Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053779

Identifier: 89053779

GI number: 89053779

Start: 1250598

End: 1251389

Strand: Reverse

Name: 89053779

Synonym: Jann_1288

Alternate gene names: NA

Gene position: 1251389-1250598 (Counterclockwise)

Preceding gene: 89053780

Following gene: 89053771

Centisome position: 28.98

GC content: 49.37

Gene sequence:

>792_bases
ATGAACGAGTACGAAGACGAATTTGTCAATACCCGGGGTCCAACCTTTAAAGATTTTGAGAATGTGACGGCAGAACAATA
TCGGACTTTTCTGCTATTCAATGCAAACAAGCACTGGATCAACTTATCTAGACGAGGCAACGCAGCCGCCGAGGATATGG
ATACCCTGCGCCATGTTCCGAAAACATTGGCCAGTGATGCACCGCTAGCTAATCGCTTCGATGCTGCATCGGGTGCGGTA
GAAGGAGTTGGCCGCGGGATCGCTTCTGCATTGCTGGTCGTCATGCAAACAGAAGATTGTGGGGTTTGGAACGGCACTTC
CGAAGATGGCTTAAAGCGCCTTCATTTGTGGCCAGGGGCTGGTCGAACAGATGGTCAAACCTATGCTCATGTCAATCACG
TCCTGAAAGACACTGCTCGTAAAATTGGAGTAAGTTTATGGAACTTGGGCTGGATACTCTATTTAGTGACTACTGGCGAT
TACATTGCAGATCAGCCCCCAAATTCGGACCTGTCCCATGCAGATGAATTGGACGGCGCATTCAAGAGAATCGCACCGGG
GGTTCGACACCGGACTGAAACGAAACGTCAGATTGAAGTTGCTCGGACTGTAGAAGCTATTTCACTTGAGGATGGGTGCG
ATATTGACGACTTAATCCGGCGACTGGCAGAAGAACAAGGGTACTGTTGCGCGATTACAGGTATTCCTTCGAACCGGAAG
GACACAATTCTCCTTCACCTGAGCGAATTGATAGCAGCGATCGTGAATATGGCGACGGAGGGATTCAGATAG

Upstream 100 bases:

>100_bases
TGTATTAGAGAGATAGAAATGTGGAAGTATAAATTAATTTTCGGCAGTCAATCCTGAAGCCTACAGCTCTGGAAATTCCG
AACGGCCCGAAAAAGGCGAG

Downstream 100 bases:

>100_bases
TTAGTCAATGGGTGAACTTCGCCAAAGGCAGCAAACCCGATGACGTATTCCGCTCTTTGATGCGGCAAGCTGCTAAATAC
ATGGATGAGCGCACCCCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNEYEDEFVNTRGPTFKDFENVTAEQYRTFLLFNANKHWINLSRRGNAAAEDMDTLRHVPKTLASDAPLANRFDAASGAV
EGVGRGIASALLVVMQTEDCGVWNGTSEDGLKRLHLWPGAGRTDGQTYAHVNHVLKDTARKIGVSLWNLGWILYLVTTGD
YIADQPPNSDLSHADELDGAFKRIAPGVRHRTETKRQIEVARTVEAISLEDGCDIDDLIRRLAEEQGYCCAITGIPSNRK
DTILLHLSELIAAIVNMATEGFR

Sequences:

>Translated_263_residues
MNEYEDEFVNTRGPTFKDFENVTAEQYRTFLLFNANKHWINLSRRGNAAAEDMDTLRHVPKTLASDAPLANRFDAASGAV
EGVGRGIASALLVVMQTEDCGVWNGTSEDGLKRLHLWPGAGRTDGQTYAHVNHVLKDTARKIGVSLWNLGWILYLVTTGD
YIADQPPNSDLSHADELDGAFKRIAPGVRHRTETKRQIEVARTVEAISLEDGCDIDDLIRRLAEEQGYCCAITGIPSNRK
DTILLHLSELIAAIVNMATEGFR
>Mature_263_residues
MNEYEDEFVNTRGPTFKDFENVTAEQYRTFLLFNANKHWINLSRRGNAAAEDMDTLRHVPKTLASDAPLANRFDAASGAV
EGVGRGIASALLVVMQTEDCGVWNGTSEDGLKRLHLWPGAGRTDGQTYAHVNHVLKDTARKIGVSLWNLGWILYLVTTGD
YIADQPPNSDLSHADELDGAFKRIAPGVRHRTETKRQIEVARTVEAISLEDGCDIDDLIRRLAEEQGYCCAITGIPSNRK
DTILLHLSELIAAIVNMATEGFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29139; Mature: 29139

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEYEDEFVNTRGPTFKDFENVTAEQYRTFLLFNANKHWINLSRRGNAAAEDMDTLRHVP
CCCHHHHHHCCCCCCHHHHHHHHHHHHEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHH
KTLASDAPLANRFDAASGAVEGVGRGIASALLVVMQTEDCGVWNGTSEDGLKRLHLWPGA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHEEEEECCCC
GRTDGQTYAHVNHVLKDTARKIGVSLWNLGWILYLVTTGDYIADQPPNSDLSHADELDGA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCHHHHHHHH
FKRIAPGVRHRTETKRQIEVARTVEAISLEDGCDIDDLIRRLAEEQGYCCAITGIPSNRK
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC
DTILLHLSELIAAIVNMATEGFR
CCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNEYEDEFVNTRGPTFKDFENVTAEQYRTFLLFNANKHWINLSRRGNAAAEDMDTLRHVP
CCCHHHHHHCCCCCCHHHHHHHHHHHHEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHH
KTLASDAPLANRFDAASGAVEGVGRGIASALLVVMQTEDCGVWNGTSEDGLKRLHLWPGA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHEEEEECCCC
GRTDGQTYAHVNHVLKDTARKIGVSLWNLGWILYLVTTGDYIADQPPNSDLSHADELDGA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCHHHHHHHH
FKRIAPGVRHRTETKRQIEVARTVEAISLEDGCDIDDLIRRLAEEQGYCCAITGIPSNRK
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC
DTILLHLSELIAAIVNMATEGFR
CCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA