Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054167

Identifier: 89054167

GI number: 89054167

Start: 1660015

End: 1661238

Strand: Reverse

Name: 89054167

Synonym: Jann_1676

Alternate gene names: NA

Gene position: 1661238-1660015 (Counterclockwise)

Preceding gene: 89054168

Following gene: 89054166

Centisome position: 38.47

GC content: 63.89

Gene sequence:

>1224_bases
ATGTTTCGCGCCCCCCTCTTGGCATCTGTTGCCGCGTTAACCCTCATATCCGCGCCCCTGTCCGCGCAAACCGTCGACGC
CCAACGCCAGGCCGTGTTCCAGCAAATGCTCTCGGACCCCGGCAACCGCGAGCTGATGCGGGATTATGCCCGCCTGTCGG
TGGAGGCCCGCGATTTTGAGGCCGCCGCCGCCACGCTGGAGCGTCTCGTCGATCAGGAACCCGAAAATGTCAGCGCCCGG
GTGGAGCTGGCCGTGGCCTATTTCGCCCTCGGCTCCTACGCGGTGGCCGAGTATCATCTGGCGGCGGCTGAGGCCTCTGG
CGCGCTGGCACCCGCTCAGGCCGCGCAAGTCGCCCGCTACCGCGAAGAGGCCCAGGACCGCGACGACGGATCAGCCTACT
CTGGCCGTCTGGCCGTCGGATATGCCTATGCCGACACCTCCGACGAAAGCGGCGCCTTTGTCAGCGGCTCGGTCGACTGG
CGCCTCGATCTGGGCAATGCTAATGTCACGCAATGGGTCACCGAGTTTGCCTTCACCAGCTATCAGCCGGGCGACGCCTC
CATCAACGGGCGCAATGTGGCGCGCCTGCGCACGGGTCCTGAATGGCGGCTGTCGGGCGATGCATACGGGCCGCGCCTGC
AAGCCTACGGTGAACTGGAATATTTCCAGAACGACGATCTGCTGCCGGGCGATTATACGTCGTGGGCCGCGGGCCTCGCC
TACGCGAACCCGATCAATGAGATGATCACGGTCTACGCCGACCTCAGCACAGGCCGTGAAGTGGCAAACGATGCTGCGGA
TGCGGACTTCGACTTCACCGAATTTGATCTGGGCATCACCTACCGCCCCTCTCGCGACACGCGCCTGCGTCTGTCCGGCA
CGTGGAACACGCGCAATCAGGTCGACGCCGCAACGCCCTTTGACTTCACCGGGTCCGCTATCCGCCTGTCGGCGCAGCAT
GCCTTTGATATCGGGTGGGAGGCCTTGCCAAATCGCTGGGTTGTGGGCGCGTTCGCCGAGGCGGGCCAGCTGGAGCGCAA
CGACGCCGGCACGATCACCGAGTTCGACGAACAAAGCTATGGCGTGTTGCTGCGGGCCTTCGTCTTTGAAGACATCTTCA
TCGAAACCGCCGCCGCGCAGGTCAATGAAGATACTCTGTCGGGCGGCACCACCACAACGCGCGAAGAGATGATTTACACG
TTCCAAGTCGGTTGGGAGTTCTGA

Upstream 100 bases:

>100_bases
CGTGCCGACAGGGGTGGGCGCTTTATTGTATAATGTGCCTTGCCCGACTACCGTCTGCGCAATTCAGGTGATTTTCATTT
TGTACGTGAGGCCCCAAGCC

Downstream 100 bases:

>100_bases
GCATGCCCTTCAAGACATTCAAGATCGCCGCAGTGGCGGCCCTCGCCCTTGCGGCCCCGTTTGCAGCCCCGGTCGCCGCG
CAAAACATCGGGACCGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MFRAPLLASVAALTLISAPLSAQTVDAQRQAVFQQMLSDPGNRELMRDYARLSVEARDFEAAAATLERLVDQEPENVSAR
VELAVAYFALGSYAVAEYHLAAAEASGALAPAQAAQVARYREEAQDRDDGSAYSGRLAVGYAYADTSDESGAFVSGSVDW
RLDLGNANVTQWVTEFAFTSYQPGDASINGRNVARLRTGPEWRLSGDAYGPRLQAYGELEYFQNDDLLPGDYTSWAAGLA
YANPINEMITVYADLSTGREVANDAADADFDFTEFDLGITYRPSRDTRLRLSGTWNTRNQVDAATPFDFTGSAIRLSAQH
AFDIGWEALPNRWVVGAFAEAGQLERNDAGTITEFDEQSYGVLLRAFVFEDIFIETAAAQVNEDTLSGGTTTTREEMIYT
FQVGWEF

Sequences:

>Translated_407_residues
MFRAPLLASVAALTLISAPLSAQTVDAQRQAVFQQMLSDPGNRELMRDYARLSVEARDFEAAAATLERLVDQEPENVSAR
VELAVAYFALGSYAVAEYHLAAAEASGALAPAQAAQVARYREEAQDRDDGSAYSGRLAVGYAYADTSDESGAFVSGSVDW
RLDLGNANVTQWVTEFAFTSYQPGDASINGRNVARLRTGPEWRLSGDAYGPRLQAYGELEYFQNDDLLPGDYTSWAAGLA
YANPINEMITVYADLSTGREVANDAADADFDFTEFDLGITYRPSRDTRLRLSGTWNTRNQVDAATPFDFTGSAIRLSAQH
AFDIGWEALPNRWVVGAFAEAGQLERNDAGTITEFDEQSYGVLLRAFVFEDIFIETAAAQVNEDTLSGGTTTTREEMIYT
FQVGWEF
>Mature_407_residues
MFRAPLLASVAALTLISAPLSAQTVDAQRQAVFQQMLSDPGNRELMRDYARLSVEARDFEAAAATLERLVDQEPENVSAR
VELAVAYFALGSYAVAEYHLAAAEASGALAPAQAAQVARYREEAQDRDDGSAYSGRLAVGYAYADTSDESGAFVSGSVDW
RLDLGNANVTQWVTEFAFTSYQPGDASINGRNVARLRTGPEWRLSGDAYGPRLQAYGELEYFQNDDLLPGDYTSWAAGLA
YANPINEMITVYADLSTGREVANDAADADFDFTEFDLGITYRPSRDTRLRLSGTWNTRNQVDAATPFDFTGSAIRLSAQH
AFDIGWEALPNRWVVGAFAEAGQLERNDAGTITEFDEQSYGVLLRAFVFEDIFIETAAAQVNEDTLSGGTTTTREEMIYT
FQVGWEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44597; Mature: 44597

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRAPLLASVAALTLISAPLSAQTVDAQRQAVFQQMLSDPGNRELMRDYARLSVEARDFE
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHH
AAAATLERLVDQEPENVSARVELAVAYFALGSYAVAEYHLAAAEASGALAPAQAAQVARY
HHHHHHHHHHCCCCCCCCHHEEHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
REEAQDRDDGSAYSGRLAVGYAYADTSDESGAFVSGSVDWRLDLGNANVTQWVTEFAFTS
HHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHHCC
YQPGDASINGRNVARLRTGPEWRLSGDAYGPRLQAYGELEYFQNDDLLPGDYTSWAAGLA
CCCCCCCCCCCEEEEEECCCCEEECCCCCCCCEEECCCEEEECCCCCCCCCCHHHHHHHH
YANPINEMITVYADLSTGREVANDAADADFDFTEFDLGITYRPSRDTRLRLSGTWNTRNQ
HHCCHHHHEEEEECCCCCHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCC
VDAATPFDFTGSAIRLSAQHAFDIGWEALPNRWVVGAFAEAGQLERNDAGTITEFDEQSY
CCCCCCCCCCCCEEEEECCHHHHCCHHHCCCCEEEEEHHHCCCCCCCCCCCEEECCCCHH
GVLLRAFVFEDIFIETAAAQVNEDTLSGGTTTTREEMIYTFQVGWEF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEEECCC
>Mature Secondary Structure
MFRAPLLASVAALTLISAPLSAQTVDAQRQAVFQQMLSDPGNRELMRDYARLSVEARDFE
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHH
AAAATLERLVDQEPENVSARVELAVAYFALGSYAVAEYHLAAAEASGALAPAQAAQVARY
HHHHHHHHHHCCCCCCCCHHEEHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
REEAQDRDDGSAYSGRLAVGYAYADTSDESGAFVSGSVDWRLDLGNANVTQWVTEFAFTS
HHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHHCC
YQPGDASINGRNVARLRTGPEWRLSGDAYGPRLQAYGELEYFQNDDLLPGDYTSWAAGLA
CCCCCCCCCCCEEEEEECCCCEEECCCCCCCCEEECCCEEEECCCCCCCCCCHHHHHHHH
YANPINEMITVYADLSTGREVANDAADADFDFTEFDLGITYRPSRDTRLRLSGTWNTRNQ
HHCCHHHHEEEEECCCCCHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCC
VDAATPFDFTGSAIRLSAQHAFDIGWEALPNRWVVGAFAEAGQLERNDAGTITEFDEQSY
CCCCCCCCCCCCEEEEECCHHHHCCHHHCCCCEEEEEHHHCCCCCCCCCCCEEECCCCHH
GVLLRAFVFEDIFIETAAAQVNEDTLSGGTTTTREEMIYTFQVGWEF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA