| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054028
Identifier: 89054028
GI number: 89054028
Start: 1507832
End: 1508062
Strand: Direct
Name: 89054028
Synonym: Jann_1537
Alternate gene names: NA
Gene position: 1507832-1508062 (Clockwise)
Preceding gene: 89054027
Following gene: 89054029
Centisome position: 34.92
GC content: 57.58
Gene sequence:
>231_bases GTGGGGATAGGGCGCATGCACCTCAAACGGATCGAACCTGAGGCGAACTTGAACCGCTTCTACCGCATGGAGATCGTGCC AGGTCTCTTCGGAGACTGGGGCCTGGTCCGCGAATGGGGGCGGAATGGGCGATCCGGCCAGATGCGCACGGATTGGTTTG GCACGGAGATTGAGGCCAAAGATGCGAGGTTCAAATTACATATGAAGAAGGCGAAGCGGGGATATGCTTGA
Upstream 100 bases:
>100_bases TCCACATGCTGCAAAAGTGGCTTGGCCACGCGCAGCTTTCCACGACGACGATCTACGCCGATGCCATCGGCAAGGAAGAG CAGGACCTCGCGTCTAGGAT
Downstream 100 bases:
>100_bases AGGCGATAGCTATTCGCCAACAACAATTCTCGCTAAGTTGAGTGCATGAACATCTCGCAAAAGATCATGGCGATCTACGA CATGGCTTATTCAGGCCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MGIGRMHLKRIEPEANLNRFYRMEIVPGLFGDWGLVREWGRNGRSGQMRTDWFGTEIEAKDARFKLHMKKAKRGYA
Sequences:
>Translated_76_residues MGIGRMHLKRIEPEANLNRFYRMEIVPGLFGDWGLVREWGRNGRSGQMRTDWFGTEIEAKDARFKLHMKKAKRGYA >Mature_75_residues GIGRMHLKRIEPEANLNRFYRMEIVPGLFGDWGLVREWGRNGRSGQMRTDWFGTEIEAKDARFKLHMKKAKRGYA
Specific function: Unknown
COG id: COG3831
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008893 [H]
Pfam domain/function: PF05406 WGR [H]
EC number: NA
Molecular weight: Translated: 8970; Mature: 8838
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIGRMHLKRIEPEANLNRFYRMEIVPGLFGDWGLVREWGRNGRSGQMRTDWFGTEIEAK CCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCEECCCCCCEECCC DARFKLHMKKAKRGYA CCEEEEEEHHHCCCCC >Mature Secondary Structure GIGRMHLKRIEPEANLNRFYRMEIVPGLFGDWGLVREWGRNGRSGQMRTDWFGTEIEAK CCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCEECCCCCCEECCC DARFKLHMKKAKRGYA CCEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]