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The map label for this gene is ycjN [H]

Identifier: 89053774

GI number: 89053774

Start: 1243620

End: 1244972

Strand: Direct

Name: ycjN [H]

Synonym: Jann_1283

Alternate gene names: 89053774

Gene position: 1243620-1244972 (Clockwise)

Preceding gene: 89053773

Following gene: 89053775

Centisome position: 28.8

GC content: 58.46

Gene sequence:

>1353_bases
ATGAAACTCAAGACAAAATCACTCATGCGGACCGGCGTGGCGATGGCGTTGATCCTGTCGGCTGCCTCAGCTCAGGCAGA
GGATCTGCGGTTCTGGACCACTGAAGAGCAGCCCGAGCGTCTGGCACTTCAGGAAGAGATGGCCGCTGCCTTCGCCGCCG
CCTCGGGTCATACGGTCCAGGTTATTCCGGTAACGGAAACCGATTTGGGCACACGGGCCACTGCTGCATATGCGGCCGGA
GATTTGCCGGACATCATTTATCATCCGCTGCAATATGCCGGTCCATGGGCGGATGCTGGTATCCTGGATATTGATGCCGC
GACCGATGTGATCGAAGTACTGGGGGCGGGAACGTTCGCATCAGGTGCGCTGGACATGGCGGCTGTCGACGGTGGCTATG
CGTCCGTTCCGGTGGATGGCTGGACACAGATGATCGTCTATCGCGCCGATCTTTTCGAGGATGCGGGCCTTGAGCCGCCA
AATTCTTACGCAAATGTGCTGGCTGCAGTAGAGGCGCTTCATAACCCGCCAGAGATGTACGGTTTTGTCGCGGCGACCAA
GATTGACGAGAACTTCATGAGCCAGGTTCTGGAACATGTCTTCCTCGCCAATGGCGTATCTCCTGTCGGACCTGATGGCG
TGCAGGAACTGGACGAAGCCGCCACCATCGAGGTGTTGGAATTCTACCGCGCCATCGCAGAAGCATCACCACCTGGCGAT
CTTTATTGGGACCAGTCGCGCACGCTTTATTTCAGCGGCAACGCGGCGATGATCATCTGGTCGCCGTTCATCCTGGACGA
GCTTGCAGGCCTCCGCGACAGTGCCCCGCCCACCATCAATGATGACCCGACCTCCAGCGATCTTGCAGCGGCAACCGGTA
TTGTGACGAACTTTTCCGGCCCTTCCAATCCGGACGGCGCTGCGTGGGGAGATGTCCGGTATTTCGGCATCACCACTGAT
GCGGCCACGGACGCAGCGATGGAGTTTGTGACGTATTCGATGAACGAGGGATATGGCGCCACCCTGGCGATTGCGCCTGA
AGGAAAATTCCCCGTCCGTCGCGGCACAGAAGAGAACCCGACCGAGTTCACGGATCTTTGGGCCACGCTTGATGTCGGCG
TCGATCGACGCGCGCCTCTGGGTGACCTTTATGAACAATCGATGATCGACGAAATTGTCGGTGGTCTGGATGTGGCACAG
CGTTGGGGTGTTGCGGAGGGTCAGTTGACCCTTGCGTCCACGATCATCAACTCGCAAGTCATTAATCGTCTGGTGCGCGA
GTACCTTGATGGTGAGCGAGATGCGCCTGCGACGGTTGCGGCCCTGAACGAGGCCATCGCGGCGGTTGAATAA

Upstream 100 bases:

>100_bases
GGAGACTAGTTCCCGCCACCTTTGTGGAACGCGCGTCCACGGGACCAGCCAAGGCATGAAAGCAACTGGTTTAAAAATGA
CTTCAATGGGAGGAAGATAA

Downstream 100 bases:

>100_bases
TCTAACATCCGGTGGAGCGCTTATGTCTGCGCGCTCCACCACCCCAAATCTTTCATTCGCACTAATGTTCGGGAGCTCTG
AAAGCTATGGCGGACGTTCA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MKLKTKSLMRTGVAMALILSAASAQAEDLRFWTTEEQPERLALQEEMAAAFAAASGHTVQVIPVTETDLGTRATAAYAAG
DLPDIIYHPLQYAGPWADAGILDIDAATDVIEVLGAGTFASGALDMAAVDGGYASVPVDGWTQMIVYRADLFEDAGLEPP
NSYANVLAAVEALHNPPEMYGFVAATKIDENFMSQVLEHVFLANGVSPVGPDGVQELDEAATIEVLEFYRAIAEASPPGD
LYWDQSRTLYFSGNAAMIIWSPFILDELAGLRDSAPPTINDDPTSSDLAAATGIVTNFSGPSNPDGAAWGDVRYFGITTD
AATDAAMEFVTYSMNEGYGATLAIAPEGKFPVRRGTEENPTEFTDLWATLDVGVDRRAPLGDLYEQSMIDEIVGGLDVAQ
RWGVAEGQLTLASTIINSQVINRLVREYLDGERDAPATVAALNEAIAAVE

Sequences:

>Translated_450_residues
MKLKTKSLMRTGVAMALILSAASAQAEDLRFWTTEEQPERLALQEEMAAAFAAASGHTVQVIPVTETDLGTRATAAYAAG
DLPDIIYHPLQYAGPWADAGILDIDAATDVIEVLGAGTFASGALDMAAVDGGYASVPVDGWTQMIVYRADLFEDAGLEPP
NSYANVLAAVEALHNPPEMYGFVAATKIDENFMSQVLEHVFLANGVSPVGPDGVQELDEAATIEVLEFYRAIAEASPPGD
LYWDQSRTLYFSGNAAMIIWSPFILDELAGLRDSAPPTINDDPTSSDLAAATGIVTNFSGPSNPDGAAWGDVRYFGITTD
AATDAAMEFVTYSMNEGYGATLAIAPEGKFPVRRGTEENPTEFTDLWATLDVGVDRRAPLGDLYEQSMIDEIVGGLDVAQ
RWGVAEGQLTLASTIINSQVINRLVREYLDGERDAPATVAALNEAIAAVE
>Mature_450_residues
MKLKTKSLMRTGVAMALILSAASAQAEDLRFWTTEEQPERLALQEEMAAAFAAASGHTVQVIPVTETDLGTRATAAYAAG
DLPDIIYHPLQYAGPWADAGILDIDAATDVIEVLGAGTFASGALDMAAVDGGYASVPVDGWTQMIVYRADLFEDAGLEPP
NSYANVLAAVEALHNPPEMYGFVAATKIDENFMSQVLEHVFLANGVSPVGPDGVQELDEAATIEVLEFYRAIAEASPPGD
LYWDQSRTLYFSGNAAMIIWSPFILDELAGLRDSAPPTINDDPTSSDLAAATGIVTNFSGPSNPDGAAWGDVRYFGITTD
AATDAAMEFVTYSMNEGYGATLAIAPEGKFPVRRGTEENPTEFTDLWATLDVGVDRRAPLGDLYEQSMIDEIVGGLDVAQ
RWGVAEGQLTLASTIINSQVINRLVREYLDGERDAPATVAALNEAIAAVE

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787569, Length=451, Percent_Identity=23.9467849223947, Blast_Score=106, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47901; Mature: 47901

Theoretical pI: Translated: 3.80; Mature: 3.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKTKSLMRTGVAMALILSAASAQAEDLRFWTTEEQPERLALQEEMAAAFAAASGHTVQ
CCCCHHHHHHHHHHHHHHHHHHCCCHHHCEEECCCCCHHHHHHHHHHHHHHHHCCCCEEE
VIPVTETDLGTRATAAYAAGDLPDIIYHPLQYAGPWADAGILDIDAATDVIEVLGAGTFA
EEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHCCCCCC
SGALDMAAVDGGYASVPVDGWTQMIVYRADLFEDAGLEPPNSYANVLAAVEALHNPPEMY
CCCCCCEEECCCCEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHH
GFVAATKIDENFMSQVLEHVFLANGVSPVGPDGVQELDEAATIEVLEFYRAIAEASPPGD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LYWDQSRTLYFSGNAAMIIWSPFILDELAGLRDSAPPTINDDPTSSDLAAATGIVTNFSG
EEECCCCEEEEECCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHEEECCC
PSNPDGAAWGDVRYFGITTDAATDAAMEFVTYSMNEGYGATLAIAPEGKFPVRRGTEENP
CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHEECCCCCCEEEEECCCCCCCCCCCCCCCC
TEFTDLWATLDVGVDRRAPLGDLYEQSMIDEIVGGLDVAQRWGVAEGQLTLASTIINSQV
CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
INRLVREYLDGERDAPATVAALNEAIAAVE
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLKTKSLMRTGVAMALILSAASAQAEDLRFWTTEEQPERLALQEEMAAAFAAASGHTVQ
CCCCHHHHHHHHHHHHHHHHHHCCCHHHCEEECCCCCHHHHHHHHHHHHHHHHCCCCEEE
VIPVTETDLGTRATAAYAAGDLPDIIYHPLQYAGPWADAGILDIDAATDVIEVLGAGTFA
EEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHCCCCCC
SGALDMAAVDGGYASVPVDGWTQMIVYRADLFEDAGLEPPNSYANVLAAVEALHNPPEMY
CCCCCCEEECCCCEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHH
GFVAATKIDENFMSQVLEHVFLANGVSPVGPDGVQELDEAATIEVLEFYRAIAEASPPGD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LYWDQSRTLYFSGNAAMIIWSPFILDELAGLRDSAPPTINDDPTSSDLAAATGIVTNFSG
EEECCCCEEEEECCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHEEECCC
PSNPDGAAWGDVRYFGITTDAATDAAMEFVTYSMNEGYGATLAIAPEGKFPVRRGTEENP
CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHEECCCCCCEEEEECCCCCCCCCCCCCCCC
TEFTDLWATLDVGVDRRAPLGDLYEQSMIDEIVGGLDVAQRWGVAEGQLTLASTIINSQV
CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
INRLVREYLDGERDAPATVAALNEAIAAVE
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]