGCCGGTGGATGAGGCGTTTGAG
GCGAACTGAAAGGATGCATT

Downstream 100 bases:

>100_bases
ACGCCCATGCCCACCAAAATCCCCCGTAACGACTACGCTGCCATGTATGGTCCCACGACCGGGGACCGGGTCAGGCTCGC
GGATACGGACCTGATCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTDLPPRTVEDEIAYRVERAEFELRAEYEAETAKLIQSIRDEYASARKSFRFWTTTLGALALGLVVTWATNTITNRVDTA
IDGMRTELREEADTYMSDMRSALNSFASGEVDSQFRLERARFEQIREEEQTLTTLLPLVVGEAIDLDDEGFSPGSDSQTM
IFEALEVIGPEVLELDGFVFNLAARRLERILDTFWRRWEFHDLHIAFNRLPVELQERLLAHPGEGVLYTMANALTQEVIL
EGELPTNRRDIAARVYAQQPIPDGHAYRQIALLNLVERAADADWDAAFVLTETTEQQRRWNGFRSYAAQWQFCAAFARHI
ALEGALSDPVVQRLNTLVATANPVPIQDICQES

Sequences:

>Translated_353_residues
MTDLPPRTVEDEIAYRVERAEFELRAEYEAETAKLIQSIRDEYASARKSFRFWTTTLGALALGLVVTWATNTITNRVDTA
IDGMRTELREEADTYMSDMRSALNSFASGEVDSQFRLERARFEQIREEEQTLTTLLPLVVGEAIDLDDEGFSPGSDSQTM
IFEALEVIGPEVLELDGFVFNLAARRLERILDTFWRRWEFHDLHIAFNRLPVELQERLLAHPGEGVLYTMANALTQEVIL
EGELPTNRRDIAARVYAQQPIPDGHAYRQIALLNLVERAADADWDAAFVLTETTEQQRRWNGFRSYAAQWQFCAAFARHI
ALEGALSDPVVQRLNTLVATANPVPIQDICQES
>Mature_352_residues
TDLPPRTVEDEIAYRVERAEFELRAEYEAETAKLIQSIRDEYASARKSFRFWTTTLGALALGLVVTWATNTITNRVDTAI
DGMRTELREEADTYMSDMRSALNSFASGEVDSQFRLERARFEQIREEEQTLTTLLPLVVGEAIDLDDEGFSPGSDSQTMI
FEALEVIGPEVLELDGFVFNLAARRLERILDTFWRRWEFHDLHIAFNRLPVELQERLLAHPGEGVLYTMANALTQEVILE
GELPTNRRDIAARVYAQQPIPDGHAYRQIALLNLVERAADADWDAAFVLTETTEQQRRWNGFRSYAAQWQFCAAFARHIA
LEGALSDPVVQRLNTLVATANPVPIQDICQES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40176; Mature: 40044

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLPPRTVEDEIAYRVERAEFELRAEYEAETAKLIQSIRDEYASARKSFRFWTTTLGAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGLVVTWATNTITNRVDTAIDGMRTELREEADTYMSDMRSALNSFASGEVDSQFRLERA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RFEQIREEEQTLTTLLPLVVGEAIDLDDEGFSPGSDSQTMIFEALEVIGPEVLELDGFVF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
NLAARRLERILDTFWRRWEFHDLHIAFNRLPVELQERLLAHPGEGVLYTMANALTQEVIL
HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
EGELPTNRRDIAARVYAQQPIPDGHAYRQIALLNLVERAADADWDAAFVLTETTEQQRRW
CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH
NGFRSYAAQWQFCAAFARHIALEGALSDPVVQRLNTLVATANPVPIQDICQES
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCC
>Mature Secondary Structure 
TDLPPRTVEDEIAYRVERAEFELRAEYEAETAKLIQSIRDEYASARKSFRFWTTTLGAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGLVVTWATNTITNRVDTAIDGMRTELREEADTYMSDMRSALNSFASGEVDSQFRLERA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RFEQIREEEQTLTTLLPLVVGEAIDLDDEGFSPGSDSQTMIFEALEVIGPEVLELDGFVF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
NLAARRLERILDTFWRRWEFHDLHIAFNRLPVELQERLLAHPGEGVLYTMANALTQEVIL
HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
EGELPTNRRDIAARVYAQQPIPDGHAYRQIALLNLVERAADADWDAAFVLTETTEQQRRW
CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH
NGFRSYAAQWQFCAAFARHIALEGALSDPVVQRLNTLVATANPVPIQDICQES
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA