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The map label for this gene is scpA [H]

Identifier: 89054001

GI number: 89054001

Start: 1480576

End: 1481388

Strand: Direct

Name: scpA [H]

Synonym: Jann_1510

Alternate gene names: 89054001

Gene position: 1480576-1481388 (Clockwise)

Preceding gene: 89054000

Following gene: 89054002

Centisome position: 34.29

GC content: 64.7

Gene sequence:

>813_bases
ATGACAGGGACTGAATCCGGGGCCAGCGGGGGTCAGCCAGCCAACAGCGATGATTGGGACGCGGTCACCGCGCGCCGGGA
GGCCGAGGCGCTGATCATCGACGTCGACGGGTTCGAAGGGCCACTGGACCTGTTGCTGACGCTGTCGCGGACGCAGAAGG
TGGATTTGCGCCGGATCTCGATCCTGGCCCTGACCGAACAATACCTTGTTTTCATTGAGAAAGCGCGCCAGTTACGGATC
GAGTTGGCCGCCGATTATCTGGTGATGGCCGCCTGGCTCGCCTTCCTGAAATCCAAGCTGCTGTTGCCGCCGGAACCGGG
GGAAGAGGGGCCGTCGGGCGAAGATCTCGCCGCACATCTGGCGTTTCAGCTGGAGCGTCTGGCGGCGATGCGGGACTGCG
CCGCGCGCCTGATGGCACAGGATCGTTTGGGCCGGGACCGGTTCGTGCGCGGGCAAACCCAGGCCATGACGACGAACCGC
AAGGTGATCTACACGGCGGGCCTTCTGGACCTGATGCAGGCCTATGCCCGCATCCGCACCAAGGATGAATTCCGCCCCTT
CGTGATGGACCGCGAGGCGGTGTTAACCATGGAAGAGGCGCTGGACCGCCTGCGCGGCATGGTCGGCTACATGGGCGACT
GGGCGGATCTGATGTCGTATTTGCCCGATGGCTGGACCACGGACCCGGCCAAACGACGGTCTGCGGCGGCTGCAAACTTC
GCGGCAGCCCTGGAGCTTGCGAAAGCGGGGCGTGTCGAGATCCGCCAGGCGGACACGTTCTCCCCCATCCAACTGCGCCG
GAAAGAGCCATGA

Upstream 100 bases:

>100_bases
GCTGACATCGCCGATGCGCGCCGCCCCAGCCAACAACACCTTGACATCAACGCCGTTGAGCAAGAACTTTCCGACCTTCT
GGGCGGAAAGGTTTACGTCA

Downstream 100 bases:

>100_bases
CGGACACGCCGAAGCAAACCGAGGAAAGCCTGTTTCGCGCCCCCCCACTGGCGGAACAGGAACGCATGGTGGAGGCGCTT
TTGTTCGCCTCGGCTGATCC

Product: condensin subunit ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MTGTESGASGGQPANSDDWDAVTARREAEALIIDVDGFEGPLDLLLTLSRTQKVDLRRISILALTEQYLVFIEKARQLRI
ELAADYLVMAAWLAFLKSKLLLPPEPGEEGPSGEDLAAHLAFQLERLAAMRDCAARLMAQDRLGRDRFVRGQTQAMTTNR
KVIYTAGLLDLMQAYARIRTKDEFRPFVMDREAVLTMEEALDRLRGMVGYMGDWADLMSYLPDGWTTDPAKRRSAAAANF
AAALELAKAGRVEIRQADTFSPIQLRRKEP

Sequences:

>Translated_270_residues
MTGTESGASGGQPANSDDWDAVTARREAEALIIDVDGFEGPLDLLLTLSRTQKVDLRRISILALTEQYLVFIEKARQLRI
ELAADYLVMAAWLAFLKSKLLLPPEPGEEGPSGEDLAAHLAFQLERLAAMRDCAARLMAQDRLGRDRFVRGQTQAMTTNR
KVIYTAGLLDLMQAYARIRTKDEFRPFVMDREAVLTMEEALDRLRGMVGYMGDWADLMSYLPDGWTTDPAKRRSAAAANF
AAALELAKAGRVEIRQADTFSPIQLRRKEP
>Mature_269_residues
TGTESGASGGQPANSDDWDAVTARREAEALIIDVDGFEGPLDLLLTLSRTQKVDLRRISILALTEQYLVFIEKARQLRIE
LAADYLVMAAWLAFLKSKLLLPPEPGEEGPSGEDLAAHLAFQLERLAAMRDCAARLMAQDRLGRDRFVRGQTQAMTTNRK
VIYTAGLLDLMQAYARIRTKDEFRPFVMDREAVLTMEEALDRLRGMVGYMGDWADLMSYLPDGWTTDPAKRRSAAAANFA
AALELAKAGRVEIRQADTFSPIQLRRKEP

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 30123; Mature: 29992

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTESGASGGQPANSDDWDAVTARREAEALIIDVDGFEGPLDLLLTLSRTQKVDLRRIS
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHH
ILALTEQYLVFIEKARQLRIELAADYLVMAAWLAFLKSKLLLPPEPGEEGPSGEDLAAHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
AFQLERLAAMRDCAARLMAQDRLGRDRFVRGQTQAMTTNRKVIYTAGLLDLMQAYARIRT
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHEECCCEEEEEHHHHHHHHHHHHHHC
KDEFRPFVMDREAVLTMEEALDRLRGMVGYMGDWADLMSYLPDGWTTDPAKRRSAAAANF
HHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHH
AAALELAKAGRVEIRQADTFSPIQLRRKEP
HHHHHHHHCCCEEEECCCCCCCHHHCCCCC
>Mature Secondary Structure 
TGTESGASGGQPANSDDWDAVTARREAEALIIDVDGFEGPLDLLLTLSRTQKVDLRRIS
CCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHH
ILALTEQYLVFIEKARQLRIELAADYLVMAAWLAFLKSKLLLPPEPGEEGPSGEDLAAHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
AFQLERLAAMRDCAARLMAQDRLGRDRFVRGQTQAMTTNRKVIYTAGLLDLMQAYARIRT
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHEECCCEEEEEHHHHHHHHHHHHHHC
KDEFRPFVMDREAVLTMEEALDRLRGMVGYMGDWADLMSYLPDGWTTDPAKRRSAAAANF
HHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHH
AAALELAKAGRVEIRQADTFSPIQLRRKEP
HHHHHHHHCCCEEEECCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]