Click here to switch to the map view.

The map label for this gene is 89053746

Identifier: 89053746

GI number: 89053746

Start: 1209776

End: 1211272

Strand: Direct

Name: 89053746

Synonym: Jann_1255

Alternate gene names: NA

Gene position: 1209776-1211272 (Clockwise)

Preceding gene: 89053745

Following gene: 89053747

Centisome position: 28.02

GC content: 67.94

Gene sequence:

>1497_bases
ATGTTTGCCAAGTATTTGACGACATCATCCCTGGTTGCGGCCATCGCCCTGACCCCCCTTGCATCCGCCCCGGCCCAAGC
CCAGGACGCCCGGGACGTGATCGGCGGTCTGCTTTTGGGTGGCGCAATTGGTGCGGCCATCGTCGGCAGCCAGCAGCCCC
GCACCCGCGTGATCGTGCCACAGCAACCGGCTCCGCCCCGCGTGCAGCCCGGCCCGCCTCCGCCCCGTGTTCAGCCGTCT
CGCCCCCAGCAGCCGCGCGTTGTGCGCCCCTCCATCCCGGCGACGGAAGCCGGGCGGCAGGTCCAGACGGCCCTGAACTA
TTTCGGCTTTGATGCGGGGTTCGTCGACGGTCAGGTTGGTCCGTCCACCCGCGCCGCGGTCGAGCGCTATCAGGCGTTCC
AGAACTATCCCGTCAACGGCCGTTCGTTCCCCGAGAACCAGGCGTTGCACCTGATCAATGCCTACCAATGGGCCAATAAT
GGCGGCGCTGCCCAGACCGGACTTCAGCGTCAGGCGTTGCTGTCGGCCTACCAGCAGCACCTTGCCGGTACGCTCAACCC
CGTCACGCCCCAGCCCTCGGTCGCCCCGACGCCGAACAACACCACGGTCATCGTGAACCCGGCCACGACCACGGTCGTGC
CTGCACCGGGCACAACGCCGGTCACCACCGTGGCCGCCACATCGGGCGCGCCGGTTCCCAACCTGTTCTCGGGCGCCGCC
GCAACCCCCGCGCTGTCGTCGCGCTGTGACGCGGTCGCGTTGCAGGGTCAGGCCAATGGCGGGATGATGACGCTGGGCAA
CCTGTCCAACCCCAGCTTCGCCTTGTCCGAGCAGTTCTGCACGGCACGCGCCAGCGCAGTGAACCAGGGCCACGATCTGA
CCCAGGCGATTGCCGGGCTCAGCTACGCCGACATCACCGTGCAATGTGAAGGCTTCTCCACCGCCGTGGCCGGACAAACC
GCGCAATTGGGCGCGCTGACACCGCAGCAGGCCATGGGGTCCGCCCAGGGATTCGCCTACACCACGGGCATTCCACAGGC
AGAGATGGCCGCGACGGCCCGCGTCTGCCTTGGTATCGGATATGGTGCGGACAACATGGATATGGCGATGGGCTCGGCCC
TGATGCTGGTGGCGTCCGGCGAGCCTGCCTATGGTGAGCTGATCGGTCACCACCTGCGCGAAGGTTTCGGCGTCTCGGCC
GATGATGGCAAGGCGCAGGCGTGGTTCAACATGTCCCTGTCGGCCGTTGAGGCAGGCGCGCCCGCGGTCTTTAGCCCTAC
CGATGCAGGCCGCTTGCCCCTGATCCGTCAGGCCGTGGCGATGTCGCTGGGTGGCCAGCCCGCCCCGGTGCCCGCCTCCA
CCGTGGTACGCGTGCCGACGCTGAACATCGCGCCGACACAGGTTCCCGCCTCCAACCGCGCCCCGGCGCCCGGTGCAGAT
GGCGAGATCGTCTTCGCGCCGCAAAGCGTGCTGCCGACCTTCGAGGTCAACCAGTAA

Upstream 100 bases:

>100_bases
ATTTCACGGGTAGGGGATTCCTGCCTAAGAGAATCAGCAAAACTTCTGCTAACGTCATCCTCAGATAAATGTACCTGTCT
TGTCTGCGGAGAAATTATTC

Downstream 100 bases:

>100_bases
GCACCGGCGTAGAATTGTCTCATGCGGCGGGTCCCAACAGGGCCCGCCGTTTTCCGTTCCGGTGCAGATGAAAGGGTCTG
TGGGGGGCGACGCGAAAAAA

Product: peptidoglycan binding domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MFAKYLTTSSLVAAIALTPLASAPAQAQDARDVIGGLLLGGAIGAAIVGSQQPRTRVIVPQQPAPPRVQPGPPPPRVQPS
RPQQPRVVRPSIPATEAGRQVQTALNYFGFDAGFVDGQVGPSTRAAVERYQAFQNYPVNGRSFPENQALHLINAYQWANN
GGAAQTGLQRQALLSAYQQHLAGTLNPVTPQPSVAPTPNNTTVIVNPATTTVVPAPGTTPVTTVAATSGAPVPNLFSGAA
ATPALSSRCDAVALQGQANGGMMTLGNLSNPSFALSEQFCTARASAVNQGHDLTQAIAGLSYADITVQCEGFSTAVAGQT
AQLGALTPQQAMGSAQGFAYTTGIPQAEMAATARVCLGIGYGADNMDMAMGSALMLVASGEPAYGELIGHHLREGFGVSA
DDGKAQAWFNMSLSAVEAGAPAVFSPTDAGRLPLIRQAVAMSLGGQPAPVPASTVVRVPTLNIAPTQVPASNRAPAPGAD
GEIVFAPQSVLPTFEVNQ

Sequences:

>Translated_498_residues
MFAKYLTTSSLVAAIALTPLASAPAQAQDARDVIGGLLLGGAIGAAIVGSQQPRTRVIVPQQPAPPRVQPGPPPPRVQPS
RPQQPRVVRPSIPATEAGRQVQTALNYFGFDAGFVDGQVGPSTRAAVERYQAFQNYPVNGRSFPENQALHLINAYQWANN
GGAAQTGLQRQALLSAYQQHLAGTLNPVTPQPSVAPTPNNTTVIVNPATTTVVPAPGTTPVTTVAATSGAPVPNLFSGAA
ATPALSSRCDAVALQGQANGGMMTLGNLSNPSFALSEQFCTARASAVNQGHDLTQAIAGLSYADITVQCEGFSTAVAGQT
AQLGALTPQQAMGSAQGFAYTTGIPQAEMAATARVCLGIGYGADNMDMAMGSALMLVASGEPAYGELIGHHLREGFGVSA
DDGKAQAWFNMSLSAVEAGAPAVFSPTDAGRLPLIRQAVAMSLGGQPAPVPASTVVRVPTLNIAPTQVPASNRAPAPGAD
GEIVFAPQSVLPTFEVNQ
>Mature_498_residues
MFAKYLTTSSLVAAIALTPLASAPAQAQDARDVIGGLLLGGAIGAAIVGSQQPRTRVIVPQQPAPPRVQPGPPPPRVQPS
RPQQPRVVRPSIPATEAGRQVQTALNYFGFDAGFVDGQVGPSTRAAVERYQAFQNYPVNGRSFPENQALHLINAYQWANN
GGAAQTGLQRQALLSAYQQHLAGTLNPVTPQPSVAPTPNNTTVIVNPATTTVVPAPGTTPVTTVAATSGAPVPNLFSGAA
ATPALSSRCDAVALQGQANGGMMTLGNLSNPSFALSEQFCTARASAVNQGHDLTQAIAGLSYADITVQCEGFSTAVAGQT
AQLGALTPQQAMGSAQGFAYTTGIPQAEMAATARVCLGIGYGADNMDMAMGSALMLVASGEPAYGELIGHHLREGFGVSA
DDGKAQAWFNMSLSAVEAGAPAVFSPTDAGRLPLIRQAVAMSLGGQPAPVPASTVVRVPTLNIAPTQVPASNRAPAPGAD
GEIVFAPQSVLPTFEVNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50865; Mature: 50865

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAKYLTTSSLVAAIALTPLASAPAQAQDARDVIGGLLLGGAIGAAIVGSQQPRTRVIVP
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
QQPAPPRVQPGPPPPRVQPSRPQQPRVVRPSIPATEAGRQVQTALNYFGFDAGFVDGQVG
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PSTRAAVERYQAFQNYPVNGRSFPENQALHLINAYQWANNGGAAQTGLQRQALLSAYQQH
CHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
LAGTLNPVTPQPSVAPTPNNTTVIVNPATTTVVPAPGTTPVTTVAATSGAPVPNLFSGAA
HCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCEEEEEECCCCCCCCHHCCCC
ATPALSSRCDAVALQGQANGGMMTLGNLSNPSFALSEQFCTARASAVNQGHDLTQAIAGL
CCCHHHCCCCEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCC
SYADITVQCEGFSTAVAGQTAQLGALTPQQAMGSAQGFAYTTGIPQAEMAATARVCLGIG
CEEEEEEEECCCCEECCCCCHHHCCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHEEEC
YGADNMDMAMGSALMLVASGEPAYGELIGHHLREGFGVSADDGKAQAWFNMSLSAVEAGA
CCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHCCC
PAVFSPTDAGRLPLIRQAVAMSLGGQPAPVPASTVVRVPTLNIAPTQVPASNRAPAPGAD
CCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
GEIVFAPQSVLPTFEVNQ
CEEEECCHHHCCCEECCC
>Mature Secondary Structure
MFAKYLTTSSLVAAIALTPLASAPAQAQDARDVIGGLLLGGAIGAAIVGSQQPRTRVIVP
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
QQPAPPRVQPGPPPPRVQPSRPQQPRVVRPSIPATEAGRQVQTALNYFGFDAGFVDGQVG
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PSTRAAVERYQAFQNYPVNGRSFPENQALHLINAYQWANNGGAAQTGLQRQALLSAYQQH
CHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
LAGTLNPVTPQPSVAPTPNNTTVIVNPATTTVVPAPGTTPVTTVAATSGAPVPNLFSGAA
HCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCEEEEEECCCCCCCCHHCCCC
ATPALSSRCDAVALQGQANGGMMTLGNLSNPSFALSEQFCTARASAVNQGHDLTQAIAGL
CCCHHHCCCCEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCC
SYADITVQCEGFSTAVAGQTAQLGALTPQQAMGSAQGFAYTTGIPQAEMAATARVCLGIG
CEEEEEEEECCCCEECCCCCHHHCCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHEEEC
YGADNMDMAMGSALMLVASGEPAYGELIGHHLREGFGVSADDGKAQAWFNMSLSAVEAGA
CCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHCCC
PAVFSPTDAGRLPLIRQAVAMSLGGQPAPVPASTVVRVPTLNIAPTQVPASNRAPAPGAD
CCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
GEIVFAPQSVLPTFEVNQ
CEEEECCHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA