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The map label for this gene is alpA [C]

Identifier: 89054033

GI number: 89054033

Start: 1512410

End: 1512640

Strand: Reverse

Name: alpA [C]

Synonym: Jann_1542

Alternate gene names: 89054033

Gene position: 1512640-1512410 (Counterclockwise)

Preceding gene: 89054034

Following gene: 89054022

Centisome position: 35.03

GC content: 59.74

Gene sequence:

>231_bases
ATGTCCCACCCAGACCGCATCGTTCGCCTCACAACCGTCCTCGACCGCACCGGCCTGTCCCGATCCACCCTCTACCGCAA
AATCGCAGAAGGGACCTTTCCCGCGCAGCTCCGGATCAGCGTTCATGGCGCAGGCTGGCGGGAGTCTGAGATTGGCGAAT
GGATCGACAATCCGGCAGGGTGGAGGCCTCAAAACTCAACCGTAGAAACGCTCAAAAAGCGTGAGCACTAA

Upstream 100 bases:

>100_bases
CGCACCGCTACGATGGATCGAGCGCTCTTGCGAGAGGGTCACTGCTTGGTCTGTTTGGGTCACCAGACCTCAGACCCCAC
CAGCAGGAGCCAGACACCCC

Downstream 100 bases:

>100_bases
GGGCAATTGTACGGACAGTCCCGCTTTACAAGCATGGATGCCCGAGATGGGCGTTATGTTAATTCGACACCCAGAGCTCC
GATCAACGCAATCCTATCAC

Product: phage transcriptional regulator, AlpA

Products: NA

Alternate protein names: Prophage CP4-57 Regulatory Protein; Prophage CP4-57 Regulatory

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MSHPDRIVRLTTVLDRTGLSRSTLYRKIAEGTFPAQLRISVHGAGWRESEIGEWIDNPAGWRPQNSTVETLKKREH

Sequences:

>Translated_76_residues
MSHPDRIVRLTTVLDRTGLSRSTLYRKIAEGTFPAQLRISVHGAGWRESEIGEWIDNPAGWRPQNSTVETLKKREH
>Mature_75_residues
SHPDRIVRLTTVLDRTGLSRSTLYRKIAEGTFPAQLRISVHGAGWRESEIGEWIDNPAGWRPQNSTVETLKKREH

Specific function: Positive Regulator Of The Expression Of The Slpa Gene. [C]

COG id: COG3311

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8711; Mature: 8580

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPDRIVRLTTVLDRTGLSRSTLYRKIAEGTFPAQLRISVHGAGWRESEIGEWIDNPAG
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHCCCCC
WRPQNSTVETLKKREH
CCCCCCHHHHHHHCCC
>Mature Secondary Structure 
SHPDRIVRLTTVLDRTGLSRSTLYRKIAEGTFPAQLRISVHGAGWRESEIGEWIDNPAG
CCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHCCCCC
WRPQNSTVETLKKREH
CCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA