Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054123

Identifier: 89054123

GI number: 89054123

Start: 1620105

End: 1621265

Strand: Direct

Name: 89054123

Synonym: Jann_1632

Alternate gene names: NA

Gene position: 1620105-1621265 (Clockwise)

Preceding gene: 89054122

Following gene: 89054124

Centisome position: 37.52

GC content: 64.08

Gene sequence:

>1161_bases
ATGGTATTGGATTTCCTAAAGAAATCTACACCCGCTGCACCGGAAGCCAAGGCATCCGCTAGTGCGAAGCTGGCGGTCTG
GGGATCGTCGGGCCGCGTGGTGTGGAGCCCCCGTGACGTGGGCTCTTTGACGAAGAACGGGTTTCTGGGCAACCCGGTGG
GCTTTCGCGCCGTCAAGGTGATTGCCGAGGCCGCCGCGGCCCTGCCGGTGATCTGCCGAGATGCGGAGCGCCGGTTTGAG
GTTCACCCGGTTCTGTCGCTTCTCAACCGCCCCAACGCTGGTCAGACCCGCGCGGATCTGCTGGAAGCGGCCTTCGCGCA
ATTGATGCTGTCTGGCAATGCCTACGTCGAGGCCTTGATGCCGGAAGAGGGCTATCCGGCGGAGTTGCACGTGCTTCGGT
CGGATCGGATGAGCCTGATCCCCGGTGCGGATGGGTGGCCGAAAGCCTACGACTACACGGTCGGCGCGCGCAGCCACCGC
TACCCGGCGGAACTGATCTGCCACATCCGCAACTTCCACCCGCAAGATGACCACCACGGACTTGCACCGATCCAGGCGGC
AGCGACCGCGATTGACGTCCATAATTCCGCCGCGCGGTGGTCCAAGGCGCTGCTGGACAATGCCGCTCGGCCATCAGGAG
CCATTGTTTACAACGGCTTGGAGGGTGCTGGTACGATGAGTCAGGACCAGTTCGACCGCCTGCAGATGGAGCTGGAAAGC
CACCACCAGGGCGCACGGAACGCGGGCCGTCCGATGTTGTTGGAAGGCGGGTTGGACTGGAAACCGATGGGGTTCAGCCC
ATCCGACATGGAATTCCAGAAGACCAAAGACGCCGCAGCGCGGGATATTGCGCTGGCGTTCGGTGTGCCGCCGATGCTTC
TGGGCATCCCCGGTGACGCGACCTACGCCAATTATGCGGAGGCCAATCGGGCGTTCTATCGCCTGACGGTTCTGCCCTTG
GCCGAGCGCGTCTGGTCATCGATGTCGCACTGGCTCTCGGGCCTTGCAGGCGACTTGGTGGAGGTCAAGCCGGACCTTGA
CGGCGTGCCCGCGCTGGCCGCCGAGCGCGAGGCACAATGGCGCCGCGTCAGTGAAGCGACGTTCCTGACAGACGTGGAGA
AGCGACGACTGCTGGGGCTGCCGGAGCAGCCCGAGACATGA

Upstream 100 bases:

>100_bases
GAAACCTTTGACACGAATGAAACGGGCCGCGTCGGGCGGCTATGGAGCGGGAGGCGATAGGCCTACCTGCTCTTCATGTA
TGACTTGAGGAGAGGCTCAC

Downstream 100 bases:

>100_bases
GCGAGCCGCGCGGCGGCGGCGGCTCTCGCTACCTCTACGCGCCATTCGACGCTGCCAACGCGCAGATCGAAGCCAACGAG
CGTGTGCAGCAGGAGCGCTG

Product: Phage portal protein, HK97

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MVLDFLKKSTPAAPEAKASASAKLAVWGSSGRVVWSPRDVGSLTKNGFLGNPVGFRAVKVIAEAAAALPVICRDAERRFE
VHPVLSLLNRPNAGQTRADLLEAAFAQLMLSGNAYVEALMPEEGYPAELHVLRSDRMSLIPGADGWPKAYDYTVGARSHR
YPAELICHIRNFHPQDDHHGLAPIQAAATAIDVHNSAARWSKALLDNAARPSGAIVYNGLEGAGTMSQDQFDRLQMELES
HHQGARNAGRPMLLEGGLDWKPMGFSPSDMEFQKTKDAAARDIALAFGVPPMLLGIPGDATYANYAEANRAFYRLTVLPL
AERVWSSMSHWLSGLAGDLVEVKPDLDGVPALAAEREAQWRRVSEATFLTDVEKRRLLGLPEQPET

Sequences:

>Translated_386_residues
MVLDFLKKSTPAAPEAKASASAKLAVWGSSGRVVWSPRDVGSLTKNGFLGNPVGFRAVKVIAEAAAALPVICRDAERRFE
VHPVLSLLNRPNAGQTRADLLEAAFAQLMLSGNAYVEALMPEEGYPAELHVLRSDRMSLIPGADGWPKAYDYTVGARSHR
YPAELICHIRNFHPQDDHHGLAPIQAAATAIDVHNSAARWSKALLDNAARPSGAIVYNGLEGAGTMSQDQFDRLQMELES
HHQGARNAGRPMLLEGGLDWKPMGFSPSDMEFQKTKDAAARDIALAFGVPPMLLGIPGDATYANYAEANRAFYRLTVLPL
AERVWSSMSHWLSGLAGDLVEVKPDLDGVPALAAEREAQWRRVSEATFLTDVEKRRLLGLPEQPET
>Mature_386_residues
MVLDFLKKSTPAAPEAKASASAKLAVWGSSGRVVWSPRDVGSLTKNGFLGNPVGFRAVKVIAEAAAALPVICRDAERRFE
VHPVLSLLNRPNAGQTRADLLEAAFAQLMLSGNAYVEALMPEEGYPAELHVLRSDRMSLIPGADGWPKAYDYTVGARSHR
YPAELICHIRNFHPQDDHHGLAPIQAAATAIDVHNSAARWSKALLDNAARPSGAIVYNGLEGAGTMSQDQFDRLQMELES
HHQGARNAGRPMLLEGGLDWKPMGFSPSDMEFQKTKDAAARDIALAFGVPPMLLGIPGDATYANYAEANRAFYRLTVLPL
AERVWSSMSHWLSGLAGDLVEVKPDLDGVPALAAEREAQWRRVSEATFLTDVEKRRLLGLPEQPET

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. HK97 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006427 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 41991; Mature: 41991

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLDFLKKSTPAAPEAKASASAKLAVWGSSGRVVWSPRDVGSLTKNGFLGNPVGFRAVKV
CCCHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCHHHCCCCCCCCHHHHHHHH
IAEAAAALPVICRDAERRFEVHPVLSLLNRPNAGQTRADLLEAAFAQLMLSGNAYVEALM
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
PEEGYPAELHVLRSDRMSLIPGADGWPKAYDYTVGARSHRYPAELICHIRNFHPQDDHHG
CCCCCCCEEEEEECCCEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCC
LAPIQAAATAIDVHNSAARWSKALLDNAARPSGAIVYNGLEGAGTMSQDQFDRLQMELES
CCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH
HHQGARNAGRPMLLEGGLDWKPMGFSPSDMEFQKTKDAAARDIALAFGVPPMLLGIPGDA
HHCCHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
TYANYAEANRAFYRLTVLPLAERVWSSMSHWLSGLAGDLVEVKPDLDGVPALAAEREAQW
CCCHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHH
RRVSEATFLTDVEKRRLLGLPEQPET
HHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVLDFLKKSTPAAPEAKASASAKLAVWGSSGRVVWSPRDVGSLTKNGFLGNPVGFRAVKV
CCCHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCHHHCCCCCCCCHHHHHHHH
IAEAAAALPVICRDAERRFEVHPVLSLLNRPNAGQTRADLLEAAFAQLMLSGNAYVEALM
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
PEEGYPAELHVLRSDRMSLIPGADGWPKAYDYTVGARSHRYPAELICHIRNFHPQDDHHG
CCCCCCCEEEEEECCCEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCC
LAPIQAAATAIDVHNSAARWSKALLDNAARPSGAIVYNGLEGAGTMSQDQFDRLQMELES
CCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH
HHQGARNAGRPMLLEGGLDWKPMGFSPSDMEFQKTKDAAARDIALAFGVPPMLLGIPGDA
HHCCHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
TYANYAEANRAFYRLTVLPLAERVWSSMSHWLSGLAGDLVEVKPDLDGVPALAAEREAQW
CCCHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHH
RRVSEATFLTDVEKRRLLGLPEQPET
HHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA