Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054114

Identifier: 89054114

GI number: 89054114

Start: 1610548

End: 1611426

Strand: Direct

Name: 89054114

Synonym: Jann_1623

Alternate gene names: NA

Gene position: 1610548-1611426 (Clockwise)

Preceding gene: 89054109

Following gene: 89054115

Centisome position: 37.3

GC content: 61.66

Gene sequence:

>879_bases
GTGGCGTACCAGAAGTTTTTGAAGAATGAACATGGCGCCGCGACGGTCGATTGGGTTGTCGTGATGGCGGCGCTTGTTGG
CCTGGGCGTGGCGGTGACGAACCAGACAGATGCCGCCCTGACCACGGAATCGCAGAACATTCAGGGTGAATTTCAAAACG
GCATGTTCGAGACCGCATGGGACAGCTCATTGGCCGTCCAGCCGGATCAGGATGCCGGCACCACGTGCACGGGCGGCACG
TCCTGCGATCCGGGCACGGGCAGTGGGGGCACCACCCTTTGGACCGGAACGACGACGGACCCCGATCCGGACCCCGATCC
CGATCCCGACCCAACGCCGGATCCCGACCCCGATCCAACGCCGGATCCTGATCCCGATCCGACGACCGACCCGGATCCTG
ATCCGGACCCCGATCCTGACCCCGATCCCACACCGGAACCGGCAAGCGCGCCTGCGGCAGGCTGCCCGTCGACCAACTAT
TTCGGCGTGCCGATCGCATCGGACGGCTCGGACTTTGGCAACAACAACGATTACACGCTCCGCACCAGCGGCTACACTAA
CCTGCGCTCCTGCTCAGGCTTGCCGAACAGACGCGGTTTCTTCGACGCCAACCCATCGTTCACGCTGACGCTGAGCGACA
TGGAGCAGTTCAATCGGGTGCAGTTCCTGATCGAATCGACCAATTGCGACACCACGCTGCTGATCCGCGATGCGTCGGGC
ACGTTCCACTTCAACGACGATTTCAACTTCCCGACGCACACACGATCCCGGTTGATCCTGAATGACACTGCCAGCCTGAA
TGGTCGTGTCGACATCTGGATCGGGCGGTATAATCCGGGGCAGTGTATTTCGACGCTGGAAATCCGCGAACGCAACTAG

Upstream 100 bases:

>100_bases
ATGCCGGGTGAGCGGGTGATGAGGGGCATTTCAGCCCTTATCATCACTATAATTTCAAGGGCGCACGCGCCCCCGCAGGA
CCAGAAACGGAGGCCCTCCC

Downstream 100 bases:

>100_bases
CCGCCTGCGCTACTGAACGGCGTGCACCGGTGGGGTCCCTGTCGACGGGGCCCCACCGTCTTGCGTTGCGAAAGGCCTGC
GGCTCCTGTAGCTCCTGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MAYQKFLKNEHGAATVDWVVVMAALVGLGVAVTNQTDAALTTESQNIQGEFQNGMFETAWDSSLAVQPDQDAGTTCTGGT
SCDPGTGSGGTTLWTGTTTDPDPDPDPDPDPTPDPDPDPTPDPDPDPTTDPDPDPDPDPDPDPTPEPASAPAAGCPSTNY
FGVPIASDGSDFGNNNDYTLRTSGYTNLRSCSGLPNRRGFFDANPSFTLTLSDMEQFNRVQFLIESTNCDTTLLIRDASG
TFHFNDDFNFPTHTRSRLILNDTASLNGRVDIWIGRYNPGQCISTLEIRERN

Sequences:

>Translated_292_residues
MAYQKFLKNEHGAATVDWVVVMAALVGLGVAVTNQTDAALTTESQNIQGEFQNGMFETAWDSSLAVQPDQDAGTTCTGGT
SCDPGTGSGGTTLWTGTTTDPDPDPDPDPDPTPDPDPDPTPDPDPDPTTDPDPDPDPDPDPDPTPEPASAPAAGCPSTNY
FGVPIASDGSDFGNNNDYTLRTSGYTNLRSCSGLPNRRGFFDANPSFTLTLSDMEQFNRVQFLIESTNCDTTLLIRDASG
TFHFNDDFNFPTHTRSRLILNDTASLNGRVDIWIGRYNPGQCISTLEIRERN
>Mature_291_residues
AYQKFLKNEHGAATVDWVVVMAALVGLGVAVTNQTDAALTTESQNIQGEFQNGMFETAWDSSLAVQPDQDAGTTCTGGTS
CDPGTGSGGTTLWTGTTTDPDPDPDPDPDPTPDPDPDPTPDPDPDPTTDPDPDPDPDPDPDPTPEPASAPAAGCPSTNYF
GVPIASDGSDFGNNNDYTLRTSGYTNLRSCSGLPNRRGFFDANPSFTLTLSDMEQFNRVQFLIESTNCDTTLLIRDASGT
FHFNDDFNFPTHTRSRLILNDTASLNGRVDIWIGRYNPGQCISTLEIRERN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31347; Mature: 31216

Theoretical pI: Translated: 3.74; Mature: 3.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYQKFLKNEHGAATVDWVVVMAALVGLGVAVTNQTDAALTTESQNIQGEFQNGMFETAW
CCHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCCCCHHHCCEEEECC
DSSLAVQPDQDAGTTCTGGTSCDPGTGSGGTTLWTGTTTDPDPDPDPDPDPTPDPDPDPT
CCCEEECCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDPDPDPTTDPDPDPDPDPDPDPTPEPASAPAAGCPSTNYFGVPIASDGSDFGNNNDYTL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEE
RTSGYTNLRSCSGLPNRRGFFDANPSFTLTLSDMEQFNRVQFLIESTNCDTTLLIRDASG
EECCCCCHHHHCCCCCCCCEEECCCCEEEEEHHHHHCCEEEEEEECCCCCEEEEEEECCC
TFHFNDDFNFPTHTRSRLILNDTASLNGRVDIWIGRYNPGQCISTLEIRERN
EEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEECCC
>Mature Secondary Structure 
AYQKFLKNEHGAATVDWVVVMAALVGLGVAVTNQTDAALTTESQNIQGEFQNGMFETAW
CHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCCCCHHHCCEEEECC
DSSLAVQPDQDAGTTCTGGTSCDPGTGSGGTTLWTGTTTDPDPDPDPDPDPTPDPDPDPT
CCCEEECCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDPDPDPTTDPDPDPDPDPDPDPTPEPASAPAAGCPSTNYFGVPIASDGSDFGNNNDYTL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEE
RTSGYTNLRSCSGLPNRRGFFDANPSFTLTLSDMEQFNRVQFLIESTNCDTTLLIRDASG
EECCCCCHHHHCCCCCCCCEEECCCCEEEEEHHHHHCCEEEEEEECCCCCEEEEEEECCC
TFHFNDDFNFPTHTRSRLILNDTASLNGRVDIWIGRYNPGQCISTLEIRERN
EEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA