| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054022
Identifier: 89054022
GI number: 89054022
Start: 1500936
End: 1501229
Strand: Reverse
Name: 89054022
Synonym: Jann_1531
Alternate gene names: NA
Gene position: 1501229-1500936 (Counterclockwise)
Preceding gene: 89054033
Following gene: 89054018
Centisome position: 34.77
GC content: 54.76
Gene sequence:
>294_bases TTGTATCTAATGCCAGATTGTTGCGGCGGTAGCACGTTCTGGTCGGAGTTCGAAGAACCCGCAGAACAGAAATCGCTCAG CTTGACAACCTGCTCCACCAACGTCCGCTTAGTTGATATAAACAAAACATATTACTGTCGGGTCGAAGGTCCGGAGAGGG CCGCGAGCGACGACGCGATGGCTGGCTCTTCGGGCGATGCTGCGACGCAGAGAATGGCAGCATTGAGCCTTGTTGCTTAC CTTCTGCGCCGCAGCGAACGTCTGGTTCACCACTTAGGTCGAGCTTGCGAATGA
Upstream 100 bases:
>100_bases TTTGCGACCCAAATCAATCGAAGTTGGCTCAGACGCTTGCTCCGCAAAGGAACTTAAGAGCTAGCACATCTTGTACCGAG ATGTCGATATCGACTAGCTA
Downstream 100 bases:
>100_bases GCCGCTTCACATAATATCACAGACCAATTAGAGCGTTCGATACGTTTCGATGGCCAGCGCGGACAACGCCAAGTCGCCGA GGGCGTGCCCTCGAAAGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MYLMPDCCGGSTFWSEFEEPAEQKSLSLTTCSTNVRLVDINKTYYCRVEGPERAASDDAMAGSSGDAATQRMAALSLVAY LLRRSERLVHHLGRACE
Sequences:
>Translated_97_residues MYLMPDCCGGSTFWSEFEEPAEQKSLSLTTCSTNVRLVDINKTYYCRVEGPERAASDDAMAGSSGDAATQRMAALSLVAY LLRRSERLVHHLGRACE >Mature_97_residues MYLMPDCCGGSTFWSEFEEPAEQKSLSLTTCSTNVRLVDINKTYYCRVEGPERAASDDAMAGSSGDAATQRMAALSLVAY LLRRSERLVHHLGRACE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10698; Mature: 10698
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLMPDCCGGSTFWSEFEEPAEQKSLSLTTCSTNVRLVDINKTYYCRVEGPERAASDDAM CCCCCCCCCCCHHHHHHHCHHHHHCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCC AGSSGDAATQRMAALSLVAYLLRRSERLVHHLGRACE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYLMPDCCGGSTFWSEFEEPAEQKSLSLTTCSTNVRLVDINKTYYCRVEGPERAASDDAM CCCCCCCCCCCHHHHHHHCHHHHHCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCC AGSSGDAATQRMAALSLVAYLLRRSERLVHHLGRACE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA