Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053982

Identifier: 89053982

GI number: 89053982

Start: 1461044

End: 1462261

Strand: Direct

Name: 89053982

Synonym: Jann_1491

Alternate gene names: NA

Gene position: 1461044-1462261 (Clockwise)

Preceding gene: 89053981

Following gene: 89053988

Centisome position: 33.84

GC content: 61.0

Gene sequence:

>1218_bases
GTGAGTCACAGCGCGCGCGCCAAGTTGGCACTAGCGCATCTTGGCGAAGTCGATCCTGCGCTGGCCGTTCTCGCGCTTTG
GTGTCGACATCGTGATGGCGATGGAGCAACACGAACACAAGGAAATACAATCCTTTACGGGCCGTCCTTTACGTCGTTTG
GATTGGCCGAGCAGGTCGGTTTGCTCGCCCATCACGTCTTGCACGTGGCCCTCCAGCATTCAGATCGTCAAGCTGCCTTG
GCGGAACGGCTTGGCGACCAATTCGATCAGACCCTTTTCGGGTTAGCGGCCGATGGATTGATAAACGAAACGCTGCTGCT
GGCTGGCCACGCGTTGCCACGACCTGCCGTTGTCGTGACAGATCTGTTGGAAGCGGTCGGAAACCCGGCACCATCAAGCA
CGCAAGCCTTGTCCGAATGGGATGTGGATCGCCTGGCGATGGCGTTGCATTCCGATTCGCGAAGTACCGAAAAGGCTAGA
AAATTTGGCAGATCACGCGATTTCTCAGCCGATGTCGAAGATGGAAAGTCAGGCGAAGAAGAGGACACACCAAGTGCCGC
AGAGTGGCGCAATCAGATGCTTCGAGCATTGGAAGCGGGTCGCAAAGCGGGCACAGGAATTGGCCGTTTCGGAGCGCTTC
TGGCCGACATTGCGCCACCAGCCATCCCATGGGAGGTCCAGCTAAGGGGGCTATTGACCCTTGCGTTGAGTGACGTGCCC
AAGATTTCTTACCGGCGACCGGCATCGCGCTGGATCGCGGCTGTGGCTGAGGCGCGGATCGCGGGCACCTTGGAGCCGGC
GTTTCAACCGGGCCGTGCGCGCAGCGGATCGCGCCCGCGTGTGGTGGTTGGATTGGACACCTCCAGCTCCATCAACGCAA
TGGCACTATCGCTTTTTTGTGCGGAGGCAGAAGGGGTTAGCCGTCGGTCGGGGGCCGAGGTGCATCTGCTGGCCTTCGAC
GAAAACGTTCACACCGCGCTTAGGATGGACACCGCTGCATGGCGATCACTTAGGGATAGGCCCCTTCGCACCGGCGGCGG
CACGGACTACGCGCCGGTGATGGAGGCCGCCGCGCGTTTGCGCCCTTCAATCCTGGTGATGTTGACTGATCTCGACGCGC
CGATCGGGCCGCCGCCGCCGTTTCCTGTCCTTTGGGTCGTGCCGGGACGTGCCGGTGTCGACGCGCCTTTCGGTCGGGTG
CTTCGGATCGACGGCTAA

Upstream 100 bases:

>100_bases
TTCTGATTGCCCGGGCGATGGATCGGGGCTGGCAGGAGGTGTTCGCCGCGTCCGACGCCTACGCGGACTATGCGCGGGAG
CGGGCGGCCGCAGGATTGCC

Downstream 100 bases:

>100_bases
GCCTATTCAGCCGCAGCCTTTACGGCATGGCTTTCCCGTTGTGTCGACTGCCAATCCGGTGCGATCCAAGGCGTCAGATT
CTCGGCGGGCACACGGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSHSARAKLALAHLGEVDPALAVLALWCRHRDGDGATRTQGNTILYGPSFTSFGLAEQVGLLAHHVLHVALQHSDRQAAL
AERLGDQFDQTLFGLAADGLINETLLLAGHALPRPAVVVTDLLEAVGNPAPSSTQALSEWDVDRLAMALHSDSRSTEKAR
KFGRSRDFSADVEDGKSGEEEDTPSAAEWRNQMLRALEAGRKAGTGIGRFGALLADIAPPAIPWEVQLRGLLTLALSDVP
KISYRRPASRWIAAVAEARIAGTLEPAFQPGRARSGSRPRVVVGLDTSSSINAMALSLFCAEAEGVSRRSGAEVHLLAFD
ENVHTALRMDTAAWRSLRDRPLRTGGGTDYAPVMEAAARLRPSILVMLTDLDAPIGPPPPFPVLWVVPGRAGVDAPFGRV
LRIDG

Sequences:

>Translated_405_residues
MSHSARAKLALAHLGEVDPALAVLALWCRHRDGDGATRTQGNTILYGPSFTSFGLAEQVGLLAHHVLHVALQHSDRQAAL
AERLGDQFDQTLFGLAADGLINETLLLAGHALPRPAVVVTDLLEAVGNPAPSSTQALSEWDVDRLAMALHSDSRSTEKAR
KFGRSRDFSADVEDGKSGEEEDTPSAAEWRNQMLRALEAGRKAGTGIGRFGALLADIAPPAIPWEVQLRGLLTLALSDVP
KISYRRPASRWIAAVAEARIAGTLEPAFQPGRARSGSRPRVVVGLDTSSSINAMALSLFCAEAEGVSRRSGAEVHLLAFD
ENVHTALRMDTAAWRSLRDRPLRTGGGTDYAPVMEAAARLRPSILVMLTDLDAPIGPPPPFPVLWVVPGRAGVDAPFGRV
LRIDG
>Mature_404_residues
SHSARAKLALAHLGEVDPALAVLALWCRHRDGDGATRTQGNTILYGPSFTSFGLAEQVGLLAHHVLHVALQHSDRQAALA
ERLGDQFDQTLFGLAADGLINETLLLAGHALPRPAVVVTDLLEAVGNPAPSSTQALSEWDVDRLAMALHSDSRSTEKARK
FGRSRDFSADVEDGKSGEEEDTPSAAEWRNQMLRALEAGRKAGTGIGRFGALLADIAPPAIPWEVQLRGLLTLALSDVPK
ISYRRPASRWIAAVAEARIAGTLEPAFQPGRARSGSRPRVVVGLDTSSSINAMALSLFCAEAEGVSRRSGAEVHLLAFDE
NVHTALRMDTAAWRSLRDRPLRTGGGTDYAPVMEAAARLRPSILVMLTDLDAPIGPPPPFPVLWVVPGRAGVDAPFGRVL
RIDG

Specific function: Unknown

COG id: COG3864

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018698 [H]

Pfam domain/function: PF09967 DUF2201 [H]

EC number: NA

Molecular weight: Translated: 43267; Mature: 43135

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSARAKLALAHLGEVDPALAVLALWCRHRDGDGATRTQGNTILYGPSFTSFGLAEQVG
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHH
LLAHHVLHVALQHSDRQAALAERLGDQFDQTLFGLAADGLINETLLLAGHALPRPAVVVT
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
DLLEAVGNPAPSSTQALSEWDVDRLAMALHSDSRSTEKARKFGRSRDFSADVEDGKSGEE
HHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
EDTPSAAEWRNQMLRALEAGRKAGTGIGRFGALLADIAPPAIPWEVQLRGLLTLALSDVP
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
KISYRRPASRWIAAVAEARIAGTLEPAFQPGRARSGSRPRVVVGLDTSSSINAMALSLFC
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
AEAEGVSRRSGAEVHLLAFDENVHTALRMDTAAWRSLRDRPLRTGGGTDYAPVMEAAARL
HHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
RPSILVMLTDLDAPIGPPPPFPVLWVVPGRAGVDAPFGRVLRIDG
CCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
SHSARAKLALAHLGEVDPALAVLALWCRHRDGDGATRTQGNTILYGPSFTSFGLAEQVG
CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHH
LLAHHVLHVALQHSDRQAALAERLGDQFDQTLFGLAADGLINETLLLAGHALPRPAVVVT
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
DLLEAVGNPAPSSTQALSEWDVDRLAMALHSDSRSTEKARKFGRSRDFSADVEDGKSGEE
HHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
EDTPSAAEWRNQMLRALEAGRKAGTGIGRFGALLADIAPPAIPWEVQLRGLLTLALSDVP
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
KISYRRPASRWIAAVAEARIAGTLEPAFQPGRARSGSRPRVVVGLDTSSSINAMALSLFC
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
AEAEGVSRRSGAEVHLLAFDENVHTALRMDTAAWRSLRDRPLRTGGGTDYAPVMEAAARL
HHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
RPSILVMLTDLDAPIGPPPPFPVLWVVPGRAGVDAPFGRVLRIDG
CCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168477; 10360571 [H]