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The map label for this gene is cytR [C]

Identifier: 89053946

GI number: 89053946

Start: 1424751

End: 1425821

Strand: Reverse

Name: cytR [C]

Synonym: Jann_1455

Alternate gene names: 89053946

Gene position: 1425821-1424751 (Counterclockwise)

Preceding gene: 89053950

Following gene: 89053945

Centisome position: 33.02

GC content: 64.52

Gene sequence:

>1071_bases
ATGAGACCGACTCAATCACAACTGGCGGAAGCCGCGGGCGTCTCCACCGCGACCGTGGATCGCGTGCTCAACGGCCGCTC
CGGCGTCTCCGCGCGCACACGGCAAATCGTGCATAATGCCGCCCGCCAGATCGGCTATTTGCCCGACGACCAGCCAAGCG
GCGCCCCCAAACGCCTGATCGCGATCCTGCCGAAGGGGAACAACGACTTCATCGACGATCTGCGGGCCCATCTCACGGCA
GAAGCGGCGATCATGCAGGGCGTGACGCTTGATCTGCCAAAGGTCTCCGGGCTCGAAATTGCGGCGACGGTTGATGCGCT
CGGCGCGGCCCGCGACACCGATGGGATCGCGGTCGTGGCACAAAGCCATCCCCGCGTTCACGATGCGCTTCTACGTCTGA
GTGCGCGAAAAGTGCCTGTCGTGACCCTTCTGTCAGACCTGCCCGACACATTGCGCCACGCCTATGTGGGCATCGACAAT
CTGCGCGCCGGTCGCCTGGCAGGAGAGGTCATCACCCGCTTTCTCGGCCCGAACCCTACGGGACAAATTGCCCTGTTTGC
CGGCGCATTGGCCTACCGGGGCCATCAGGAACGGGAAGTTGGCCTGCGTCAGTATCTTGCGGAGGAAGCGCCGGAACTCA
CGATCCTGGATATCCGCGAAAGTGGCGATGATCCGGACCGCGCCTTTGCCCAGGCCGCCGATAAGCTGCGCGATCACCCC
GGCCTTGCGGCGATTTACAACGCGGGCGGCGGCACGACCGGCATCGCACGTGCACTGCAAGATGCGGGGCGGGCCGATAC
CCTCATTTTCGTCGCCCATGAGGCGACCGAAGCCAACAAGGCGCTGCTGCTGGACGGCACACTGGATGCGATCATCGACC
AGAACGCCAAGCGCGAGGCGCAGGAAACGCTGCGCATATTGCTCGCCGCCGCACGCGGCACGACCCATCCGCCCACGCAA
CCGCTTCTGCATTTGATCCTGAGGGAAAACATCCCATCCGATGTGATCCCGACGCTACCGGACCCATCCCAACCAGAGCC
CGCCCACCACGACAGCGGCTACCCCGCCTAG

Upstream 100 bases:

>100_bases
TCACAATCTTCCCATTTGAGTACCTGTATACGCGTATAAACCCTTATTTTATTGGGATTTTGGTTGAAACCTCGGCTCCA
TCATTTTACATCATTGATCC

Downstream 100 bases:

>100_bases
GGCACACAGACCATGCCGCGGCACGACACGCCACGATACCAGAAGACATCCAGCGAAAGGAAAGGAACCCGACGATGCTT
GCTGACCGATTAGAGCGCAG

Product: regulatory protein, LacI

Products: NA

Alternate protein names: LacI Family Transcription Regulator; Regulatory Protein LacI; LacI Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Protein LacI Family; LacI Family Regulatory Protein; Transcriptional Regulator LacI Family Protein; Regulatory Protein LacI Family; LacI Regulatory Protein; Transcription Regulator Protein; HTH-Type Transcriptional Repressor PurR; Sugar ABC Transporter; Ribose ABC Transporter; HTH-Type Transcriptional Regulator MalR; Transcriptional Regulator Protein Laci-Family; ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Protein; Regulatory Protein; Laci-Related Transcriptional Regulator Protein; LacI Family Regulatory; HTH-Type Transcriptional Repressor Purr; Laci-Family Transcription Regulator; Transcriptional Regulatory Protein LacI Family; Transcription Regulator

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MRPTQSQLAEAAGVSTATVDRVLNGRSGVSARTRQIVHNAARQIGYLPDDQPSGAPKRLIAILPKGNNDFIDDLRAHLTA
EAAIMQGVTLDLPKVSGLEIAATVDALGAARDTDGIAVVAQSHPRVHDALLRLSARKVPVVTLLSDLPDTLRHAYVGIDN
LRAGRLAGEVITRFLGPNPTGQIALFAGALAYRGHQEREVGLRQYLAEEAPELTILDIRESGDDPDRAFAQAADKLRDHP
GLAAIYNAGGGTTGIARALQDAGRADTLIFVAHEATEANKALLLDGTLDAIIDQNAKREAQETLRILLAAARGTTHPPTQ
PLLHLILRENIPSDVIPTLPDPSQPEPAHHDSGYPA

Sequences:

>Translated_356_residues
MRPTQSQLAEAAGVSTATVDRVLNGRSGVSARTRQIVHNAARQIGYLPDDQPSGAPKRLIAILPKGNNDFIDDLRAHLTA
EAAIMQGVTLDLPKVSGLEIAATVDALGAARDTDGIAVVAQSHPRVHDALLRLSARKVPVVTLLSDLPDTLRHAYVGIDN
LRAGRLAGEVITRFLGPNPTGQIALFAGALAYRGHQEREVGLRQYLAEEAPELTILDIRESGDDPDRAFAQAADKLRDHP
GLAAIYNAGGGTTGIARALQDAGRADTLIFVAHEATEANKALLLDGTLDAIIDQNAKREAQETLRILLAAARGTTHPPTQ
PLLHLILRENIPSDVIPTLPDPSQPEPAHHDSGYPA
>Mature_356_residues
MRPTQSQLAEAAGVSTATVDRVLNGRSGVSARTRQIVHNAARQIGYLPDDQPSGAPKRLIAILPKGNNDFIDDLRAHLTA
EAAIMQGVTLDLPKVSGLEIAATVDALGAARDTDGIAVVAQSHPRVHDALLRLSARKVPVVTLLSDLPDTLRHAYVGIDN
LRAGRLAGEVITRFLGPNPTGQIALFAGALAYRGHQEREVGLRQYLAEEAPELTILDIRESGDDPDRAFAQAADKLRDHP
GLAAIYNAGGGTTGIARALQDAGRADTLIFVAHEATEANKALLLDGTLDAIIDQNAKREAQETLRILLAAARGTTHPPTQ
PLLHLILRENIPSDVIPTLPDPSQPEPAHHDSGYPA

Specific function: This Protein Negatively Controls The Transcription Initiation Of Genes Such As Deocabd, Udp, And Cdd Encoding Catabolizing Enzymes And Nupc, Nupg, And Tsx Encoding Transporting And Pore-Forming Proteins. Binds Cytidine And Adenosine As Effectors. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37854; Mature: 37854

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS50932 HTH_LACI_2 ; PS00455 AMP_BINDING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPTQSQLAEAAGVSTATVDRVLNGRSGVSARTRQIVHNAARQIGYLPDDQPSGAPKRLI
CCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
AILPKGNNDFIDDLRAHLTAEAAIMQGVTLDLPKVSGLEIAATVDALGAARDTDGIAVVA
EEEECCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEE
QSHPRVHDALLRLSARKVPVVTLLSDLPDTLRHAYVGIDNLRAGRLAGEVITRFLGPNPT
CCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
GQIALFAGALAYRGHQEREVGLRQYLAEEAPELTILDIRESGDDPDRAFAQAADKLRDHP
CCEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC
GLAAIYNAGGGTTGIARALQDAGRADTLIFVAHEATEANKALLLDGTLDAIIDQNAKREA
CEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCHHHHHHCCCHHHHH
QETLRILLAAARGTTHPPTQPLLHLILRENIPSDVIPTLPDPSQPEPAHHDSGYPA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRPTQSQLAEAAGVSTATVDRVLNGRSGVSARTRQIVHNAARQIGYLPDDQPSGAPKRLI
CCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
AILPKGNNDFIDDLRAHLTAEAAIMQGVTLDLPKVSGLEIAATVDALGAARDTDGIAVVA
EEEECCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEE
QSHPRVHDALLRLSARKVPVVTLLSDLPDTLRHAYVGIDNLRAGRLAGEVITRFLGPNPT
CCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
GQIALFAGALAYRGHQEREVGLRQYLAEEAPELTILDIRESGDDPDRAFAQAADKLRDHP
CCEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC
GLAAIYNAGGGTTGIARALQDAGRADTLIFVAHEATEANKALLLDGTLDAIIDQNAKREA
CEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCHHHHHHCCCHHHHH
QETLRILLAAARGTTHPPTQPLLHLILRENIPSDVIPTLPDPSQPEPAHHDSGYPA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA