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The map label for this gene is 89053830

Identifier: 89053830

GI number: 89053830

Start: 1305598

End: 1306092

Strand: Reverse

Name: 89053830

Synonym: Jann_1339

Alternate gene names: NA

Gene position: 1306092-1305598 (Counterclockwise)

Preceding gene: 89053831

Following gene: 89053829

Centisome position: 30.25

GC content: 59.8

Gene sequence:

>495_bases
GTGTCCACCCTCTTCAAACGTGTTGTTCAAGTGCCGACCGCAATGGCGGCGCTGGCGCTGTTCGCGCTGATGGTCATCAC
CTTCACCGACGTGATGTTGCGCTCGATCTTCAACGCCCCGATCGAGACCCGCGCGGACCTGACGCGGGTGCTGATGGCCG
TCACTGTCTTCTCGGTGATGCCGATCCTGTCCGCACGTGGGGGGCAGATCAGCGTTGATCTCCTGGATGGATTTTTCAAC
AGGTTCAACCTGGCGCGCTGGCGGAATGCGATGGTGGACCTGGCCTGCGGGGTGATGTTGATCCGGCCCACGCAGCGCGT
CTGGGTCTTGGCCGAACGCAGCAGATCTTACGGGGACGTCATGGAATATCTTGGACTGTCCGTGCATTATCTCGGCTGGT
TCATTGCCGTCATGATCGGCATCACCGCCCTTGTCCTCATTTTGCGCGGGCTCATGTGGGCCTTTGCGCCACAACTGGTG
CCATCTGATGTTTGA

Upstream 100 bases:

>100_bases
TCGTCGATGCAATGGCAGAAGTGTCTGCCGAATAAGCGCCGCTTCTCCTGGCCCCGCCGCCAAAATCGGCGGGGCCCTGT
CTTTGACGGAGCGTTCGCCC

Downstream 100 bases:

>100_bases
GGGTCTGATCGGGTTCGTGGCCGTCCTGGCGCTTGTCTTGCTACGCCTGCCAATCGCCTTCGCGATGGGGTTCGTCGGCA
TGATAGGCTTCATGATCGAC

Product: TRAP dicarboxylate transporter subunit DctQ

Products: NA

Alternate protein names: TRAP Dicarboxylate Transporter DctQ Subunit; TRAP Dicarboxylate Transporter Family Protein DctQ Subunit; Tripartite ATP-Independent Periplasmic

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSTLFKRVVQVPTAMAALALFALMVITFTDVMLRSIFNAPIETRADLTRVLMAVTVFSVMPILSARGGQISVDLLDGFFN
RFNLARWRNAMVDLACGVMLIRPTQRVWVLAERSRSYGDVMEYLGLSVHYLGWFIAVMIGITALVLILRGLMWAFAPQLV
PSDV

Sequences:

>Translated_164_residues
MSTLFKRVVQVPTAMAALALFALMVITFTDVMLRSIFNAPIETRADLTRVLMAVTVFSVMPILSARGGQISVDLLDGFFN
RFNLARWRNAMVDLACGVMLIRPTQRVWVLAERSRSYGDVMEYLGLSVHYLGWFIAVMIGITALVLILRGLMWAFAPQLV
PSDV
>Mature_163_residues
STLFKRVVQVPTAMAALALFALMVITFTDVMLRSIFNAPIETRADLTRVLMAVTVFSVMPILSARGGQISVDLLDGFFNR
FNLARWRNAMVDLACGVMLIRPTQRVWVLAERSRSYGDVMEYLGLSVHYLGWFIAVMIGITALVLILRGLMWAFAPQLVP
SDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18330; Mature: 18199

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLFKRVVQVPTAMAALALFALMVITFTDVMLRSIFNAPIETRADLTRVLMAVTVFSVM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
PILSARGGQISVDLLDGFFNRFNLARWRNAMVDLACGVMLIRPTQRVWVLAERSRSYGDV
HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH
MEYLGLSVHYLGWFIAVMIGITALVLILRGLMWAFAPQLVPSDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STLFKRVVQVPTAMAALALFALMVITFTDVMLRSIFNAPIETRADLTRVLMAVTVFSVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
PILSARGGQISVDLLDGFFNRFNLARWRNAMVDLACGVMLIRPTQRVWVLAERSRSYGDV
HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH
MEYLGLSVHYLGWFIAVMIGITALVLILRGLMWAFAPQLVPSDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA