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The map label for this gene is 89053988

Identifier: 89053988

GI number: 89053988

Start: 1467824

End: 1468768

Strand: Direct

Name: 89053988

Synonym: Jann_1497

Alternate gene names: NA

Gene position: 1467824-1468768 (Clockwise)

Preceding gene: 89053982

Following gene: 89053989

Centisome position: 33.99

GC content: 63.49

Gene sequence:

>945_bases
ATGACCCTTTTTCGCGCAACTGCGACCAGTGCCCTCGCGTTAACCCTGACCGCCGGGGCCGCGATGGCCGACGCCCATGC
AGACTGTGGCACCGTGACCTTCTCGGACGTCGGTTGGACGGATATCACCGCCACGACAGCCGCGACCTCCGTCGTGCTGG
AGGCTTTGGGCTATGAGACCGAGATCCTCGTTCTGTCCGTTCCGGTGACCTACACGTCGCTTGCGGAAGGGGATGTGGAT
ATCTTCCTGGGCAACTGGATGCCGACGATGGAAGCCGACATCGCGCCCTATCGTGAGGCGGGCACCGTCGATACCGTCCG
CGCCAACCTTGAGGGCGCGAAGTACACGCTGGCCACGAACGCCGCCGGGGCCGCCCTCGGGATCACTGATTTCGCCTCCA
TCGTGGCGGCCATGGACGAGCTGGATGGCGAGATCTACGGCATTGAGCCCGGCAACGACGGCAACCGCCTGATCATGGAT
ATGATCGAGGCCGACGCCTTTGGTCTGAGCGAGTTTGAAGTCGTCGAATCCTCCGAGCAGGGCATGCTGGCGCAGGTCGC
CCGCGCCTCTGACCGGGACGAGCCCGTCGTTTTCCTCGGCTGGGAACCGCATCCGATGAATGCCAATTTCGATCTGACCT
ATCTGGAAGGCGGCGATGATTGGTTCGGCCCCAATCTGGGTGGCGCGACGGTCTTCACCAACACCTCCGCTGGCTACGCG
GACGCCTGCCCGAACGTCGGCGCGCTTCTGAACAATCTGGAATTCAGCCTCGCCATGGAGAACGAAATCATGGGCGCGAT
CCTGGACGAGGGCGAAGATCCTGCCGATGCCGCAACGGCCTGGATGGCCGCCAATCCGGATGCTGTGATGGCCTGGCTTG
ACGGTGTAACAACCTTCGACGGCGGCGACGCATCCGCGGCCGTGTCCGAGGCACTGGGCCTCTAA

Upstream 100 bases:

>100_bases
GGGGCATCGCGACACCTTTCATGTTGCCATGCACCAGAAATAGATTTTTAATTGACTGGTCAATCAACAAAAACGACCAG
ACATCAACGGGAGACCAAAA

Downstream 100 bases:

>100_bases
CCCCAAGTGTTAACGATCTTAAGAAGGCTCCGCTTCGGCGGGGCCTTTTTCCTTGGGGGCATGGATTCCCCACCCGACGC
GAATGGAGGATTTTGGTACC

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: Fragment [H]

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTLFRATATSALALTLTAGAAMADAHADCGTVTFSDVGWTDITATTAATSVVLEALGYETEILVLSVPVTYTSLAEGDVD
IFLGNWMPTMEADIAPYREAGTVDTVRANLEGAKYTLATNAAGAALGITDFASIVAAMDELDGEIYGIEPGNDGNRLIMD
MIEADAFGLSEFEVVESSEQGMLAQVARASDRDEPVVFLGWEPHPMNANFDLTYLEGGDDWFGPNLGGATVFTNTSAGYA
DACPNVGALLNNLEFSLAMENEIMGAILDEGEDPADAATAWMAANPDAVMAWLDGVTTFDGGDASAAVSEALGL

Sequences:

>Translated_314_residues
MTLFRATATSALALTLTAGAAMADAHADCGTVTFSDVGWTDITATTAATSVVLEALGYETEILVLSVPVTYTSLAEGDVD
IFLGNWMPTMEADIAPYREAGTVDTVRANLEGAKYTLATNAAGAALGITDFASIVAAMDELDGEIYGIEPGNDGNRLIMD
MIEADAFGLSEFEVVESSEQGMLAQVARASDRDEPVVFLGWEPHPMNANFDLTYLEGGDDWFGPNLGGATVFTNTSAGYA
DACPNVGALLNNLEFSLAMENEIMGAILDEGEDPADAATAWMAANPDAVMAWLDGVTTFDGGDASAAVSEALGL
>Mature_313_residues
TLFRATATSALALTLTAGAAMADAHADCGTVTFSDVGWTDITATTAATSVVLEALGYETEILVLSVPVTYTSLAEGDVDI
FLGNWMPTMEADIAPYREAGTVDTVRANLEGAKYTLATNAAGAALGITDFASIVAAMDELDGEIYGIEPGNDGNRLIMDM
IEADAFGLSEFEVVESSEQGMLAQVARASDRDEPVVFLGWEPHPMNANFDLTYLEGGDDWFGPNLGGATVFTNTSAGYAD
ACPNVGALLNNLEFSLAMENEIMGAILDEGEDPADAATAWMAANPDAVMAWLDGVTTFDGGDASAAVSEALGL

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 32673; Mature: 32542

Theoretical pI: Translated: 3.35; Mature: 3.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLFRATATSALALTLTAGAAMADAHADCGTVTFSDVGWTDITATTAATSVVLEALGYET
CEEEECCCCCEEEEEEECCCHHHCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHCCCE
EILVLSVPVTYTSLAEGDVDIFLGNWMPTMEADIAPYREAGTVDTVRANLEGAKYTLATN
EEEEEEECCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEC
AAGAALGITDFASIVAAMDELDGEIYGIEPGNDGNRLIMDMIEADAFGLSEFEVVESSEQ
CCCCEECHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEHHHHHCCCCCCCHHEEECCCCC
GMLAQVARASDRDEPVVFLGWEPHPMNANFDLTYLEGGDDWFGPNLGGATVFTNTSAGYA
CHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCC
DACPNVGALLNNLEFSLAMENEIMGAILDEGEDPADAATAWMAANPDAVMAWLDGVTTFD
CCCCCHHHHHHCCEEEEEECCHHHHHHHCCCCCCHHHHHEEECCCCHHHHHHHCCCEEEC
GGDASAAVSEALGL
CCCHHHHHHHHHCC
>Mature Secondary Structure 
TLFRATATSALALTLTAGAAMADAHADCGTVTFSDVGWTDITATTAATSVVLEALGYET
EEEECCCCCEEEEEEECCCHHHCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHCCCE
EILVLSVPVTYTSLAEGDVDIFLGNWMPTMEADIAPYREAGTVDTVRANLEGAKYTLATN
EEEEEEECCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEC
AAGAALGITDFASIVAAMDELDGEIYGIEPGNDGNRLIMDMIEADAFGLSEFEVVESSEQ
CCCCEECHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEHHHHHCCCCCCCHHEEECCCCC
GMLAQVARASDRDEPVVFLGWEPHPMNANFDLTYLEGGDDWFGPNLGGATVFTNTSAGYA
CHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCC
DACPNVGALLNNLEFSLAMENEIMGAILDEGEDPADAATAWMAANPDAVMAWLDGVTTFD
CCCCCHHHHHHCCEEEEEECCHHHHHHHCCCCCCHHHHHEEECCCCHHHHHHHCCCEEEC
GGDASAAVSEALGL
CCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10708384 [H]