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The map label for this gene is codA [H]

Identifier: 89053965

GI number: 89053965

Start: 1443259

End: 1444635

Strand: Direct

Name: codA [H]

Synonym: Jann_1474

Alternate gene names: 89053965

Gene position: 1443259-1444635 (Clockwise)

Preceding gene: 89053964

Following gene: 89053966

Centisome position: 33.42

GC content: 61.51

Gene sequence:

>1377_bases
ATGGATTTCAAGACGCTCCCCTCTGACAATCTGCGGTTGGAGAACGTGACGATTCCTGGGTGCCTGATCGGGCAATCGGG
CGTTGTGCGCACAGCGCTGAGTATCGCCGACGGTGTGATCGCCGCGAGTGGTGGCACGCCGGTCGATATGAGGGGGGCGA
TGGTGTTTCCCTGTTTCGTCGACATGCACACGCATCTGGACAAGGGCCATATCTGGCCCCGCTCGCCCAATCCCGACGGC
ACGTTCATGGGGGCGCTGGAGACGGTGCGCGCAGACAAATCGGGGCGGTGGGACAGTGTTGATCTGCCGCCGCGCATGAA
TTTCAGCCTGAACTGCGCCTACGCCCACGGCACGCGGGCCATTCGAACCCATCTGGACTATTTTGGAGAGACTGACGAGG
CGCGGGTCAGCTGGGACGTCTTCGCACAGATCCGTGACGACTGGGCCGGTCGGATTGATCTTCAGGCCGCTGTGTTGACG
GGGATCGACATGGCCGCTGATGCCGGCGCTTTGGCAACTTGCGCAGACCTTGTGGCGTCCCATGGCGGCGCTCTCGGGGC
CGTGACCTATCCGGAGCCGGACCTGCGCGCTTGGTTAACTGCATACTTTGAGGCGGCTGCGCTGCGTGGGATGGACCTGG
ATTTCCACGTGGATGAGACAATGGATCCAGAGGTTAACACCCTTAAGGATATTGCGGAAATTGTGCTAGAGACAGGATTT
AAAGGGAAAATCACCGTGGGCCATCTCTGCTCCCTGTCGGTGATGGAAGACGCGGTGGCCATGGCCACTCTTGATCTGGT
CGCCAAGGCCGGGCTCGATGTCGTCAGTCTGCCGATGTGCAACCTGTATCTGCAAGACCGCCACGCCGCGCGCACGCCGC
GAGGCCGGGGCATCACTTTGGTGCACGAGATGAAGGCGCGGGGCATCAACGTCAGTTTCGCCTCAGACAACACCCGAGAT
CCGTTCTATGCCTACGGTGATATGGACATGATCGAGGTGATGCGGGAGGCCACGCGCATTGGCCATCTGGACCACTCCGA
TGACGATTGGACCCATGCGTTTCTGGGCAATCCTGCCCGGGCCTGTGGCGTCACGGCACCGTCGTTGATGCCCGGAGCAC
CCGCCGATTTGGTGATTTGCCGCGCCCGCGAATGGACGGAACTTTTCGCCCGCCCGCAGGCTGACCGGATCGTGCTGCGT
GATGGGCGCCAGATTGATCGCGCTTTGCCGGATTACGCCGAATTGGATTACCTTATGACGCCCTCAAGCAGCGAAGCGGT
GGGGCAGAAAGCATCGCCCTCAAGCAGCGAAGCGGTAGGGCAGCACGCATCGCCCTCAAGCAGCGACGCGGTCGGGCAGG
GAGAGATCGCCAAATGA

Upstream 100 bases:

>100_bases
TGATCGCGGCCACGGGCGTGGTGATCTATGCCGCCACATCGCTGACGGCGCATCTTGCGCTGCGAAAGTGGCACGAGTCG
GCGCTGAAGAGGGAATGAGA

Downstream 100 bases:

>100_bases
ACATCCAGGCAGCTATAAAGACCCTTCAGGACAAGGGGATAGAGGTCGACCTTAATCCTGCTTCCGTCAAATCGAAATCC
CGCGACTTCTTTTGGTATTC

Product: cytosine deaminase-like protein

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MDFKTLPSDNLRLENVTIPGCLIGQSGVVRTALSIADGVIAASGGTPVDMRGAMVFPCFVDMHTHLDKGHIWPRSPNPDG
TFMGALETVRADKSGRWDSVDLPPRMNFSLNCAYAHGTRAIRTHLDYFGETDEARVSWDVFAQIRDDWAGRIDLQAAVLT
GIDMAADAGALATCADLVASHGGALGAVTYPEPDLRAWLTAYFEAAALRGMDLDFHVDETMDPEVNTLKDIAEIVLETGF
KGKITVGHLCSLSVMEDAVAMATLDLVAKAGLDVVSLPMCNLYLQDRHAARTPRGRGITLVHEMKARGINVSFASDNTRD
PFYAYGDMDMIEVMREATRIGHLDHSDDDWTHAFLGNPARACGVTAPSLMPGAPADLVICRAREWTELFARPQADRIVLR
DGRQIDRALPDYAELDYLMTPSSSEAVGQKASPSSSEAVGQHASPSSSDAVGQGEIAK

Sequences:

>Translated_458_residues
MDFKTLPSDNLRLENVTIPGCLIGQSGVVRTALSIADGVIAASGGTPVDMRGAMVFPCFVDMHTHLDKGHIWPRSPNPDG
TFMGALETVRADKSGRWDSVDLPPRMNFSLNCAYAHGTRAIRTHLDYFGETDEARVSWDVFAQIRDDWAGRIDLQAAVLT
GIDMAADAGALATCADLVASHGGALGAVTYPEPDLRAWLTAYFEAAALRGMDLDFHVDETMDPEVNTLKDIAEIVLETGF
KGKITVGHLCSLSVMEDAVAMATLDLVAKAGLDVVSLPMCNLYLQDRHAARTPRGRGITLVHEMKARGINVSFASDNTRD
PFYAYGDMDMIEVMREATRIGHLDHSDDDWTHAFLGNPARACGVTAPSLMPGAPADLVICRAREWTELFARPQADRIVLR
DGRQIDRALPDYAELDYLMTPSSSEAVGQKASPSSSEAVGQHASPSSSDAVGQGEIAK
>Mature_458_residues
MDFKTLPSDNLRLENVTIPGCLIGQSGVVRTALSIADGVIAASGGTPVDMRGAMVFPCFVDMHTHLDKGHIWPRSPNPDG
TFMGALETVRADKSGRWDSVDLPPRMNFSLNCAYAHGTRAIRTHLDYFGETDEARVSWDVFAQIRDDWAGRIDLQAAVLT
GIDMAADAGALATCADLVASHGGALGAVTYPEPDLRAWLTAYFEAAALRGMDLDFHVDETMDPEVNTLKDIAEIVLETGF
KGKITVGHLCSLSVMEDAVAMATLDLVAKAGLDVVSLPMCNLYLQDRHAARTPRGRGITLVHEMKARGINVSFASDNTRD
PFYAYGDMDMIEVMREATRIGHLDHSDDDWTHAFLGNPARACGVTAPSLMPGAPADLVICRAREWTELFARPQADRIVLR
DGRQIDRALPDYAELDYLMTPSSSEAVGQKASPSSSEAVGQHASPSSSDAVGQGEIAK

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=421, Percent_Identity=24.7030878859857, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 49446; Mature: 49446

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFKTLPSDNLRLENVTIPGCLIGQSGVVRTALSIADGVIAASGGTPVDMRGAMVFPCFV
CCCCCCCCCCEEEEEEECCCEEECCCCHHHHHHHHHCCEEECCCCCCCCCCCCEEEEEEH
DMHTHLDKGHIWPRSPNPDGTFMGALETVRADKSGRWDSVDLPPRMNFSLNCAYAHGTRA
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHH
IRTHLDYFGETDEARVSWDVFAQIRDDWAGRIDLQAAVLTGIDMAADAGALATCADLVAS
HHHHHHHCCCCCCCEEEHHHHHHHHHCCCCEEEEEEHHHHCCHHHCCCCHHHHHHHHHHH
HGGALGAVTYPEPDLRAWLTAYFEAAALRGMDLDFHVDETMDPEVNTLKDIAEIVLETGF
CCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCC
KGKITVGHLCSLSVMEDAVAMATLDLVAKAGLDVVSLPMCNLYLQDRHAARTPRGRGITL
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHEEEECCHHHCCCCCCCEEE
VHEMKARGINVSFASDNTRDPFYAYGDMDMIEVMREATRIGHLDHSDDDWTHAFLGNPAR
EEEHHHCCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHH
ACGVTAPSLMPGAPADLVICRAREWTELFARPQADRIVLRDGRQIDRALPDYAELDYLMT
HHCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCCCEEEECCCCHHHHHCCCHHHCCEEEC
PSSSEAVGQKASPSSSEAVGQHASPSSSDAVGQGEIAK
CCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDFKTLPSDNLRLENVTIPGCLIGQSGVVRTALSIADGVIAASGGTPVDMRGAMVFPCFV
CCCCCCCCCCEEEEEEECCCEEECCCCHHHHHHHHHCCEEECCCCCCCCCCCCEEEEEEH
DMHTHLDKGHIWPRSPNPDGTFMGALETVRADKSGRWDSVDLPPRMNFSLNCAYAHGTRA
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHH
IRTHLDYFGETDEARVSWDVFAQIRDDWAGRIDLQAAVLTGIDMAADAGALATCADLVAS
HHHHHHHCCCCCCCEEEHHHHHHHHHCCCCEEEEEEHHHHCCHHHCCCCHHHHHHHHHHH
HGGALGAVTYPEPDLRAWLTAYFEAAALRGMDLDFHVDETMDPEVNTLKDIAEIVLETGF
CCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCC
KGKITVGHLCSLSVMEDAVAMATLDLVAKAGLDVVSLPMCNLYLQDRHAARTPRGRGITL
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHEEEECCHHHCCCCCCCEEE
VHEMKARGINVSFASDNTRDPFYAYGDMDMIEVMREATRIGHLDHSDDDWTHAFLGNPAR
EEEHHHCCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHH
ACGVTAPSLMPGAPADLVICRAREWTELFARPQADRIVLRDGRQIDRALPDYAELDYLMT
HHCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCCCEEEECCCCHHHHHCCCHHHCCEEEC
PSSSEAVGQKASPSSSEAVGQHASPSSSDAVGQGEIAK
CCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]