Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is imuB [H]

Identifier: 89054050

GI number: 89054050

Start: 1534062

End: 1535495

Strand: Reverse

Name: imuB [H]

Synonym: Jann_1559

Alternate gene names: 89054050

Gene position: 1535495-1534062 (Counterclockwise)

Preceding gene: 89054051

Following gene: 89054049

Centisome position: 35.56

GC content: 62.62

Gene sequence:

>1434_bases
ATGCCCCTTGTGCTGGTGCGTGAAGGGCATCATGGGCCGGTCGTTCATGCGGCGAACCGTGCCGCGCGGTTGGGAGGGAT
CAATCCCGGCGCACGCCTTGTGGATATGCGCGCCATTTGTCCCGAACTGCATGTGGAATATGCCGATATCATGGGCGACC
GGGCTGCATTGGACCGACTTGTCCTTTGGGCGCGGCGCTGGTGCCCCTGGACGGTGCGCGATGGGGAAGACGGGCTGATC
CTCGACACCACTGGTTCAGATCATCTTCTGGGCGGCGAAGCGGCGATGCTGACGACAATGGAGACGCAATTATCCCTGCT
GGGGATCAGCGCCCGACTGGCCGTTGCGCCAACATGGGGGGCGGCATGGGCCCTGGCGCGCTTTGGCCCGGTCAGGTCCG
TTTGTGCCGCGGATGAGGTGGACATCAAACTAGGGGCCCTGCCCGTCACCGGGTTGCGGTTGGAGAATGACACCGTCGTT
CTGTTACGCCGCCTGGGTCTGAAAACCATCGGCGCGCTCATGGATGTGCCCCGGTTGTCGCTGGCCAGAAGGTTTGTGAA
AGCGGCCCTTGAGGCAAACCCGCTGATGCGTCTTGATCAGGCGTTGGGGAAATTGGCGGAACCTGTTGCCAGCGTGGGCG
CCTCTCCGCGTTTGCGGGTGCAAAGCAGCCTGGCCGAGCCGATTTTTGATCCGACCCCATATCTGCCGGGCTTGTGTGAA
GATCTATGTGAGGCCCTCAAACAGGCTGGGCAAGGCTGTCGCCGCCTGGGTCTGACCGTGTATCACACCGATGGGGATGT
CAGCCATGTGAGCGTCGCAACCTCCGCCACGACGCGCGATCCAAACCACCTGCATGGCCTGTTCCGGGACAAGGTGGAGC
GGATCAACCCCGGGTTTGGCTTTGACCTGATCACGCTTGAGGCGGGCGGCGTGGAAGATATGCAGGACCGCCAGAACCGG
TTGGATGGTGCGGCGGATGATGATCTGCATCTGACACAATTGGTGGACCGGTTAAGCGCCAGGTTTGGGGCGCGCGCCAT
CACACGCCCTGTCTTGCGGGCCAGCCATATCCCCGAACGGGCCGAAAGGCATATGGCTGCGGACGCAATGCTGGCCGAAC
CCGAAACAGCGCCCCTGAAAGAGCGGCCCTTGCGGTTGTTCGATCACCCCGAAGAAGTCCGCGTTCTTTATGCCGTGCCG
GAAGGCCCGCCCGCGCAATTTGTCTGGCGCAGACAAACCCACCGCGTGATGCGCTATTCCGGCCCTGAACGGATCGCCCC
TGAATGGTGGAAAGATCGCCCCGGCACCCGGTTGCGCGATTATTTCAAGGTCGAAAATCACGCGGGGCAGCGCATCTGGC
TTTATCGGGAAGGGTTGCACGAGGATGGGCGCGGCGGCGATCCGCGCTGGTTCGTGCATGGGTGTTTCGCGTGA

Upstream 100 bases:

>100_bases
TATGACGGGGCGTCGGATCGTCTCGATCTCTCTGCCGCAGTTCGCGATGGAACGCTGGCACCGGGTGATGGAGCGGCACG
GCAACGCGCCACCGGATGAC

Downstream 100 bases:

>100_bases
TGGAGAGGGAAGAGGTCCATGCCTGAAATGGACAACCAGCGCCCAAGGCGCACCATCGAGGAGGGTGGCTTCAAACCGAA
CCCGAAGGCCGATTATGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MPLVLVREGHHGPVVHAANRAARLGGINPGARLVDMRAICPELHVEYADIMGDRAALDRLVLWARRWCPWTVRDGEDGLI
LDTTGSDHLLGGEAAMLTTMETQLSLLGISARLAVAPTWGAAWALARFGPVRSVCAADEVDIKLGALPVTGLRLENDTVV
LLRRLGLKTIGALMDVPRLSLARRFVKAALEANPLMRLDQALGKLAEPVASVGASPRLRVQSSLAEPIFDPTPYLPGLCE
DLCEALKQAGQGCRRLGLTVYHTDGDVSHVSVATSATTRDPNHLHGLFRDKVERINPGFGFDLITLEAGGVEDMQDRQNR
LDGAADDDLHLTQLVDRLSARFGARAITRPVLRASHIPERAERHMAADAMLAEPETAPLKERPLRLFDHPEEVRVLYAVP
EGPPAQFVWRRQTHRVMRYSGPERIAPEWWKDRPGTRLRDYFKVENHAGQRIWLYREGLHEDGRGGDPRWFVHGCFA

Sequences:

>Translated_477_residues
MPLVLVREGHHGPVVHAANRAARLGGINPGARLVDMRAICPELHVEYADIMGDRAALDRLVLWARRWCPWTVRDGEDGLI
LDTTGSDHLLGGEAAMLTTMETQLSLLGISARLAVAPTWGAAWALARFGPVRSVCAADEVDIKLGALPVTGLRLENDTVV
LLRRLGLKTIGALMDVPRLSLARRFVKAALEANPLMRLDQALGKLAEPVASVGASPRLRVQSSLAEPIFDPTPYLPGLCE
DLCEALKQAGQGCRRLGLTVYHTDGDVSHVSVATSATTRDPNHLHGLFRDKVERINPGFGFDLITLEAGGVEDMQDRQNR
LDGAADDDLHLTQLVDRLSARFGARAITRPVLRASHIPERAERHMAADAMLAEPETAPLKERPLRLFDHPEEVRVLYAVP
EGPPAQFVWRRQTHRVMRYSGPERIAPEWWKDRPGTRLRDYFKVENHAGQRIWLYREGLHEDGRGGDPRWFVHGCFA
>Mature_476_residues
PLVLVREGHHGPVVHAANRAARLGGINPGARLVDMRAICPELHVEYADIMGDRAALDRLVLWARRWCPWTVRDGEDGLIL
DTTGSDHLLGGEAAMLTTMETQLSLLGISARLAVAPTWGAAWALARFGPVRSVCAADEVDIKLGALPVTGLRLENDTVVL
LRRLGLKTIGALMDVPRLSLARRFVKAALEANPLMRLDQALGKLAEPVASVGASPRLRVQSSLAEPIFDPTPYLPGLCED
LCEALKQAGQGCRRLGLTVYHTDGDVSHVSVATSATTRDPNHLHGLFRDKVERINPGFGFDLITLEAGGVEDMQDRQNRL
DGAADDDLHLTQLVDRLSARFGARAITRPVLRASHIPERAERHMAADAMLAEPETAPLKERPLRLFDHPEEVRVLYAVPE
GPPAQFVWRRQTHRVMRYSGPERIAPEWWKDRPGTRLRDYFKVENHAGQRIWLYREGLHEDGRGGDPRWFVHGCFA

Specific function: Along with dnaE2 and imuA is required for the error- prone processing of DNA lesions [H]

COG id: COG0389

COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001126 [H]

Pfam domain/function: PF00817 IMS [H]

EC number: NA

Molecular weight: Translated: 52831; Mature: 52700

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLVLVREGHHGPVVHAANRAARLGGINPGARLVDMRAICPELHVEYADIMGDRAALDRL
CCEEEEECCCCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VLWARRWCPWTVRDGEDGLILDTTGSDHLLGGEAAMLTTMETQLSLLGISARLAVAPTWG
HHHHHHCCCCEEECCCCCEEEECCCCCCEECCCHHEEEHHHHHHHHHEEEEEEEECCCCH
AAWALARFGPVRSVCAADEVDIKLGALPVTGLRLENDTVVLLRRLGLKTIGALMDVPRLS
HHHHHHHHCCHHHHHCCCCCCEEECCEEEECEEECCCHHHHHHHHCHHHHHHHHCCHHHH
LARRFVKAALEANPLMRLDQALGKLAEPVASVGASPRLRVQSSLAEPIFDPTPYLPGLCE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCCCCCHHHH
DLCEALKQAGQGCRRLGLTVYHTDGDVSHVSVATSATTRDPNHLHGLFRDKVERINPGFG
HHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
FDLITLEAGGVEDMQDRQNRLDGAADDDLHLTQLVDRLSARFGARAITRPVLRASHIPER
EEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHH
AERHMAADAMLAEPETAPLKERPLRLFDHPEEVRVLYAVPEGPPAQFVWRRQTHRVMRYS
HHHHHHHHHHHCCCCCCCHHHCCCHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC
GPERIAPEWWKDRPGTRLRDYFKVENHAGQRIWLYREGLHEDGRGGDPRWFVHGCFA
CCCCCCCHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure 
PLVLVREGHHGPVVHAANRAARLGGINPGARLVDMRAICPELHVEYADIMGDRAALDRL
CEEEEECCCCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VLWARRWCPWTVRDGEDGLILDTTGSDHLLGGEAAMLTTMETQLSLLGISARLAVAPTWG
HHHHHHCCCCEEECCCCCEEEECCCCCCEECCCHHEEEHHHHHHHHHEEEEEEEECCCCH
AAWALARFGPVRSVCAADEVDIKLGALPVTGLRLENDTVVLLRRLGLKTIGALMDVPRLS
HHHHHHHHCCHHHHHCCCCCCEEECCEEEECEEECCCHHHHHHHHCHHHHHHHHCCHHHH
LARRFVKAALEANPLMRLDQALGKLAEPVASVGASPRLRVQSSLAEPIFDPTPYLPGLCE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCCCCCHHHH
DLCEALKQAGQGCRRLGLTVYHTDGDVSHVSVATSATTRDPNHLHGLFRDKVERINPGFG
HHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
FDLITLEAGGVEDMQDRQNRLDGAADDDLHLTQLVDRLSARFGARAITRPVLRASHIPER
EEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHH
AERHMAADAMLAEPETAPLKERPLRLFDHPEEVRVLYAVPEGPPAQFVWRRQTHRVMRYS
HHHHHHHHHHHCCCCCCCHHHCCCHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC
GPERIAPEWWKDRPGTRLRDYFKVENHAGQRIWLYREGLHEDGRGGDPRWFVHGCFA
CCCCCCCHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA