Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054129

Identifier: 89054129

GI number: 89054129

Start: 1624371

End: 1624781

Strand: Direct

Name: 89054129

Synonym: Jann_1638

Alternate gene names: NA

Gene position: 1624371-1624781 (Clockwise)

Preceding gene: 89054128

Following gene: 89054130

Centisome position: 37.62

GC content: 64.23

Gene sequence:

>411_bases
ATGAGCTACGCTGCCACAGCCGCCTTGCAGGAGGCCGTATACACGGCGCTGACGTCGGACGCCGCTGTCAGCACGTTGAC
GGATGGTGCGATCTACGACGCGCTGCCGCCGGGCCCGGTCCCGTCCATCTACGTGAGCCTTGGGCCTGAGCGGGTCAAAG
ATGCTTCAGACGTTGTGGGCGATGGGTCGGTGCATGATTTTCCGGTCACTGTCATCTCAGACACGGCCGGATTTCACACG
GCCAAGACGATTGCCGCAGCGGTGTCCGATGCGCTCACGGGGTCTGCCATGACCCTGTCGCGTGGCACTCTCACAGGCCT
TAACTTTCTGCGCGCCCGCGCCCGGCGGGTCGGGGACGGACGCGAAATCGAAGTCTGGTTTCGCGCCTTCATCGATTCCG
GCGGCGCATGA

Upstream 100 bases:

>100_bases
GGTTTCGGGATGTTGAGCGCCTCTACCGCATTGAGGCGGTGACCGAGGCCGAGGCGGCGGGCCGCTATCTGGTGTGCTTT
GCGAAAGAGGAGGTGGGCGC

Downstream 100 bases:

>100_bases
TCGCCACCCCTACACATCTTTGACAATACTGGAGATTTTCCATGACAGCACAGAACGGCAAGGACCTTCTTGTGAAGGTA
GATATGGACGGCAATGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSYAATAALQEAVYTALTSDAAVSTLTDGAIYDALPPGPVPSIYVSLGPERVKDASDVVGDGSVHDFPVTVISDTAGFHT
AKTIAAAVSDALTGSAMTLSRGTLTGLNFLRARARRVGDGREIEVWFRAFIDSGGA

Sequences:

>Translated_136_residues
MSYAATAALQEAVYTALTSDAAVSTLTDGAIYDALPPGPVPSIYVSLGPERVKDASDVVGDGSVHDFPVTVISDTAGFHT
AKTIAAAVSDALTGSAMTLSRGTLTGLNFLRARARRVGDGREIEVWFRAFIDSGGA
>Mature_135_residues
SYAATAALQEAVYTALTSDAAVSTLTDGAIYDALPPGPVPSIYVSLGPERVKDASDVVGDGSVHDFPVTVISDTAGFHTA
KTIAAAVSDALTGSAMTLSRGTLTGLNFLRARARRVGDGREIEVWFRAFIDSGGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14007; Mature: 13876

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYAATAALQEAVYTALTSDAAVSTLTDGAIYDALPPGPVPSIYVSLGPERVKDASDVVG
CCCHHHHHHHHHHHHHHHCCHHHHHHCCCCEECCCCCCCCCEEEEECCHHHHHHHHHHCC
DGSVHDFPVTVISDTAGFHTAKTIAAAVSDALTGSAMTLSRGTLTGLNFLRARARRVGDG
CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCC
REIEVWFRAFIDSGGA
CCHHHHHHHHHCCCCC
>Mature Secondary Structure 
SYAATAALQEAVYTALTSDAAVSTLTDGAIYDALPPGPVPSIYVSLGPERVKDASDVVG
CCHHHHHHHHHHHHHHHCCHHHHHHCCCCEECCCCCCCCCEEEEECCHHHHHHHHHHCC
DGSVHDFPVTVISDTAGFHTAKTIAAAVSDALTGSAMTLSRGTLTGLNFLRARARRVGDG
CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCC
REIEVWFRAFIDSGGA
CCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA