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The map label for this gene is 89054041

Identifier: 89054041

GI number: 89054041

Start: 1521090

End: 1521734

Strand: Direct

Name: 89054041

Synonym: Jann_1550

Alternate gene names: NA

Gene position: 1521090-1521734 (Clockwise)

Preceding gene: 89054036

Following gene: 89054042

Centisome position: 35.23

GC content: 59.84

Gene sequence:

>645_bases
ATGACGAATGCGGCCGAACGCTTTGCGCAGCTACCCTCTGAAAAAAGGGACAGACTTCTAGACCCCGCGGAAGCAGAATT
CATTGATCGCGGGTATGATGCGGCGTCTTTGAATCGTGTCTTGTCCAACGCTGGGATGAGCAAGGGTCAGGCCTACCACT
ACATCACCGGCAAGTCCGACCTGTACCTTTGGGTTTGCAAACGTCGCTTTCTGCCGCTGCTGGAGCAGGCTGAATCCTGC
CTTCGCTTCGATCAGGGGGCTGAATTCTGGTCGGTGGTCGAGGGATGCAGCGCGGCCTTGGTTGAAAAGTTGGAGGCGGA
CCCTGCGCTGTCGTCATTGGCGCGCGGAGTGTACGATAGTGCGGCGGCGTCCACAGTCCTTGTCCCCTTGGCTGAAAGGG
TAGATGCGCTGCTGAACCGGGCGATAGATGCGGGGCGCAGCGCCGACGTTATACGCGACGACCTGCCTCGGGACATGGTG
CGCGACATGCTTAAGGGGGCTGCGATTAGTCTCGACCGATGGTTTGCACGCTTTGGCCCGACGTTGGACCCGACCGAGGC
TGAGCACGCGACGCACGGCGCGCTTGAAATGTTGAGGAACATGGTTGCCCCGGTTGAAGGAGGAAGGGACGCGACCGATG
CTTGA

Upstream 100 bases:

>100_bases
TGTGTATTCGGGGATCATATTCTACCTGTCATCATCTCACTTGCGTGTTTTAGACCGGTGGTCTAAATATGTCTACGATG
ATTTGAACAATGGTAAAGCC

Downstream 100 bases:

>100_bases
GGAACTTTCAGAAAATGTTTGGATCGCGGAAGGAACATGCGTCAGTTTTCACGGTTTTCACGGTTTTCACGGTTTTCACG
GTTTTCACGGTTTTCACGGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MTNAAERFAQLPSEKRDRLLDPAEAEFIDRGYDAASLNRVLSNAGMSKGQAYHYITGKSDLYLWVCKRRFLPLLEQAESC
LRFDQGAEFWSVVEGCSAALVEKLEADPALSSLARGVYDSAAASTVLVPLAERVDALLNRAIDAGRSADVIRDDLPRDMV
RDMLKGAAISLDRWFARFGPTLDPTEAEHATHGALEMLRNMVAPVEGGRDATDA

Sequences:

>Translated_214_residues
MTNAAERFAQLPSEKRDRLLDPAEAEFIDRGYDAASLNRVLSNAGMSKGQAYHYITGKSDLYLWVCKRRFLPLLEQAESC
LRFDQGAEFWSVVEGCSAALVEKLEADPALSSLARGVYDSAAASTVLVPLAERVDALLNRAIDAGRSADVIRDDLPRDMV
RDMLKGAAISLDRWFARFGPTLDPTEAEHATHGALEMLRNMVAPVEGGRDATDA
>Mature_213_residues
TNAAERFAQLPSEKRDRLLDPAEAEFIDRGYDAASLNRVLSNAGMSKGQAYHYITGKSDLYLWVCKRRFLPLLEQAESCL
RFDQGAEFWSVVEGCSAALVEKLEADPALSSLARGVYDSAAASTVLVPLAERVDALLNRAIDAGRSADVIRDDLPRDMVR
DMLKGAAISLDRWFARFGPTLDPTEAEHATHGALEMLRNMVAPVEGGRDATDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23446; Mature: 23314

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNAAERFAQLPSEKRDRLLDPAEAEFIDRGYDAASLNRVLSNAGMSKGQAYHYITGKSD
CCCHHHHHHHCCHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCC
LYLWVCKRRFLPLLEQAESCLRFDQGAEFWSVVEGCSAALVEKLEADPALSSLARGVYDS
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AAASTVLVPLAERVDALLNRAIDAGRSADVIRDDLPRDMVRDMLKGAAISLDRWFARFGP
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
TLDPTEAEHATHGALEMLRNMVAPVEGGRDATDA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TNAAERFAQLPSEKRDRLLDPAEAEFIDRGYDAASLNRVLSNAGMSKGQAYHYITGKSD
CCHHHHHHHCCHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCC
LYLWVCKRRFLPLLEQAESCLRFDQGAEFWSVVEGCSAALVEKLEADPALSSLARGVYDS
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AAASTVLVPLAERVDALLNRAIDAGRSADVIRDDLPRDMVRDMLKGAAISLDRWFARFGP
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
TLDPTEAEHATHGALEMLRNMVAPVEGGRDATDA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA