| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053905
Identifier: 89053905
GI number: 89053905
Start: 1383603
End: 1384511
Strand: Direct
Name: 89053905
Synonym: Jann_1414
Alternate gene names: NA
Gene position: 1383603-1384511 (Clockwise)
Preceding gene: 89053904
Following gene: 89053906
Centisome position: 32.04
GC content: 63.48
Gene sequence:
>909_bases TTGCTCGCCTTCTGCGCCCGCCATGGCCGTTGGGGCCTTGTGGTGGGGCTTCTGGCCGGGCTGGCGCTGCCTGGCCTCGC GCAGGCTATGCGCCCCTGGTTGCCCCATATGGTGGCCGGACTGCTGTTCATCACAGCCTTCCGTGTGGGATATCGCGGGT CTGTCGGGCAATTGCGCGCTGCACCGCGTGTCTTGGCAGAGGTTCTGGTGCTGCAACTGGGCTTGCCGCTTCTGGCGTTG GCTGTCGTCTTCGCTTTTGGCCTGTCGACGACCACAGTGGCGCTTGCGATCGTCCTGATGCTCTCCGCCCCCTCGATCAG CGGGTCGCCGAATTTTTCGGTCCTGGTGGGCCATGACCCCGCACCCGCCATGCAAATCATGGTCCTGGGCATGGCTGTCT TCCCGTTAACGATCCTGCCGGTGCTCTTCCTCCTCGGTCCCGCATTCGGAGATACCAGCGGTGTCATATCCACCAGCTTG CGCCTGATCATGATCATTTTTGCGGCGACGGGCCTCGGGTTTCTGGCCCGCGCATGGCTCTTGCCAGACGCGACACGAGC CCAAATCCAAAGCCTCGACGGGGCAGGGGTGGTGGCATTGGTCGTGATCGTCGTGGGCCTGATGGCAGGCATCCGCCCGG TGTTCGCGGAGGCGCCCTTGGCCCTCGTCGGTTGGGTCGCACTGGTCTTTGCGGCCAACTTTGGCCTTCAAATACTAGCC TTTCGGCTCACCCCAACGGGCCCCCGCGCCGTTCCCTTCAGCCTGATCGCGGGCAATCGGAACGTGGCCCTTTTCCTTCT GGCCCTGCCGCCAGACCTGACCGACCGCCTCCTGCCGTTCATCGGATGTTACCAACTGCCGATGTATTTAACCCCTTTGG TCATGGCGCGATTTTACCGCGCGCGTTGA
Upstream 100 bases:
>100_bases TGTTCATGATCATGGTCCTGATGTGCTTCGTCCTGATCTGGATCCCGGATCTGGCGATGTGGCTGCCCGAGACGATGCGG TCGACGCCAGGGGGATGACA
Downstream 100 bases:
>100_bases ATAGCCATTGCTGCGCGGCCCGCGCTTTGGCAGGTGTTGGACATGCAATTGATTGACCCCGAGCACCCCTTTTTTCAACC CGCATGGCGGCGGTGGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MLAFCARHGRWGLVVGLLAGLALPGLAQAMRPWLPHMVAGLLFITAFRVGYRGSVGQLRAAPRVLAEVLVLQLGLPLLAL AVVFAFGLSTTTVALAIVLMLSAPSISGSPNFSVLVGHDPAPAMQIMVLGMAVFPLTILPVLFLLGPAFGDTSGVISTSL RLIMIIFAATGLGFLARAWLLPDATRAQIQSLDGAGVVALVVIVVGLMAGIRPVFAEAPLALVGWVALVFAANFGLQILA FRLTPTGPRAVPFSLIAGNRNVALFLLALPPDLTDRLLPFIGCYQLPMYLTPLVMARFYRAR
Sequences:
>Translated_302_residues MLAFCARHGRWGLVVGLLAGLALPGLAQAMRPWLPHMVAGLLFITAFRVGYRGSVGQLRAAPRVLAEVLVLQLGLPLLAL AVVFAFGLSTTTVALAIVLMLSAPSISGSPNFSVLVGHDPAPAMQIMVLGMAVFPLTILPVLFLLGPAFGDTSGVISTSL RLIMIIFAATGLGFLARAWLLPDATRAQIQSLDGAGVVALVVIVVGLMAGIRPVFAEAPLALVGWVALVFAANFGLQILA FRLTPTGPRAVPFSLIAGNRNVALFLLALPPDLTDRLLPFIGCYQLPMYLTPLVMARFYRAR >Mature_302_residues MLAFCARHGRWGLVVGLLAGLALPGLAQAMRPWLPHMVAGLLFITAFRVGYRGSVGQLRAAPRVLAEVLVLQLGLPLLAL AVVFAFGLSTTTVALAIVLMLSAPSISGSPNFSVLVGHDPAPAMQIMVLGMAVFPLTILPVLFLLGPAFGDTSGVISTSL RLIMIIFAATGLGFLARAWLLPDATRAQIQSLDGAGVVALVVIVVGLMAGIRPVFAEAPLALVGWVALVFAANFGLQILA FRLTPTGPRAVPFSLIAGNRNVALFLLALPPDLTDRLLPFIGCYQLPMYLTPLVMARFYRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31869; Mature: 31869
Theoretical pI: Translated: 11.82; Mature: 11.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAFCARHGRWGLVVGLLAGLALPGLAQAMRPWLPHMVAGLLFITAFRVGYRGSVGQLRA CCCEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH APRVLAEVLVLQLGLPLLALAVVFAFGLSTTTVALAIVLMLSAPSISGSPNFSVLVGHDP HHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC APAMQIMVLGMAVFPLTILPVLFLLGPAFGDTSGVISTSLRLIMIIFAATGLGFLARAWL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LPDATRAQIQSLDGAGVVALVVIVVGLMAGIRPVFAEAPLALVGWVALVFAANFGLQILA CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHCCCCEEEE FRLTPTGPRAVPFSLIAGNRNVALFLLALPPDLTDRLLPFIGCYQLPMYLTPLVMARFYR EEECCCCCCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AR CC >Mature Secondary Structure MLAFCARHGRWGLVVGLLAGLALPGLAQAMRPWLPHMVAGLLFITAFRVGYRGSVGQLRA CCCEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH APRVLAEVLVLQLGLPLLALAVVFAFGLSTTTVALAIVLMLSAPSISGSPNFSVLVGHDP HHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC APAMQIMVLGMAVFPLTILPVLFLLGPAFGDTSGVISTSLRLIMIIFAATGLGFLARAWL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LPDATRAQIQSLDGAGVVALVVIVVGLMAGIRPVFAEAPLALVGWVALVFAANFGLQILA CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHCCCCEEEE FRLTPTGPRAVPFSLIAGNRNVALFLLALPPDLTDRLLPFIGCYQLPMYLTPLVMARFYR EEECCCCCCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA