| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054195
Identifier: 89054195
GI number: 89054195
Start: 1687113
End: 1687715
Strand: Direct
Name: 89054195
Synonym: Jann_1704
Alternate gene names: NA
Gene position: 1687113-1687715 (Clockwise)
Preceding gene: 89054193
Following gene: 89054196
Centisome position: 39.07
GC content: 67.16
Gene sequence:
>603_bases ATGGGCCACAACGCAACACTTCTTTCCGCAACGCTGGGGCAGGAGGGCCTGATCCGCAAGGCTCTGCTGGTTCTGGGCGG CACGATCTTCATCGCTTTGGCCGCGCGCACATCCGTGCCGATGGTCCCGGTCCCGATGACGCTGGGGACGCTGGCAATCT TGATGGTGGGCCTGTCCTACGGCTCGCGTCTGGGCGCCATCACCGTCCTCGCCTATCTGGCGCAGGGGGCCGCTGGCCTT CCGGTCTTTGCACCCACGACGATCATGGGACCGCTGGCCTTTGTCGGGCCCACCGCCGGGTTCCTCGTGGGCTATGTCGC GATGGCCTGGGCGGCCGGGTTCGCGGTTGAGCGGGGTCTGGCGAAGGGCTTCATCGGCATGGCGCTGACGGCCATTGCGA TCTCGGCCCTGCTCTACGTGCCCGGCATTGCCTGGCCCATGGGTGTCGCGAGCCCGTCCGGGGTCGAGGCCGGCTGGGTC GGCCAGGGCTTCGGGTATTACTGGACCTACTTCATCTCCAACTTCGTCATCGGCGATTCGGTGAAGGCGGTCATTGCCGC CCTGATCGTGACAGGCGGCTGGGCCGTGCTGGCGCGCCGCTAA
Upstream 100 bases:
>100_bases TCGCCGCCTGATGCCGCCTTGCACGTGCAAGTGCAAGGGGTATACCTTTGCGCCAACGGGCCTTTGCGCCCTGTCTGGAC AAGAATGGGGAGCCTCCACC
Downstream 100 bases:
>100_bases GCCAGAGGCAAGGGCGGGGATCCCGCCATGGATATGTCGCGACCGGTCCTGGAAAAGGGGCCGGTCGTTTTCGTTCTGGC CCTCTGATCGCGGGAGCAAC
Product: BioY protein
Products: NA
Alternate protein names: BioY Family Protein; Biotin Biosynthesis Protein BioY; Biotin Synthase; Biotin Transporter BioY; Na+/H+ Antiporter; Bioy Protein
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MGHNATLLSATLGQEGLIRKALLVLGGTIFIALAARTSVPMVPVPMTLGTLAILMVGLSYGSRLGAITVLAYLAQGAAGL PVFAPTTIMGPLAFVGPTAGFLVGYVAMAWAAGFAVERGLAKGFIGMALTAIAISALLYVPGIAWPMGVASPSGVEAGWV GQGFGYYWTYFISNFVIGDSVKAVIAALIVTGGWAVLARR
Sequences:
>Translated_200_residues MGHNATLLSATLGQEGLIRKALLVLGGTIFIALAARTSVPMVPVPMTLGTLAILMVGLSYGSRLGAITVLAYLAQGAAGL PVFAPTTIMGPLAFVGPTAGFLVGYVAMAWAAGFAVERGLAKGFIGMALTAIAISALLYVPGIAWPMGVASPSGVEAGWV GQGFGYYWTYFISNFVIGDSVKAVIAALIVTGGWAVLARR >Mature_199_residues GHNATLLSATLGQEGLIRKALLVLGGTIFIALAARTSVPMVPVPMTLGTLAILMVGLSYGSRLGAITVLAYLAQGAAGLP VFAPTTIMGPLAFVGPTAGFLVGYVAMAWAAGFAVERGLAKGFIGMALTAIAISALLYVPGIAWPMGVASPSGVEAGWVG QGFGYYWTYFISNFVIGDSVKAVIAALIVTGGWAVLARR
Specific function: Unknown
COG id: COG1268
COG function: function code R; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20392; Mature: 20260
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHNATLLSATLGQEGLIRKALLVLGGTIFIALAARTSVPMVPVPMTLGTLAILMVGLSY CCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC GSRLGAITVLAYLAQGAAGLPVFAPTTIMGPLAFVGPTAGFLVGYVAMAWAAGFAVERGL CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AKGFIGMALTAIAISALLYVPGIAWPMGVASPSGVEAGWVGQGFGYYWTYFISNFVIGDS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCH VKAVIAALIVTGGWAVLARR HHHHHHHHHHHCCHHEEECC >Mature Secondary Structure GHNATLLSATLGQEGLIRKALLVLGGTIFIALAARTSVPMVPVPMTLGTLAILMVGLSY CCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC GSRLGAITVLAYLAQGAAGLPVFAPTTIMGPLAFVGPTAGFLVGYVAMAWAAGFAVERGL CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AKGFIGMALTAIAISALLYVPGIAWPMGVASPSGVEAGWVGQGFGYYWTYFISNFVIGDS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCH VKAVIAALIVTGGWAVLARR HHHHHHHHHHHCCHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA