| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054095
Identifier: 89054095
GI number: 89054095
Start: 1587959
End: 1588531
Strand: Direct
Name: 89054095
Synonym: Jann_1604
Alternate gene names: NA
Gene position: 1587959-1588531 (Clockwise)
Preceding gene: 89054094
Following gene: 89054096
Centisome position: 36.78
GC content: 65.1
Gene sequence:
>573_bases ATGATTGTGCAGGCAGGCGACGATTGGTCATTGGGAGAGGTGCAATCGCTCTGCGTGAAGGCGGCGCGCGGGGCCGGGCG TGCGGTTGGTCTGGCCGAAGATGCAGGCCGGGCGGCGCGCTGGCTTCACGCTCGGGGTCAGGACGGGACAGGGGCGTTGG CACGGCTTTTGCAGGCCACGGATGGGCTGCCAGTCTCAAAACTGGTGCCGCGTTTGCCGGATTTCAGCCCGGCGCATGAG GGGATTTGCCCCCTGGTCCTTGGGGGGTACCTGTCGGATATGGGAACTTTGCCAAGCGGTCCCATCGGTCCGGTTTGGTC GCCTGAACTGTTGCAGCCGTTGCTCGCGAACCTCTCGGCCTCGGGTGTCGATGTCGTGTTCCCGCCAAGTGTGCACGAGC CGGTTACGGCGCGAATGATGCCGCGCATGACGATGCTCAACCCCAGCCAATCCCGTGCCGAGGTATCCCCCGAGACAATG GATGCGCTTCTTGTCTTCGCCGCCCGGACCTATGCGCCCGCCACCGCGCAAAGCCGTGCCGGGGCAGGGTCGGCTCTGTC GGATAACGATTAG
Upstream 100 bases:
>100_bases GGCTGCGCATCACCATGTTTCAGAACGCGCCCTACCCGGAAGACCTGGCCCAGGTCGACCCCGATGGCTGGAGTTACCCT TCGTTGAACGAGGTCGGGGC
Downstream 100 bases:
>100_bases GGTAAGGCCCGCTTGCACGTCCGCTCCATGGTGCACTTCCCCAAAACCATCTCAAGACAATCCCGTGAAACCGAAGATCT CGGGGAGGGTCGGATGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MIVQAGDDWSLGEVQSLCVKAARGAGRAVGLAEDAGRAARWLHARGQDGTGALARLLQATDGLPVSKLVPRLPDFSPAHE GICPLVLGGYLSDMGTLPSGPIGPVWSPELLQPLLANLSASGVDVVFPPSVHEPVTARMMPRMTMLNPSQSRAEVSPETM DALLVFAARTYAPATAQSRAGAGSALSDND
Sequences:
>Translated_190_residues MIVQAGDDWSLGEVQSLCVKAARGAGRAVGLAEDAGRAARWLHARGQDGTGALARLLQATDGLPVSKLVPRLPDFSPAHE GICPLVLGGYLSDMGTLPSGPIGPVWSPELLQPLLANLSASGVDVVFPPSVHEPVTARMMPRMTMLNPSQSRAEVSPETM DALLVFAARTYAPATAQSRAGAGSALSDND >Mature_190_residues MIVQAGDDWSLGEVQSLCVKAARGAGRAVGLAEDAGRAARWLHARGQDGTGALARLLQATDGLPVSKLVPRLPDFSPAHE GICPLVLGGYLSDMGTLPSGPIGPVWSPELLQPLLANLSASGVDVVFPPSVHEPVTARMMPRMTMLNPSQSRAEVSPETM DALLVFAARTYAPATAQSRAGAGSALSDND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19706; Mature: 19706
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVQAGDDWSLGEVQSLCVKAARGAGRAVGLAEDAGRAARWLHARGQDGTGALARLLQAT CEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH DGLPVSKLVPRLPDFSPAHEGICPLVLGGYLSDMGTLPSGPIGPVWSPELLQPLLANLSA CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC SGVDVVFPPSVHEPVTARMMPRMTMLNPSQSRAEVSPETMDALLVFAARTYAPATAQSRA CCCEEEECCCCCCCHHHHHCCHHHHCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCHHHCC GAGSALSDND CCCCCCCCCC >Mature Secondary Structure MIVQAGDDWSLGEVQSLCVKAARGAGRAVGLAEDAGRAARWLHARGQDGTGALARLLQAT CEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH DGLPVSKLVPRLPDFSPAHEGICPLVLGGYLSDMGTLPSGPIGPVWSPELLQPLLANLSA CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC SGVDVVFPPSVHEPVTARMMPRMTMLNPSQSRAEVSPETMDALLVFAARTYAPATAQSRA CCCEEEECCCCCCCHHHHHCCHHHHCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCHHHCC GAGSALSDND CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA