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The map label for this gene is 89053916

Identifier: 89053916

GI number: 89053916

Start: 1394837

End: 1395787

Strand: Direct

Name: 89053916

Synonym: Jann_1425

Alternate gene names: NA

Gene position: 1394837-1395787 (Clockwise)

Preceding gene: 89053914

Following gene: 89053917

Centisome position: 32.3

GC content: 63.72

Gene sequence:

>951_bases
ATGAACGCATTTTTCAAAACCCTGGCTGTTTCCGCCGTCGCCCTGATGGGTGCCACGGCCGTGAACGCCGACGGCCATAT
CGGCGGGGAGCGCTATGTGCTGGTCAGCCACGCGCCCGACAGTGACAGCTGGTGGAACACGATCCGCAACGCCCTGACAC
TGGCGGGCGAGCAGATGGATGTGGAAGTGGAATACCGCAACCCGCCTACCGGTGACATCGCCGACATGGCGCGTCTGATC
GAGCAGGCGGCGGCCTCTGGCCCCGACGGCATCATCACGACGCTGGCGGACCCGACGGTTCTGAACGATTCCATTCGCGC
CGCCGTAGATGCGGGCATCGACGTGATCATCATGAATTCCGGCACGCCGGAGCAGGCGCGCGACGTGGGCGCTTTGATGT
ATGTGGGTCAGCCCGAATATGACGCAGGTTTTGCCGCCGGTCAGCGCGCGGCAGGCGATGGCGTGACCAGCTTCCTGTGC
GTGAACCACGTGATCTCCAACCCCGTCGTGGCCGAGCGCTGCAACGGCTTTGCGGACGGTCTGGGCGTGGATCTGGGCGA
CAGCATGATCGACGCAGGTCAAGACCCGCAGGAGATCCAGAACCGGGTCATGGCGTATCTGAATGCCAACCCCGATACGG
ACGGCATCCTGACGCTCGGGCCGACCTCTGCCGATCCCACCATCCTGGCGCTGGAAGAGCTTGGCCTGGCCGGTGACATC
TACTTCGGCACGTTTGATCTGGGCGAAAACATCGTGGCGGGCATCCGCGACGGCGTGATCGAATGGGGCATCGACCAGCA
GCCGTTCCTGCAGGCCTACCTGCCGGTCGTCGTGATGACCAACTATCACCGCTATGGCGTGCTGCCGGGCAACAACATCA
ACTCCGGCCCCGGTTTCATCACCGCTGACGGTCTGGAGCTGGTGGAAGCGCTGGCGGGCGAATACCGCTAA

Upstream 100 bases:

>100_bases
AATCGCGGCTACGCTTTTCGGCAAGGCGGGCACGGCCCACGGCAATGGCCCATCGACCCGCCCCCGGCCTTTAACGGGCA
AGACCTTTTGGGAGGAACTT

Downstream 100 bases:

>100_bases
CGCGCCGGTTGAGGCTTTGATCTGCCCCGGATGCGGGGCGTGATTTCGGGGCAGGCGGCGGAGACGTTGCCTGCCCTTTT
TCCATCCAAAGACACGCATA

Product: periplasmic binding protein/LacI transcriptional regulator

Products: NA

Alternate protein names: ABC-Type Sugar Transport System; Sugar ABC Transporter Periplasmic Component-Like Protein; Ribose ABC Transporter; Twin-Arginine Translocation Pathway Signal; ABC Transporter; Sugar ABC Transporter Periplasmic Protein; Lipoprotein

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MNAFFKTLAVSAVALMGATAVNADGHIGGERYVLVSHAPDSDSWWNTIRNALTLAGEQMDVEVEYRNPPTGDIADMARLI
EQAAASGPDGIITTLADPTVLNDSIRAAVDAGIDVIIMNSGTPEQARDVGALMYVGQPEYDAGFAAGQRAAGDGVTSFLC
VNHVISNPVVAERCNGFADGLGVDLGDSMIDAGQDPQEIQNRVMAYLNANPDTDGILTLGPTSADPTILALEELGLAGDI
YFGTFDLGENIVAGIRDGVIEWGIDQQPFLQAYLPVVVMTNYHRYGVLPGNNINSGPGFITADGLELVEALAGEYR

Sequences:

>Translated_316_residues
MNAFFKTLAVSAVALMGATAVNADGHIGGERYVLVSHAPDSDSWWNTIRNALTLAGEQMDVEVEYRNPPTGDIADMARLI
EQAAASGPDGIITTLADPTVLNDSIRAAVDAGIDVIIMNSGTPEQARDVGALMYVGQPEYDAGFAAGQRAAGDGVTSFLC
VNHVISNPVVAERCNGFADGLGVDLGDSMIDAGQDPQEIQNRVMAYLNANPDTDGILTLGPTSADPTILALEELGLAGDI
YFGTFDLGENIVAGIRDGVIEWGIDQQPFLQAYLPVVVMTNYHRYGVLPGNNINSGPGFITADGLELVEALAGEYR
>Mature_316_residues
MNAFFKTLAVSAVALMGATAVNADGHIGGERYVLVSHAPDSDSWWNTIRNALTLAGEQMDVEVEYRNPPTGDIADMARLI
EQAAASGPDGIITTLADPTVLNDSIRAAVDAGIDVIIMNSGTPEQARDVGALMYVGQPEYDAGFAAGQRAAGDGVTSFLC
VNHVISNPVVAERCNGFADGLGVDLGDSMIDAGQDPQEIQNRVMAYLNANPDTDGILTLGPTSADPTILALEELGLAGDI
YFGTFDLGENIVAGIRDGVIEWGIDQQPFLQAYLPVVVMTNYHRYGVLPGNNINSGPGFITADGLELVEALAGEYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33261; Mature: 33261

Theoretical pI: Translated: 3.80; Mature: 3.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAFFKTLAVSAVALMGATAVNADGHIGGERYVLVSHAPDSDSWWNTIRNALTLAGEQMD
CCHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEE
VEVEYRNPPTGDIADMARLIEQAAASGPDGIITTLADPTVLNDSIRAAVDAGIDVIIMNS
EEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHCCEEEEEECC
GTPEQARDVGALMYVGQPEYDAGFAAGQRAAGDGVTSFLCVNHVISNPVVAERCNGFADG
CCCHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHCC
LGVDLGDSMIDAGQDPQEIQNRVMAYLNANPDTDGILTLGPTSADPTILALEELGLAGDI
CCCCCCCHHHHCCCCHHHHHHHHEEEECCCCCCCCEEEECCCCCCCEEEEHHHCCCCCEE
YFGTFDLGENIVAGIRDGVIEWGIDQQPFLQAYLPVVVMTNYHRYGVLPGNNINSGPGFI
EEEEHHCCHHHHHHHHHCHHCCCCCCCHHHHHHHCHHEEECCCEEECCCCCCCCCCCCEE
TADGLELVEALAGEYR
EECHHHHHHHHHCCCC
>Mature Secondary Structure
MNAFFKTLAVSAVALMGATAVNADGHIGGERYVLVSHAPDSDSWWNTIRNALTLAGEQMD
CCHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEE
VEVEYRNPPTGDIADMARLIEQAAASGPDGIITTLADPTVLNDSIRAAVDAGIDVIIMNS
EEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHCCEEEEEECC
GTPEQARDVGALMYVGQPEYDAGFAAGQRAAGDGVTSFLCVNHVISNPVVAERCNGFADG
CCCHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHCC
LGVDLGDSMIDAGQDPQEIQNRVMAYLNANPDTDGILTLGPTSADPTILALEELGLAGDI
CCCCCCCHHHHCCCCHHHHHHHHEEEECCCCCCCCEEEECCCCCCCEEEEHHHCCCCCEE
YFGTFDLGENIVAGIRDGVIEWGIDQQPFLQAYLPVVVMTNYHRYGVLPGNNINSGPGFI
EEEEHHCCHHHHHHHHHCHHCCCCCCCHHHHHHHCHHEEECCCEEECCCCCCCCCCCCEE
TADGLELVEALAGEYR
EECHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA