Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054199

Identifier: 89054199

GI number: 89054199

Start: 1690670

End: 1691125

Strand: Direct

Name: 89054199

Synonym: Jann_1708

Alternate gene names: NA

Gene position: 1690670-1691125 (Clockwise)

Preceding gene: 89054196

Following gene: 89054201

Centisome position: 39.15

GC content: 64.69

Gene sequence:

>456_bases
ATGCGTTTCATGATTTTTCTGGCCGGGGCCGCAATGGCCGCGAGCTACTTCGTCACCTGGGTGGAACCGCCCTTCGCGGG
GCAGGAGATCTCGCCCTCGGTCCTGATCGGCACCGATTTGCAGGCGATTATCACCGACGGGACCTGGCAGGCGCGGGTCT
TTGTGGGGGGCTTTGTCCTGGCGGCGCTCTGCGCGTTGCTGGGGGCGCTGGGGCGCACGGCGGGGCTGGTCGCGCTTCTG
GCCGGGGCATCGCCGGTGGTTCTTCTGGTCCATTACTACCTGCGGGCCGAGGATGTTCAGGCCGATCTGGGCCTGCCATT
TTCGGTGAATTTTCAGGATCTTGGGCAGGTCTATGAGCTGCTTGGCGACTTCCTGCGCGCAGGTCTGTGGATGTATGCAG
GCGGCGCGGCGGTTCTGCTGTTGGCGGGGATGAGTGTCACCTTCGGCAGGCGGTAG

Upstream 100 bases:

>100_bases
TCACGAAACGATCATACGTTTGTCACGGGGGATTGGACCGGCGGGCGGTTTTGCGTTAATTTGACGCCCAACGATAAGCA
AAAACGAGCGGAGCAGTCCT

Downstream 100 bases:

>100_bases
GTGGGCCCGGCGCTCAGATCCACGATGGGGCCAGCGCCACAATGGCAACAACCACGGCGCAGACCGGCACCAGGGCGCGT
CTGGACCGAGCCGCCGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MRFMIFLAGAAMAASYFVTWVEPPFAGQEISPSVLIGTDLQAIITDGTWQARVFVGGFVLAALCALLGALGRTAGLVALL
AGASPVVLLVHYYLRAEDVQADLGLPFSVNFQDLGQVYELLGDFLRAGLWMYAGGAAVLLLAGMSVTFGRR

Sequences:

>Translated_151_residues
MRFMIFLAGAAMAASYFVTWVEPPFAGQEISPSVLIGTDLQAIITDGTWQARVFVGGFVLAALCALLGALGRTAGLVALL
AGASPVVLLVHYYLRAEDVQADLGLPFSVNFQDLGQVYELLGDFLRAGLWMYAGGAAVLLLAGMSVTFGRR
>Mature_151_residues
MRFMIFLAGAAMAASYFVTWVEPPFAGQEISPSVLIGTDLQAIITDGTWQARVFVGGFVLAALCALLGALGRTAGLVALL
AGASPVVLLVHYYLRAEDVQADLGLPFSVNFQDLGQVYELLGDFLRAGLWMYAGGAAVLLLAGMSVTFGRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15989; Mature: 15989

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFMIFLAGAAMAASYFVTWVEPPFAGQEISPSVLIGTDLQAIITDGTWQARVFVGGFVL
CEEEEEEHHHHHHHHHHHEECCCCCCCCCCCCCEEECCCCEEEEECCCEEEHHHHHHHHH
AALCALLGALGRTAGLVALLAGASPVVLLVHYYLRAEDVQADLGLPFSVNFQDLGQVYEL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCCCCCEEECHHHHHHHHHH
LGDFLRAGLWMYAGGAAVLLLAGMSVTFGRR
HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRFMIFLAGAAMAASYFVTWVEPPFAGQEISPSVLIGTDLQAIITDGTWQARVFVGGFVL
CEEEEEEHHHHHHHHHHHEECCCCCCCCCCCCCEEECCCCEEEEECCCEEEHHHHHHHHH
AALCALLGALGRTAGLVALLAGASPVVLLVHYYLRAEDVQADLGLPFSVNFQDLGQVYEL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCCCCCEEECHHHHHHHHHH
LGDFLRAGLWMYAGGAAVLLLAGMSVTFGRR
HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA