Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054022

Identifier: 89054022

GI number: 89054022

Start: 1500936

End: 1501229

Strand: Reverse

Name: 89054022

Synonym: Jann_1531

Alternate gene names: NA

Gene position: 1501229-1500936 (Counterclockwise)

Preceding gene: 89054033

Following gene: 89054018

Centisome position: 34.77

GC content: 54.76

Gene sequence:

>294_bases
TTGTATCTAATGCCAGATTGTTGCGGCGGTAGCACGTTCTGGTCGGAGTTCGAAGAACCCGCAGAACAGAAATCGCTCAG
CTTGACAACCTGCTCCACCAACGTCCGCTTAGTTGATATAAACAAAACATATTACTGTCGGGTCGAAGGTCCGGAGAGGG
CCGCGAGCGACGACGCGATGGCTGGCTCTTCGGGCGATGCTGCGACGCAGAGAATGGCAGCATTGAGCCTTGTTGCTTAC
CTTCTGCGCCGCAGCGAACGTCTGGTTCACCACTTAGGTCGAGCTTGCGAATGA

Upstream 100 bases:

>100_bases
TTTGCGACCCAAATCAATCGAAGTTGGCTCAGACGCTTGCTCCGCAAAGGAACTTAAGAGCTAGCACATCTTGTACCGAG
ATGTCGATATCGACTAGCTA

Downstream 100 bases:

>100_bases
GCCGCTTCACATAATATCACAGACCAATTAGAGCGTTCGATACGTTTCGATGGCCAGCGCGGACAACGCCAAGTCGCCGA
GGGCGTGCCCTCGAAAGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MYLMPDCCGGSTFWSEFEEPAEQKSLSLTTCSTNVRLVDINKTYYCRVEGPERAASDDAMAGSSGDAATQRMAALSLVAY
LLRRSERLVHHLGRACE

Sequences:

>Translated_97_residues
MYLMPDCCGGSTFWSEFEEPAEQKSLSLTTCSTNVRLVDINKTYYCRVEGPERAASDDAMAGSSGDAATQRMAALSLVAY
LLRRSERLVHHLGRACE
>Mature_97_residues
MYLMPDCCGGSTFWSEFEEPAEQKSLSLTTCSTNVRLVDINKTYYCRVEGPERAASDDAMAGSSGDAATQRMAALSLVAY
LLRRSERLVHHLGRACE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10698; Mature: 10698

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLMPDCCGGSTFWSEFEEPAEQKSLSLTTCSTNVRLVDINKTYYCRVEGPERAASDDAM
CCCCCCCCCCCHHHHHHHCHHHHHCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCC
AGSSGDAATQRMAALSLVAYLLRRSERLVHHLGRACE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYLMPDCCGGSTFWSEFEEPAEQKSLSLTTCSTNVRLVDINKTYYCRVEGPERAASDDAM
CCCCCCCCCCCHHHHHHHCHHHHHCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCC
AGSSGDAATQRMAALSLVAYLLRRSERLVHHLGRACE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA