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The map label for this gene is glcD [C]

Identifier: 89053966

GI number: 89053966

Start: 1444632

End: 1446038

Strand: Direct

Name: glcD [C]

Synonym: Jann_1475

Alternate gene names: 89053966

Gene position: 1444632-1446038 (Clockwise)

Preceding gene: 89053965

Following gene: 89053967

Centisome position: 33.46

GC content: 58.28

Gene sequence:

>1407_bases
ATGAACATCCAGGCAGCTATAAAGACCCTTCAGGACAAGGGGATAGAGGTCGACCTTAATCCTGCTTCCGTCAAATCGAA
ATCCCGCGACTTCTTTTGGTATTCACCCGTCCTCAAGGATCGTCTGGATCATGTCGTGGCCGACTTCGTGGCCACGCCGC
ATAGTGAGGCGCAGGTGATCGAAATTCTGCGTGTCTGCTATGGCCACGACGTCCCTGTCACCACGCGCGGCACGGGCACT
GGCAACTACGGCCAAGCCATGCCTTTGGCGGGTGGTTGTGTATTGCATCTGCATAAGATGAACGCCGTTAAGGATATTGC
GCCAGGGCGCGTTGTGGTGGAGCCGGGGTGTCTTTTGAAAGACCTGGATGCCGCGTGTATCGCGGATTCCGGCCAGGAAA
TCCGCATGTTTTCAAGTACATGGGCGACTGCCACGATTGGCGGTTTCATCGCTGGCGGCTCGGGCGGAGTGGGTTCTGTG
CGGTGGGGGGCGTTGCGCGATCCCGGTAACATCATCCGCTTGCGCGTCGTCACGATGGAGCAGGAACCCCGCGTGATGGA
CATCACCGGAGATGATCTTCACCGCGTCAGCCACGCCTATGGCACCAACGGCATCATTACGGAGATCGAGATCCCGCTGG
CCCCAGCCTATGATTGGGTCGGCGTTTTCGTCGCCTTTGATAGCTTCGATGAGGCATTGCAATATTCCTATGATTTGGCC
TCTTGCGACGGCCTTTTGATCAAGCTCGCCACGGTGTTTGAGGCCCCCATCGCCAAAGATTATTTCCAGCGTGTCGCCCC
CCATGTTGAGGCCGGTGAGGCGCTCGTTGCTCTTATGGTCGCCCCTCACGCCATGGCCGGGTGGGAGACGTTTACCAACA
CCTACGATGCCCGTCCGATTTACCGCAGTGACGCGACGAACTGGCCGAAAGATCCCGGCCACGTTTTTGAGTATGGCTGG
AATCACACGACGCTCCGCGCGCTCAAGGTCGACCCGTCGATCACCTATCTTCAGATCGCATACGGCACCGACGATCCTGT
TTCTTTGGCCAAGACCACGCGGGATGAGCTAAGTCCCGAATGCCTGCAACACATTGAAGTCATGCGGCAAAATGGGCGCG
TTTCTATGGCCGGATTGACCCTGGTCAAGTTCCAGTCGGAAGAGCGGCTTGATGAAATCGTGGCGCTGCACGAGGCGAAA
GGGGCGATGAACTTCAACCCGCACCGCTACACCCTCGAGGAGGGCGGGCGTCAGGCGGTCGATACCCGACAGCTGGAATT
CAAGCGCGAGGCCGATCCGAAAGGCCTGCTCAATCCGGGCAAGATGATCTCGTGGGAGGATCCGGATTACAACTTCGACC
AGATGTATGCCTGGCCCGGCCTGCAATCGAAACCGGCGGCGGAGTGA

Upstream 100 bases:

>100_bases
AAGCGGTGGGGCAGAAAGCATCGCCCTCAAGCAGCGAAGCGGTAGGGCAGCACGCATCGCCCTCAAGCAGCGACGCGGTC
GGGCAGGGAGAGATCGCCAA

Downstream 100 bases:

>100_bases
ATGGCGAAGGCACTGGTAATCTACGCCCATCCGGTTCCGGAAAGCTTGGGCGGGGCCGCACATATGACTGTGGTTAACAC
CCTTAACAAAATGGGGTGGG

Product: FAD linked oxidase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MNIQAAIKTLQDKGIEVDLNPASVKSKSRDFFWYSPVLKDRLDHVVADFVATPHSEAQVIEILRVCYGHDVPVTTRGTGT
GNYGQAMPLAGGCVLHLHKMNAVKDIAPGRVVVEPGCLLKDLDAACIADSGQEIRMFSSTWATATIGGFIAGGSGGVGSV
RWGALRDPGNIIRLRVVTMEQEPRVMDITGDDLHRVSHAYGTNGIITEIEIPLAPAYDWVGVFVAFDSFDEALQYSYDLA
SCDGLLIKLATVFEAPIAKDYFQRVAPHVEAGEALVALMVAPHAMAGWETFTNTYDARPIYRSDATNWPKDPGHVFEYGW
NHTTLRALKVDPSITYLQIAYGTDDPVSLAKTTRDELSPECLQHIEVMRQNGRVSMAGLTLVKFQSEERLDEIVALHEAK
GAMNFNPHRYTLEEGGRQAVDTRQLEFKREADPKGLLNPGKMISWEDPDYNFDQMYAWPGLQSKPAAE

Sequences:

>Translated_468_residues
MNIQAAIKTLQDKGIEVDLNPASVKSKSRDFFWYSPVLKDRLDHVVADFVATPHSEAQVIEILRVCYGHDVPVTTRGTGT
GNYGQAMPLAGGCVLHLHKMNAVKDIAPGRVVVEPGCLLKDLDAACIADSGQEIRMFSSTWATATIGGFIAGGSGGVGSV
RWGALRDPGNIIRLRVVTMEQEPRVMDITGDDLHRVSHAYGTNGIITEIEIPLAPAYDWVGVFVAFDSFDEALQYSYDLA
SCDGLLIKLATVFEAPIAKDYFQRVAPHVEAGEALVALMVAPHAMAGWETFTNTYDARPIYRSDATNWPKDPGHVFEYGW
NHTTLRALKVDPSITYLQIAYGTDDPVSLAKTTRDELSPECLQHIEVMRQNGRVSMAGLTLVKFQSEERLDEIVALHEAK
GAMNFNPHRYTLEEGGRQAVDTRQLEFKREADPKGLLNPGKMISWEDPDYNFDQMYAWPGLQSKPAAE
>Mature_468_residues
MNIQAAIKTLQDKGIEVDLNPASVKSKSRDFFWYSPVLKDRLDHVVADFVATPHSEAQVIEILRVCYGHDVPVTTRGTGT
GNYGQAMPLAGGCVLHLHKMNAVKDIAPGRVVVEPGCLLKDLDAACIADSGQEIRMFSSTWATATIGGFIAGGSGGVGSV
RWGALRDPGNIIRLRVVTMEQEPRVMDITGDDLHRVSHAYGTNGIITEIEIPLAPAYDWVGVFVAFDSFDEALQYSYDLA
SCDGLLIKLATVFEAPIAKDYFQRVAPHVEAGEALVALMVAPHAMAGWETFTNTYDARPIYRSDATNWPKDPGHVFEYGW
NHTTLRALKVDPSITYLQIAYGTDDPVSLAKTTRDELSPECLQHIEVMRQNGRVSMAGLTLVKFQSEERLDEIVALHEAK
GAMNFNPHRYTLEEGGRQAVDTRQLEFKREADPKGLLNPGKMISWEDPDYNFDQMYAWPGLQSKPAAE

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI37595756, Length=201, Percent_Identity=31.3432835820896, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1789351, Length=194, Percent_Identity=31.4432989690722, Blast_Score=71, Evalue=1e-13,
Organism=Drosophila melanogaster, GI18921117, Length=200, Percent_Identity=28.5, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24639277, Length=200, Percent_Identity=28.5, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24639275, Length=200, Percent_Identity=28.5, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 51627; Mature: 51627

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQAAIKTLQDKGIEVDLNPASVKSKSRDFFWYSPVLKDRLDHVVADFVATPHSEAQVI
CCHHHHHHHHHHCCCEEECCHHHCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCHHHHH
EILRVCYGHDVPVTTRGTGTGNYGQAMPLAGGCVLHLHKMNAVKDIAPGRVVVEPGCLLK
HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCEEEECCCCHHH
DLDAACIADSGQEIRMFSSTWATATIGGFIAGGSGGVGSVRWGALRDPGNIIRLRVVTME
HCCHHHCCCCCCEEEEEECCCCHHHHCCEEECCCCCCCCEECCCCCCCCCEEEEEEEEEC
QEPRVMDITGDDLHRVSHAYGTNGIITEIEIPLAPAYDWVGVFVAFDSFDEALQYSYDLA
CCCCEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHCCCHH
SCDGLLIKLATVFEAPIAKDYFQRVAPHVEAGEALVALMVAPHAMAGWETFTNTYDARPI
CCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHCHHHHCCCCCCCCC
YRSDATNWPKDPGHVFEYGWNHTTLRALKVDPSITYLQIAYGTDDPVSLAKTTRDELSPE
CCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCEEEEEEEECCCCCHHHHHHHHHCCCHH
CLQHIEVMRQNGRVSMAGLTLVKFQSEERLDEIVALHEAKGAMNFNPHRYTLEEGGRQAV
HHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEHHHCCCCCC
DTRQLEFKREADPKGLLNPGKMISWEDPDYNFDQMYAWPGLQSKPAAE
CHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHEEECCCCCCCCCCC
>Mature Secondary Structure
MNIQAAIKTLQDKGIEVDLNPASVKSKSRDFFWYSPVLKDRLDHVVADFVATPHSEAQVI
CCHHHHHHHHHHCCCEEECCHHHCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCHHHHH
EILRVCYGHDVPVTTRGTGTGNYGQAMPLAGGCVLHLHKMNAVKDIAPGRVVVEPGCLLK
HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCEEEECCCCHHH
DLDAACIADSGQEIRMFSSTWATATIGGFIAGGSGGVGSVRWGALRDPGNIIRLRVVTME
HCCHHHCCCCCCEEEEEECCCCHHHHCCEEECCCCCCCCEECCCCCCCCCEEEEEEEEEC
QEPRVMDITGDDLHRVSHAYGTNGIITEIEIPLAPAYDWVGVFVAFDSFDEALQYSYDLA
CCCCEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHCCCHH
SCDGLLIKLATVFEAPIAKDYFQRVAPHVEAGEALVALMVAPHAMAGWETFTNTYDARPI
CCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHCHHHHCCCCCCCCC
YRSDATNWPKDPGHVFEYGWNHTTLRALKVDPSITYLQIAYGTDDPVSLAKTTRDELSPE
CCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCEEEEEEEECCCCCHHHHHHHHHCCCHH
CLQHIEVMRQNGRVSMAGLTLVKFQSEERLDEIVALHEAKGAMNFNPHRYTLEEGGRQAV
HHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEHHHCCCCCC
DTRQLEFKREADPKGLLNPGKMISWEDPDYNFDQMYAWPGLQSKPAAE
CHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]