| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054090
Identifier: 89054090
GI number: 89054090
Start: 1582422
End: 1582841
Strand: Direct
Name: 89054090
Synonym: Jann_1599
Alternate gene names: NA
Gene position: 1582422-1582841 (Clockwise)
Preceding gene: 89054089
Following gene: 89054091
Centisome position: 36.65
GC content: 60.71
Gene sequence:
>420_bases ATGACGGGCCTCAAGCGTCCTCTCAGACCACCTGACTGGTCCGATACCCATGCGGCGCCCCTGCGCGCCGAGCTGACAAC GGCGCGCGCGGCCTACGAGGTGGCGCTTGGCCAACTGCCGCCCTGGACGCGCCGGGCGATGACTATCCGCAATGCCATCG TGGGCCGATTGGGCCTGAGAACCCCGGACATGCAGCAGGGAATGGCGGATCTGCCCATCGTAGCCGAGAGTGATGAGAGC TATGAACTTGGCCTCATCGACCGCCACCTGACCTTCACGCTACAGACGATTGTGGAAGATGACATCGCGCGCCTGACCAC GCGGATCTGGTTCAACCATTGGACCGGGCGGCTTTATCTGGCGCTTGTCTTGATCCCACATAAAATCATTGTAAAACTCG CACTTAGGAGGTTGGCATGA
Upstream 100 bases:
>100_bases ACCAGGGGGCCACCATCGTTGGCGGCTGTTGTGAAGTCGGCCCCGCGCATATCGCGGAAATCACGCGCCGGGTGACCGCC TTGGGCGGGAAGGGGCCATC
Downstream 100 bases:
>100_bases CCTTGTCCCAACGACACGAGGCCTTCGCGCGCCTTCACCAGAGTGGGTGTTTCGTGATGCCCAACCCCTGGGATCGCGGC TCGGCCCGGATGATGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MTGLKRPLRPPDWSDTHAAPLRAELTTARAAYEVALGQLPPWTRRAMTIRNAIVGRLGLRTPDMQQGMADLPIVAESDES YELGLIDRHLTFTLQTIVEDDIARLTTRIWFNHWTGRLYLALVLIPHKIIVKLALRRLA
Sequences:
>Translated_139_residues MTGLKRPLRPPDWSDTHAAPLRAELTTARAAYEVALGQLPPWTRRAMTIRNAIVGRLGLRTPDMQQGMADLPIVAESDES YELGLIDRHLTFTLQTIVEDDIARLTTRIWFNHWTGRLYLALVLIPHKIIVKLALRRLA >Mature_138_residues TGLKRPLRPPDWSDTHAAPLRAELTTARAAYEVALGQLPPWTRRAMTIRNAIVGRLGLRTPDMQQGMADLPIVAESDESY ELGLIDRHLTFTLQTIVEDDIARLTTRIWFNHWTGRLYLALVLIPHKIIVKLALRRLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15802; Mature: 15671
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLKRPLRPPDWSDTHAAPLRAELTTARAAYEVALGQLPPWTRRAMTIRNAIVGRLGLR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC TPDMQQGMADLPIVAESDESYELGLIDRHLTFTLQTIVEDDIARLTTRIWFNHWTGRLYL CCCHHCCCCCCCEEECCCCCEEECEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ALVLIPHKIIVKLALRRLA HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TGLKRPLRPPDWSDTHAAPLRAELTTARAAYEVALGQLPPWTRRAMTIRNAIVGRLGLR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC TPDMQQGMADLPIVAESDESYELGLIDRHLTFTLQTIVEDDIARLTTRIWFNHWTGRLYL CCCHHCCCCCCCEEECCCCCEEECEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ALVLIPHKIIVKLALRRLA HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA