| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053927
Identifier: 89053927
GI number: 89053927
Start: 1403871
End: 1405121
Strand: Reverse
Name: 89053927
Synonym: Jann_1436
Alternate gene names: NA
Gene position: 1405121-1403871 (Counterclockwise)
Preceding gene: 89053928
Following gene: 89053926
Centisome position: 32.54
GC content: 65.87
Gene sequence:
>1251_bases ATGTCCGACCTGATCAAAAGCTGGCTCCCCTCCGCCAACACCGCCACGACCGAATTTCCCCTCAACAACCTGCCCTACGG CGTCTTTTCCGCGGGCGACGGGGACCTGCGCTGTGGGGTGGCCATTGGCGACCGGATCGTGGATGTCACGGGGCTGGAGG CGGCGGGCCACCTGCGCGCGGATCCCGACGCCGATGTGCTGGATGCGCCTTACTGGAACGACTTCATGGAACTCGGCCCC GTCGTCTGGCAGGCCTACCGGCTGGCGCTGACCGCGATCCTGGCCGAGGATGCCAGCGATGAAGTCCAGGACCTGATCAC CACCTTCTCCGTGCCGATGGCCCAGGCGACCCTGCACATGCCCTTCAAGGTCGCGGAATACACCGACTTCTACGCCGGTC GCCACCACGCCACCAATGTCGGCACCATGTTCCGGGGCGCGGAAAACGCGCTGCCGCCCAATTGGCTGCACATGCCCATC GGCTACAATGGGCGTGCGTCCTCGGTCGTCGTCTCCGGCACCGACATCCGCCGCCCTTGGGGGCAGTTGAAAGCGCCCGA CGCGGACCTGCCAATCTTCGCGCCCTCCAAACGCTTCGATATCGAGCTGGAACTGGGTGCCATCGTGGGCACCGCTTCCG ACGGTCCCCTCACCGTCGATCAGGCGTTCGACAATATCTTCGGCTATGTGCTGCTCAACGATTGGTCCGCGCGCGATATT CAGGCCTGGGAATACCAGCCCCTTGGACCGTTCCAAGCCAAGGCCACCGCCACAACCATCAGCCCCTGGATCGTTCCAGC CGAGGCGCTGGCCCCCTTCCGCACCGCCACGCCCGCCCGCGAACACGCGCTGCTGCCGCACCTCGCCGACACCACACCGA TGAACCACGACATCACCCTGTCCGTGACCCTCAACGGCGCGGAAATCGCGCAGACCAACGCCAATGAGCTTTACTATTCC GCCGCCCAGCAGCTGGCCCACCACGCCACCGCGGGCGGCCCGATGCGCACCGGCGATCTTCTGGGCTCCGGCACCATCTC CGGCCCCGAAAAACGCAATCGCGGCTCGCTTCTGGAACTCTCCTGGGGCGGGAAAGAGCCTCTGGACACCGCCTCCGGCC CCCGCTCCTTCATTGAAGACGGCGACACCCTCGCCCTGCACGGTGCGTCCAAAGGCGACGGCTATCAGATCGGCTTCGGC CCCTGCATCGGCACGGTTCTGCCTGCCCTCGACGATCCCTTCCAGACCTAA
Upstream 100 bases:
>100_bases CCCGACGCACCCTAACCCGCCCGTCCTCTTGCCCAAAACGCGCCCCGCCGTCCCCGGATATGGGGCGCCGATCCGCCACA CGCCCTAACGAAAGCCCGAC
Downstream 100 bases:
>100_bases GCCCTTTCCCCGTTCTTCAAATATCCCCGCCGGAGGCTCCGACACCTCCCACGGGACCGACCCTCAAAGGAAAACACACC ATGGCCAAAGCCTTCGCCTC
Product: fumarylacetoacetate hydrolase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Hydroxylase; Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Hydrolase; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomerase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MSDLIKSWLPSANTATTEFPLNNLPYGVFSAGDGDLRCGVAIGDRIVDVTGLEAAGHLRADPDADVLDAPYWNDFMELGP VVWQAYRLALTAILAEDASDEVQDLITTFSVPMAQATLHMPFKVAEYTDFYAGRHHATNVGTMFRGAENALPPNWLHMPI GYNGRASSVVVSGTDIRRPWGQLKAPDADLPIFAPSKRFDIELELGAIVGTASDGPLTVDQAFDNIFGYVLLNDWSARDI QAWEYQPLGPFQAKATATTISPWIVPAEALAPFRTATPAREHALLPHLADTTPMNHDITLSVTLNGAEIAQTNANELYYS AAQQLAHHATAGGPMRTGDLLGSGTISGPEKRNRGSLLELSWGGKEPLDTASGPRSFIEDGDTLALHGASKGDGYQIGFG PCIGTVLPALDDPFQT
Sequences:
>Translated_416_residues MSDLIKSWLPSANTATTEFPLNNLPYGVFSAGDGDLRCGVAIGDRIVDVTGLEAAGHLRADPDADVLDAPYWNDFMELGP VVWQAYRLALTAILAEDASDEVQDLITTFSVPMAQATLHMPFKVAEYTDFYAGRHHATNVGTMFRGAENALPPNWLHMPI GYNGRASSVVVSGTDIRRPWGQLKAPDADLPIFAPSKRFDIELELGAIVGTASDGPLTVDQAFDNIFGYVLLNDWSARDI QAWEYQPLGPFQAKATATTISPWIVPAEALAPFRTATPAREHALLPHLADTTPMNHDITLSVTLNGAEIAQTNANELYYS AAQQLAHHATAGGPMRTGDLLGSGTISGPEKRNRGSLLELSWGGKEPLDTASGPRSFIEDGDTLALHGASKGDGYQIGFG PCIGTVLPALDDPFQT >Mature_415_residues SDLIKSWLPSANTATTEFPLNNLPYGVFSAGDGDLRCGVAIGDRIVDVTGLEAAGHLRADPDADVLDAPYWNDFMELGPV VWQAYRLALTAILAEDASDEVQDLITTFSVPMAQATLHMPFKVAEYTDFYAGRHHATNVGTMFRGAENALPPNWLHMPIG YNGRASSVVVSGTDIRRPWGQLKAPDADLPIFAPSKRFDIELELGAIVGTASDGPLTVDQAFDNIFGYVLLNDWSARDIQ AWEYQPLGPFQAKATATTISPWIVPAEALAPFRTATPAREHALLPHLADTTPMNHDITLSVTLNGAEIAQTNANELYYSA AQQLAHHATAGGPMRTGDLLGSGTISGPEKRNRGSLLELSWGGKEPLDTASGPRSFIEDGDTLALHGASKGDGYQIGFGP CIGTVLPALDDPFQT
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=420, Percent_Identity=48.5714285714286, Blast_Score=385, Evalue=1e-107, Organism=Caenorhabditis elegans, GI17568863, Length=409, Percent_Identity=46.6992665036675, Blast_Score=356, Evalue=2e-98, Organism=Drosophila melanogaster, GI24657182, Length=405, Percent_Identity=45.679012345679, Blast_Score=348, Evalue=3e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 44596; Mature: 44465
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLIKSWLPSANTATTEFPLNNLPYGVFSAGDGDLRCGVAIGDRIVDVTGLEAAGHLRA CHHHHHHHCCCCCCCEEECCCCCCCCCEEECCCCCEEEEEEECCEEEEEECCCCCCCCCC DPDADVLDAPYWNDFMELGPVVWQAYRLALTAILAEDASDEVQDLITTFSVPMAQATLHM CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHEEEC PFKVAEYTDFYAGRHHATNVGTMFRGAENALPPNWLHMPIGYNGRASSVVVSGTDIRRPW CEEEHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCC GQLKAPDADLPIFAPSKRFDIELELGAIVGTASDGPLTVDQAFDNIFGYVLLNDWSARDI CCCCCCCCCCCEECCCCCEEEEEEEEEEEECCCCCCEEHHHHHHHHEEEEEEECCCCCCC QAWEYQPLGPFQAKATATTISPWIVPAEALAPFRTATPAREHALLPHLADTTPMNHDITL CCCCCCCCCCCCCCCEEEECCCCEECHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCEEE SVTLNGAEIAQTNANELYYSAAQQLAHHATAGGPMRTGDLLGSGTISGPEKRNRGSLLEL EEEECCHHEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE SWGGKEPLDTASGPRSFIEDGDTLALHGASKGDGYQIGFGPCIGTVLPALDDPFQT ECCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCEEEECHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDLIKSWLPSANTATTEFPLNNLPYGVFSAGDGDLRCGVAIGDRIVDVTGLEAAGHLRA HHHHHHHCCCCCCCEEECCCCCCCCCEEECCCCCEEEEEEECCEEEEEECCCCCCCCCC DPDADVLDAPYWNDFMELGPVVWQAYRLALTAILAEDASDEVQDLITTFSVPMAQATLHM CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHEEEC PFKVAEYTDFYAGRHHATNVGTMFRGAENALPPNWLHMPIGYNGRASSVVVSGTDIRRPW CEEEHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCC GQLKAPDADLPIFAPSKRFDIELELGAIVGTASDGPLTVDQAFDNIFGYVLLNDWSARDI CCCCCCCCCCCEECCCCCEEEEEEEEEEEECCCCCCEEHHHHHHHHEEEEEEECCCCCCC QAWEYQPLGPFQAKATATTISPWIVPAEALAPFRTATPAREHALLPHLADTTPMNHDITL CCCCCCCCCCCCCCCEEEECCCCEECHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCEEE SVTLNGAEIAQTNANELYYSAAQQLAHHATAGGPMRTGDLLGSGTISGPEKRNRGSLLEL EEEECCHHEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE SWGGKEPLDTASGPRSFIEDGDTLALHGASKGDGYQIGFGPCIGTVLPALDDPFQT ECCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCEEEECHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA