Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053895

Identifier: 89053895

GI number: 89053895

Start: 1373398

End: 1374132

Strand: Reverse

Name: 89053895

Synonym: Jann_1404

Alternate gene names: NA

Gene position: 1374132-1373398 (Counterclockwise)

Preceding gene: 89053896

Following gene: 89053888

Centisome position: 31.82

GC content: 62.04

Gene sequence:

>735_bases
ATGACACGGGGCGGCAAAACCGTCTTCGGGGCCAGCGTCGGCATCCTGATGCTGGAAACGCAATTCCCGCGCATCCCCGG
CGATATCGGCAATGCGCTGACATGGCCGTTTCCGGTGCATTACAAGGTCGTGCCCGGCGCCACGCCAGATAACATCGTGC
GCGGCGATCCATGGACCCGTGCACAGGATTTCATCAAGGCGGGCAAGGAGTTGGTGGCCATGGGCTGCGACGGGGTGGCG
ACGAATTGCGGCTTCCTCGCGCTTCTGCAAGATGAGATGAAAGAGGCCTTGGGCGTGCCGGTCGCCACATCGTCCCTGAT
CCAGGCTCCGATGATTTCGGCCATTCTGCCGCCGGGCAAACATATGACCATACTGACGATCTCCGCCGATACGTTAACCC
GCGCGCATCTGGACGCCGCCGGGGTGCCGGAGGGGACACCCGTTGTAGGCACCGAAGGCGGCCGGGAGTTCACCCGCGCG
GTTCTGGGCGATGAGATCGAGATCAACTTTGAAGCGGCCCGTGCAGACATGCTGGAGGCCGCCGAAGCGCTTGTGACATC
CTACCCAGACACCGGAGCGATCTTGCTCGAATGCACCAACATGGTGCCCTATGCCGCTGATATCAGGCATAGAAGCGGGC
TTCCGGTCTATTCCGTCTACAGCCTTCTGACATGGTTTCACGCGGGCTTGACGCCACGCCGCTTTCCGGTGGATCTGGAC
GACCCCCGTCCTTAG

Upstream 100 bases:

>100_bases
GCGCACTGGCCGCCTTGCGTGCCCATATCGAGCTGCGGAAAGAGGACGCCACACAGGCCGTCCGCACGGCATTCTCCGAA
ATCTACGTGCAGGCGAGCTG

Downstream 100 bases:

>100_bases
GCCCGGATAGCGTCGGCCAACTGATTGTGCCCCAGCGACGTCGCGCCGATCTGCGCCAGCGTGATACTTGTCTCGTCTTT
CAACACAGACCACAGCTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTRGGKTVFGASVGILMLETQFPRIPGDIGNALTWPFPVHYKVVPGATPDNIVRGDPWTRAQDFIKAGKELVAMGCDGVA
TNCGFLALLQDEMKEALGVPVATSSLIQAPMISAILPPGKHMTILTISADTLTRAHLDAAGVPEGTPVVGTEGGREFTRA
VLGDEIEINFEAARADMLEAAEALVTSYPDTGAILLECTNMVPYAADIRHRSGLPVYSVYSLLTWFHAGLTPRRFPVDLD
DPRP

Sequences:

>Translated_244_residues
MTRGGKTVFGASVGILMLETQFPRIPGDIGNALTWPFPVHYKVVPGATPDNIVRGDPWTRAQDFIKAGKELVAMGCDGVA
TNCGFLALLQDEMKEALGVPVATSSLIQAPMISAILPPGKHMTILTISADTLTRAHLDAAGVPEGTPVVGTEGGREFTRA
VLGDEIEINFEAARADMLEAAEALVTSYPDTGAILLECTNMVPYAADIRHRSGLPVYSVYSLLTWFHAGLTPRRFPVDLD
DPRP
>Mature_243_residues
TRGGKTVFGASVGILMLETQFPRIPGDIGNALTWPFPVHYKVVPGATPDNIVRGDPWTRAQDFIKAGKELVAMGCDGVAT
NCGFLALLQDEMKEALGVPVATSSLIQAPMISAILPPGKHMTILTISADTLTRAHLDAAGVPEGTPVVGTEGGREFTRAV
LGDEIEINFEAARADMLEAAEALVTSYPDTGAILLECTNMVPYAADIRHRSGLPVYSVYSLLTWFHAGLTPRRFPVDLDD
PRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26099; Mature: 25968

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGGKTVFGASVGILMLETQFPRIPGDIGNALTWPFPVHYKVVPGATPDNIVRGDPWTR
CCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHH
AQDFIKAGKELVAMGCDGVATNCGFLALLQDEMKEALGVPVATSSLIQAPMISAILPPGK
HHHHHHCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
HMTILTISADTLTRAHLDAAGVPEGTPVVGTEGGREFTRAVLGDEIEINFEAARADMLEA
CEEEEEEECCHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHCCCCEEEEHHHHHHHHHHH
AEALVTSYPDTGAILLECTNMVPYAADIRHRSGLPVYSVYSLLTWFHAGLTPRRFPVDLD
HHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
DPRP
CCCC
>Mature Secondary Structure 
TRGGKTVFGASVGILMLETQFPRIPGDIGNALTWPFPVHYKVVPGATPDNIVRGDPWTR
CCCCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHH
AQDFIKAGKELVAMGCDGVATNCGFLALLQDEMKEALGVPVATSSLIQAPMISAILPPGK
HHHHHHCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
HMTILTISADTLTRAHLDAAGVPEGTPVVGTEGGREFTRAVLGDEIEINFEAARADMLEA
CEEEEEEECCHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHCCCCEEEEHHHHHHHHHHH
AEALVTSYPDTGAILLECTNMVPYAADIRHRSGLPVYSVYSLLTWFHAGLTPRRFPVDLD
HHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
DPRP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA