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The map label for this gene is yiaN [C]

Identifier: 89053904

GI number: 89053904

Start: 1382287

End: 1383600

Strand: Direct

Name: yiaN [C]

Synonym: Jann_1413

Alternate gene names: 89053904

Gene position: 1382287-1383600 (Clockwise)

Preceding gene: 89053903

Following gene: 89053905

Centisome position: 32.01

GC content: 59.44

Gene sequence:

>1314_bases
ATGACCGAAGTCTATGCCATTATCCTGTTTCTGTTCGTTCTTTTCTTCCTTCTGGGCACGGGTGTCTGGGTTGGTGTGGC
GCTTATGGGCGTGGCCTGGGTGGGGATGGAATTGTTCACCACGCGGCCCGTGGGCGACACAATGGTCACGACCATTTGGG
CCACGTCATCGTCCTGGACACTGACGGCCCTGCCGCTGTTCATCTGGATGGGAGAGATCCTGTACCGTACCCGTCTGTCC
GAGGATATGTTTCGCGGCCTCTCCCCGTGGCTCGCGCGTCTTCCCGGTGGCCTTGTGCACACGAATATCGTTGGTTGTAC
GGTTTTTGCCGCCGTGTCCGGATCTTCCGCCGCGACGCTGACAACGGTCGGCAAGATGTCGATCCCCGAGCTTCGGGCGC
GCAAGTACCCCGAACATATCGTCATCGGTACGCTTGCGGGCGCGGCGACCCTTGGCCTGATGATCCCGCCGTCGCTCGCG
CTGATCGTCTATGGCGTCGCCGTGAACCAATCCATCACCGAATTGTTCTTCGCAGGCGTCTTCCCGGGCCTCGTCCTGGC
CCTGATGTTCATGGGTTACGTCGCGGCTTATTCCGTGATTTCAAAGGGCTGGCAGCCGACGTTAGAGACGGCCATGAGCT
TTGGGGAGAAGCTGCGCAACTCCCGTTTCCTGATCCCCGTGATCCTGCTGATCATGGTCGTCATCGGCTCCATGTACACC
GGGACAGCCACCGCAACAGAAGCGGCAGCCATTGGTGTCATCGGCTCACTCCTACTGGCGGCATCTCAAGGTTCGCTCAA
CTGGGGCAGTTTTCGCGAAAGCCTCATGGGGGCCACGCGCACGTCGGCCATGATCATGCTGATCCTTGCGGGGGCTGCGT
TCCTTAAGCTGTCCATGGGGTTCACCGGTTTGCCGCGCGCGCTGGCAGACGGGATTGGCGCGCTGGATCTGACGCGGTTC
GAATTGCTGATGATGCTGCTGGTTTTCTACATCATCTTGGGCATGTTCCTTGATGGCATCTCTTCGGTCGTACTGACCAT
GGCAGTGGTGGAGCCGATGGTGGTGGAGGCCGGTATCGACCTGATATGGTTCGGAATATTCGTGATCGTCGTGGTGGAGA
TGGCACAGATTACACCCCCCATCGGCTTCAACCTCTTCGTTTTGCAAGGCATGACGGGGCACGAGATGGGCTACATCGCC
AAGGCGGCTCTGCCGATGTTCATGATCATGGTCCTGATGTGCTTCGTCCTGATCTGGATCCCGGATCTGGCGATGTGGCT
GCCCGAGACGATGCGGTCGACGCCAGGGGGATGA

Upstream 100 bases:

>100_bases
CTGCTGATCGCCTTCTTCGACAACCTCGTTTCCGTCCTTCTCAAGGGCAACCACCGCATCGGCGACAACACCGTCGATCA
AAGCTTCGGGGAATGATCCG

Downstream 100 bases:

>100_bases
CATTGCTCGCCTTCTGCGCCCGCCATGGCCGTTGGGGCCTTGTGGTGGGGCTTCTGGCCGGGCTGGCGCTGCCTGGCCTC
GCGCAGGCTATGCGCCCCTG

Product: TRAP C4-dicarboxylate transport system permease DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MTEVYAIILFLFVLFFLLGTGVWVGVALMGVAWVGMELFTTRPVGDTMVTTIWATSSSWTLTALPLFIWMGEILYRTRLS
EDMFRGLSPWLARLPGGLVHTNIVGCTVFAAVSGSSAATLTTVGKMSIPELRARKYPEHIVIGTLAGAATLGLMIPPSLA
LIVYGVAVNQSITELFFAGVFPGLVLALMFMGYVAAYSVISKGWQPTLETAMSFGEKLRNSRFLIPVILLIMVVIGSMYT
GTATATEAAAIGVIGSLLLAASQGSLNWGSFRESLMGATRTSAMIMLILAGAAFLKLSMGFTGLPRALADGIGALDLTRF
ELLMMLLVFYIILGMFLDGISSVVLTMAVVEPMVVEAGIDLIWFGIFVIVVVEMAQITPPIGFNLFVLQGMTGHEMGYIA
KAALPMFMIMVLMCFVLIWIPDLAMWLPETMRSTPGG

Sequences:

>Translated_437_residues
MTEVYAIILFLFVLFFLLGTGVWVGVALMGVAWVGMELFTTRPVGDTMVTTIWATSSSWTLTALPLFIWMGEILYRTRLS
EDMFRGLSPWLARLPGGLVHTNIVGCTVFAAVSGSSAATLTTVGKMSIPELRARKYPEHIVIGTLAGAATLGLMIPPSLA
LIVYGVAVNQSITELFFAGVFPGLVLALMFMGYVAAYSVISKGWQPTLETAMSFGEKLRNSRFLIPVILLIMVVIGSMYT
GTATATEAAAIGVIGSLLLAASQGSLNWGSFRESLMGATRTSAMIMLILAGAAFLKLSMGFTGLPRALADGIGALDLTRF
ELLMMLLVFYIILGMFLDGISSVVLTMAVVEPMVVEAGIDLIWFGIFVIVVVEMAQITPPIGFNLFVLQGMTGHEMGYIA
KAALPMFMIMVLMCFVLIWIPDLAMWLPETMRSTPGG
>Mature_436_residues
TEVYAIILFLFVLFFLLGTGVWVGVALMGVAWVGMELFTTRPVGDTMVTTIWATSSSWTLTALPLFIWMGEILYRTRLSE
DMFRGLSPWLARLPGGLVHTNIVGCTVFAAVSGSSAATLTTVGKMSIPELRARKYPEHIVIGTLAGAATLGLMIPPSLAL
IVYGVAVNQSITELFFAGVFPGLVLALMFMGYVAAYSVISKGWQPTLETAMSFGEKLRNSRFLIPVILLIMVVIGSMYTG
TATATEAAAIGVIGSLLLAASQGSLNWGSFRESLMGATRTSAMIMLILAGAAFLKLSMGFTGLPRALADGIGALDLTRFE
LLMMLLVFYIILGMFLDGISSVVLTMAVVEPMVVEAGIDLIWFGIFVIVVVEMAQITPPIGFNLFVLQGMTGHEMGYIAK
AALPMFMIMVLMCFVLIWIPDLAMWLPETMRSTPGG

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=398, Percent_Identity=25.8793969849246, Blast_Score=104, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 47043; Mature: 46912

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEVYAIILFLFVLFFLLGTGVWVGVALMGVAWVGMELFTTRPVGDTMVTTIWATSSSWT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEECCCCCH
LTALPLFIWMGEILYRTRLSEDMFRGLSPWLARLPGGLVHTNIVGCTVFAAVSGSSAATL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEH
TTVGKMSIPELRARKYPEHIVIGTLAGAATLGLMIPPSLALIVYGVAVNQSITELFFAGV
HECCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
FPGLVLALMFMGYVAAYSVISKGWQPTLETAMSFGEKLRNSRFLIPVILLIMVVIGSMYT
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
GTATATEAAAIGVIGSLLLAASQGSLNWGSFRESLMGATRTSAMIMLILAGAAFLKLSMG
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FTGLPRALADGIGALDLTRFELLMMLLVFYIILGMFLDGISSVVLTMAVVEPMVVEAGID
CCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIWFGIFVIVVVEMAQITPPIGFNLFVLQGMTGHEMGYIAKAALPMFMIMVLMCFVLIWI
HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
PDLAMWLPETMRSTPGG
HHHHHHCCHHHHCCCCC
>Mature Secondary Structure 
TEVYAIILFLFVLFFLLGTGVWVGVALMGVAWVGMELFTTRPVGDTMVTTIWATSSSWT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEECCCCCH
LTALPLFIWMGEILYRTRLSEDMFRGLSPWLARLPGGLVHTNIVGCTVFAAVSGSSAATL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEH
TTVGKMSIPELRARKYPEHIVIGTLAGAATLGLMIPPSLALIVYGVAVNQSITELFFAGV
HECCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
FPGLVLALMFMGYVAAYSVISKGWQPTLETAMSFGEKLRNSRFLIPVILLIMVVIGSMYT
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
GTATATEAAAIGVIGSLLLAASQGSLNWGSFRESLMGATRTSAMIMLILAGAAFLKLSMG
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FTGLPRALADGIGALDLTRFELLMMLLVFYIILGMFLDGISSVVLTMAVVEPMVVEAGID
CCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIWFGIFVIVVVEMAQITPPIGFNLFVLQGMTGHEMGYIAKAALPMFMIMVLMCFVLIWI
HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
PDLAMWLPETMRSTPGG
HHHHHHCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]