| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89053932
Identifier: 89053932
GI number: 89053932
Start: 1408677
End: 1409552
Strand: Reverse
Name: 89053932
Synonym: Jann_1441
Alternate gene names: NA
Gene position: 1409552-1408677 (Counterclockwise)
Preceding gene: 89053933
Following gene: 89053931
Centisome position: 32.64
GC content: 63.81
Gene sequence:
>876_bases ATGCATCCCGCCCCCTCCGTCATCATCTTCACCACGCTCTCGGGCCTGGGCTTCGGCCTTCTGGTCTTCCTCGGCCTGGG CATGCCCTCCAACCTCAGCGCCTTCACCGCGTTCATCTTCTTCGCCATCGCCTACCTGCTGTCCGTCGGTGGGCTTGCCG CCTCCACCTTCCATCTGGGCCACCCGGAGCGGGCGTGGAAAGCGTTTTCCCAATGGCGCACGTCCTGGCTGTCGCGCGAA GGCATCTGTGCCGTGGCCGCCCTTATTATCATGGCCATCTACGGTGCGGGCCTTGTGTTCTTTCAGGCCCAATGGATCGT CCTCGGCTACCTCGGTGCGGCGCTCAGCCTCGGCACGGTCTTCACCACATCCATGATCTACGCGCAGATGAAATCCGTCC CGCGCTGGCATATGCCCTGGACGCCCGCAAAATTCCTGACCCTGTCACTGGCGGGTGGCGCGCTTCTGGCAGGCCAAGTG ACTTTGGCCATCGTCCTGCTGCTGCTGGCGAGCGCCATCACCATCGCCACCTGGATCATCGGCGACGGCCAGTTCGCGAA ATCCGGCACCGATATGGAGACGGCCACGGGTCTCGGTTCCATCGGCAAGGTCACGGCGTTTGAGCCGCCGCACACCGGCA CCAACTACCTGATGCGCGAATTCATCCACGTCGTGGGCCGCAAACACAGCCTGAAACTGCGCGTGATCGCCGCCGTGCTG GCCTTCGGCGTGCCCATCGTGCTTCTCCTCCTGCCCTTCGGGCATGTCCTCGCAGCTTTAGCCGTCATCAGCCACATCGC AGGCGTCGCCACTGCCCGCTGGCTGTTCTTCGCAGAGGCCGAGCATGTGGTGGGGCTGTATTACGGGAAGCGGTGA
Upstream 100 bases:
>100_bases ACCTGCCGGAATTCGACGTCCTGGCCCCCTACCTTGAACCCGTCACTGAGACCCCCGGCGGCTTCATCGGCTGGCTCGAC CGCGCGCTGGAGAAAATCTG
Downstream 100 bases:
>100_bases GGGCGCGCGCCGCGCTTGTTTTCCGGTGCGACCTGAGGCTCAGTAGACCCAAGGCAATCGCGCCCTCGCTTCGGCAAACT GAAGGGCGCAAGGGCTGGCG
Product: DMSO reductase anchor subunit (DmsC)
Products: NA
Alternate protein names: Dmso Reductase Anchor Subunit; DMSO Reductase Chain C; Anaerobic Dimethyl Sulfoxide Reductase C Subunit; Dimethyl Sulfoxide Reductase Subunit C; DMSO Reductase Subunit C; Dimethyl Sulfoxide Reductase C Subunit
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MHPAPSVIIFTTLSGLGFGLLVFLGLGMPSNLSAFTAFIFFAIAYLLSVGGLAASTFHLGHPERAWKAFSQWRTSWLSRE GICAVAALIIMAIYGAGLVFFQAQWIVLGYLGAALSLGTVFTTSMIYAQMKSVPRWHMPWTPAKFLTLSLAGGALLAGQV TLAIVLLLLASAITIATWIIGDGQFAKSGTDMETATGLGSIGKVTAFEPPHTGTNYLMREFIHVVGRKHSLKLRVIAAVL AFGVPIVLLLLPFGHVLAALAVISHIAGVATARWLFFAEAEHVVGLYYGKR
Sequences:
>Translated_291_residues MHPAPSVIIFTTLSGLGFGLLVFLGLGMPSNLSAFTAFIFFAIAYLLSVGGLAASTFHLGHPERAWKAFSQWRTSWLSRE GICAVAALIIMAIYGAGLVFFQAQWIVLGYLGAALSLGTVFTTSMIYAQMKSVPRWHMPWTPAKFLTLSLAGGALLAGQV TLAIVLLLLASAITIATWIIGDGQFAKSGTDMETATGLGSIGKVTAFEPPHTGTNYLMREFIHVVGRKHSLKLRVIAAVL AFGVPIVLLLLPFGHVLAALAVISHIAGVATARWLFFAEAEHVVGLYYGKR >Mature_291_residues MHPAPSVIIFTTLSGLGFGLLVFLGLGMPSNLSAFTAFIFFAIAYLLSVGGLAASTFHLGHPERAWKAFSQWRTSWLSRE GICAVAALIIMAIYGAGLVFFQAQWIVLGYLGAALSLGTVFTTSMIYAQMKSVPRWHMPWTPAKFLTLSLAGGALLAGQV TLAIVLLLLASAITIATWIIGDGQFAKSGTDMETATGLGSIGKVTAFEPPHTGTNYLMREFIHVVGRKHSLKLRVIAAVL AFGVPIVLLLLPFGHVLAALAVISHIAGVATARWLFFAEAEHVVGLYYGKR
Specific function: Unknown
COG id: COG3302
COG function: function code R; DMSO reductase anchor subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31089; Mature: 31089
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPAPSVIIFTTLSGLGFGLLVFLGLGMPSNLSAFTAFIFFAIAYLLSVGGLAASTFHLG CCCCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHEECC HPERAWKAFSQWRTSWLSREGICAVAALIIMAIYGAGLVFFQAQWIVLGYLGAALSLGTV CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTTSMIYAQMKSVPRWHMPWTPAKFLTLSLAGGALLAGQVTLAIVLLLLASAITIATWII HHHHHHHHHHHCCCCCCCCCCHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GDGQFAKSGTDMETATGLGSIGKVTAFEPPHTGTNYLMREFIHVVGRKHSLKLRVIAAVL CCCCCCCCCCCCHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH AFGVPIVLLLLPFGHVLAALAVISHIAGVATARWLFFAEAEHVVGLYYGKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC >Mature Secondary Structure MHPAPSVIIFTTLSGLGFGLLVFLGLGMPSNLSAFTAFIFFAIAYLLSVGGLAASTFHLG CCCCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHEECC HPERAWKAFSQWRTSWLSREGICAVAALIIMAIYGAGLVFFQAQWIVLGYLGAALSLGTV CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTTSMIYAQMKSVPRWHMPWTPAKFLTLSLAGGALLAGQVTLAIVLLLLASAITIATWII HHHHHHHHHHHCCCCCCCCCCHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GDGQFAKSGTDMETATGLGSIGKVTAFEPPHTGTNYLMREFIHVVGRKHSLKLRVIAAVL CCCCCCCCCCCCHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH AFGVPIVLLLLPFGHVLAALAVISHIAGVATARWLFFAEAEHVVGLYYGKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA