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The map label for this gene is ycdL [C]

Identifier: 89053780

GI number: 89053780

Start: 1251841

End: 1252473

Strand: Reverse

Name: ycdL [C]

Synonym: Jann_1289

Alternate gene names: 89053780

Gene position: 1252473-1251841 (Counterclockwise)

Preceding gene: 89053781

Following gene: 89053779

Centisome position: 29.01

GC content: 54.5

Gene sequence:

>633_bases
ATGACGACGAAGACCAAAACAGCGAGGAATCTCATCGAAGGTCGCCCTGCGCTCATCGTGATCGACATTCAAAAAAGTAC
CTTCATCGACAACAGCGAAGTGCGGTCCATCGACAATATGCCGGGCTACAAGGATCGTATGATCGCGGCGCGCGATCTGG
TCGACGCCGCGCATGAAAACGATATTCCCGTCATCTTCATCCAGGAAGTCCATCGTCCCGATCTGGTCGATTTCGGTCGG
GAATTGGATGGCGATGAGGATGTTCATTGCCTTGAGGGTGATCCGCGCACCGAAGTCGCCAAAGAGGAAATGGGGTTCCG
CAAAGGCGACTACATCATCCCAAAGCGACGGTATTCGGCATTCTTTGGAACTGATTTTGAGATTCTGTTGCGTGGCTTGA
ATGTCGACACGCTGCTCTTGTGCGGTGGGCTGACAGACGTTTGCGTCCACTACACATTCGTGGATGGGCACCAGTCCGAT
TACTTCTGTCGGGTGGCGGAGAATTGCGTCGGCGGCTCGTCAGTGGAGGCACATGAGGCGGCGCTCAAAGCGATGGAGTA
TCTGCAAACCGGTGCGGTTCAGGATCGGGCCACGATTATCGAAGCAATGTCGTTGCACGAATGTGCGGACTGA

Upstream 100 bases:

>100_bases
TCAAAACCTCAGCTGGTCGGGTATTGCAGGTTTGGCACTTCTGATTGCGGGGATGTTTCTGCTCGGGTCAGATGCGCACT
AAGACGGAAGGACATGGACC

Downstream 100 bases:

>100_bases
CCGAGCAGGACATAAATGTCGTTCATTGCAGCTTAAACAGTCATTCGCACGTTGCGCAGCATTTGGGAGGTAAGGGCTTC
AAGCCGCCATTCTCGGCCGT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase; Isochorismatase Family Protein; Nicotinamidase-Like Amidase; N-Carbamoylsarcosine Amidase; N-Carbamoylsarcosine Amidase Related Protein; Pyrimidine Utilization Protein B

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTTKTKTARNLIEGRPALIVIDIQKSTFIDNSEVRSIDNMPGYKDRMIAARDLVDAAHENDIPVIFIQEVHRPDLVDFGR
ELDGDEDVHCLEGDPRTEVAKEEMGFRKGDYIIPKRRYSAFFGTDFEILLRGLNVDTLLLCGGLTDVCVHYTFVDGHQSD
YFCRVAENCVGGSSVEAHEAALKAMEYLQTGAVQDRATIIEAMSLHECAD

Sequences:

>Translated_210_residues
MTTKTKTARNLIEGRPALIVIDIQKSTFIDNSEVRSIDNMPGYKDRMIAARDLVDAAHENDIPVIFIQEVHRPDLVDFGR
ELDGDEDVHCLEGDPRTEVAKEEMGFRKGDYIIPKRRYSAFFGTDFEILLRGLNVDTLLLCGGLTDVCVHYTFVDGHQSD
YFCRVAENCVGGSSVEAHEAALKAMEYLQTGAVQDRATIIEAMSLHECAD
>Mature_209_residues
TTKTKTARNLIEGRPALIVIDIQKSTFIDNSEVRSIDNMPGYKDRMIAARDLVDAAHENDIPVIFIQEVHRPDLVDFGRE
LDGDEDVHCLEGDPRTEVAKEEMGFRKGDYIIPKRRYSAFFGTDFEILLRGLNVDTLLLCGGLTDVCVHYTFVDGHQSDY
FCRVAENCVGGSSVEAHEAALKAMEYLQTGAVQDRATIIEAMSLHECAD

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23488; Mature: 23357

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKTKTARNLIEGRPALIVIDIQKSTFIDNSEVRSIDNMPGYKDRMIAARDLVDAAHEN
CCCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
DIPVIFIQEVHRPDLVDFGRELDGDEDVHCLEGDPRTEVAKEEMGFRKGDYIIPKRRYSA
CCCEEEEECCCCCCHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEECCCHHHHH
FFGTDFEILLRGLNVDTLLLCGGLTDVCVHYTFVDGHQSDYFCRVAENCVGGSSVEAHEA
HCCCCHHHHHCCCCCCEEEEECCHHHHHEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHH
ALKAMEYLQTGAVQDRATIIEAMSLHECAD
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTKTKTARNLIEGRPALIVIDIQKSTFIDNSEVRSIDNMPGYKDRMIAARDLVDAAHEN
CCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
DIPVIFIQEVHRPDLVDFGRELDGDEDVHCLEGDPRTEVAKEEMGFRKGDYIIPKRRYSA
CCCEEEEECCCCCCHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEECCCHHHHH
FFGTDFEILLRGLNVDTLLLCGGLTDVCVHYTFVDGHQSDYFCRVAENCVGGSSVEAHEA
HCCCCHHHHHCCCCCCEEEEECCHHHHHEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHH
ALKAMEYLQTGAVQDRATIIEAMSLHECAD
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA