Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053905

Identifier: 89053905

GI number: 89053905

Start: 1383603

End: 1384511

Strand: Direct

Name: 89053905

Synonym: Jann_1414

Alternate gene names: NA

Gene position: 1383603-1384511 (Clockwise)

Preceding gene: 89053904

Following gene: 89053906

Centisome position: 32.04

GC content: 63.48

Gene sequence:

>909_bases
TTGCTCGCCTTCTGCGCCCGCCATGGCCGTTGGGGCCTTGTGGTGGGGCTTCTGGCCGGGCTGGCGCTGCCTGGCCTCGC
GCAGGCTATGCGCCCCTGGTTGCCCCATATGGTGGCCGGACTGCTGTTCATCACAGCCTTCCGTGTGGGATATCGCGGGT
CTGTCGGGCAATTGCGCGCTGCACCGCGTGTCTTGGCAGAGGTTCTGGTGCTGCAACTGGGCTTGCCGCTTCTGGCGTTG
GCTGTCGTCTTCGCTTTTGGCCTGTCGACGACCACAGTGGCGCTTGCGATCGTCCTGATGCTCTCCGCCCCCTCGATCAG
CGGGTCGCCGAATTTTTCGGTCCTGGTGGGCCATGACCCCGCACCCGCCATGCAAATCATGGTCCTGGGCATGGCTGTCT
TCCCGTTAACGATCCTGCCGGTGCTCTTCCTCCTCGGTCCCGCATTCGGAGATACCAGCGGTGTCATATCCACCAGCTTG
CGCCTGATCATGATCATTTTTGCGGCGACGGGCCTCGGGTTTCTGGCCCGCGCATGGCTCTTGCCAGACGCGACACGAGC
CCAAATCCAAAGCCTCGACGGGGCAGGGGTGGTGGCATTGGTCGTGATCGTCGTGGGCCTGATGGCAGGCATCCGCCCGG
TGTTCGCGGAGGCGCCCTTGGCCCTCGTCGGTTGGGTCGCACTGGTCTTTGCGGCCAACTTTGGCCTTCAAATACTAGCC
TTTCGGCTCACCCCAACGGGCCCCCGCGCCGTTCCCTTCAGCCTGATCGCGGGCAATCGGAACGTGGCCCTTTTCCTTCT
GGCCCTGCCGCCAGACCTGACCGACCGCCTCCTGCCGTTCATCGGATGTTACCAACTGCCGATGTATTTAACCCCTTTGG
TCATGGCGCGATTTTACCGCGCGCGTTGA

Upstream 100 bases:

>100_bases
TGTTCATGATCATGGTCCTGATGTGCTTCGTCCTGATCTGGATCCCGGATCTGGCGATGTGGCTGCCCGAGACGATGCGG
TCGACGCCAGGGGGATGACA

Downstream 100 bases:

>100_bases
ATAGCCATTGCTGCGCGGCCCGCGCTTTGGCAGGTGTTGGACATGCAATTGATTGACCCCGAGCACCCCTTTTTTCAACC
CGCATGGCGGCGGTGGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MLAFCARHGRWGLVVGLLAGLALPGLAQAMRPWLPHMVAGLLFITAFRVGYRGSVGQLRAAPRVLAEVLVLQLGLPLLAL
AVVFAFGLSTTTVALAIVLMLSAPSISGSPNFSVLVGHDPAPAMQIMVLGMAVFPLTILPVLFLLGPAFGDTSGVISTSL
RLIMIIFAATGLGFLARAWLLPDATRAQIQSLDGAGVVALVVIVVGLMAGIRPVFAEAPLALVGWVALVFAANFGLQILA
FRLTPTGPRAVPFSLIAGNRNVALFLLALPPDLTDRLLPFIGCYQLPMYLTPLVMARFYRAR

Sequences:

>Translated_302_residues
MLAFCARHGRWGLVVGLLAGLALPGLAQAMRPWLPHMVAGLLFITAFRVGYRGSVGQLRAAPRVLAEVLVLQLGLPLLAL
AVVFAFGLSTTTVALAIVLMLSAPSISGSPNFSVLVGHDPAPAMQIMVLGMAVFPLTILPVLFLLGPAFGDTSGVISTSL
RLIMIIFAATGLGFLARAWLLPDATRAQIQSLDGAGVVALVVIVVGLMAGIRPVFAEAPLALVGWVALVFAANFGLQILA
FRLTPTGPRAVPFSLIAGNRNVALFLLALPPDLTDRLLPFIGCYQLPMYLTPLVMARFYRAR
>Mature_302_residues
MLAFCARHGRWGLVVGLLAGLALPGLAQAMRPWLPHMVAGLLFITAFRVGYRGSVGQLRAAPRVLAEVLVLQLGLPLLAL
AVVFAFGLSTTTVALAIVLMLSAPSISGSPNFSVLVGHDPAPAMQIMVLGMAVFPLTILPVLFLLGPAFGDTSGVISTSL
RLIMIIFAATGLGFLARAWLLPDATRAQIQSLDGAGVVALVVIVVGLMAGIRPVFAEAPLALVGWVALVFAANFGLQILA
FRLTPTGPRAVPFSLIAGNRNVALFLLALPPDLTDRLLPFIGCYQLPMYLTPLVMARFYRAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31869; Mature: 31869

Theoretical pI: Translated: 11.82; Mature: 11.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAFCARHGRWGLVVGLLAGLALPGLAQAMRPWLPHMVAGLLFITAFRVGYRGSVGQLRA
CCCEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
APRVLAEVLVLQLGLPLLALAVVFAFGLSTTTVALAIVLMLSAPSISGSPNFSVLVGHDP
HHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
APAMQIMVLGMAVFPLTILPVLFLLGPAFGDTSGVISTSLRLIMIIFAATGLGFLARAWL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPDATRAQIQSLDGAGVVALVVIVVGLMAGIRPVFAEAPLALVGWVALVFAANFGLQILA
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHCCCCEEEE
FRLTPTGPRAVPFSLIAGNRNVALFLLALPPDLTDRLLPFIGCYQLPMYLTPLVMARFYR
EEECCCCCCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AR
CC
>Mature Secondary Structure
MLAFCARHGRWGLVVGLLAGLALPGLAQAMRPWLPHMVAGLLFITAFRVGYRGSVGQLRA
CCCEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
APRVLAEVLVLQLGLPLLALAVVFAFGLSTTTVALAIVLMLSAPSISGSPNFSVLVGHDP
HHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
APAMQIMVLGMAVFPLTILPVLFLLGPAFGDTSGVISTSLRLIMIIFAATGLGFLARAWL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPDATRAQIQSLDGAGVVALVVIVVGLMAGIRPVFAEAPLALVGWVALVFAANFGLQILA
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHCCCCEEEE
FRLTPTGPRAVPFSLIAGNRNVALFLLALPPDLTDRLLPFIGCYQLPMYLTPLVMARFYR
EEECCCCCCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA