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The map label for this gene is 89053723

Identifier: 89053723

GI number: 89053723

Start: 1188430

End: 1188810

Strand: Direct

Name: 89053723

Synonym: Jann_1232

Alternate gene names: NA

Gene position: 1188430-1188810 (Clockwise)

Preceding gene: 89053721

Following gene: 89053724

Centisome position: 27.52

GC content: 60.89

Gene sequence:

>381_bases
ATGACACATCCCGTAGACGTTCACGTGGGAAAACGCATCCGCCATCGCCGGTGGATGGTGGGTCGGACACAACAGCAACT
GGCCGAGACCGTCGGTATCAAATTCCAGCAGATTCAGAAGTACGAGACCGGGATGAATCGCGTCTCGGCCTCGCGTCTGT
GGGATATTGGCGAAGCGCTGGACGTGCCTGTCGCCTATTTCTTTGAAGGCGTGGGCAGTGAGGAAGTGGCCTCCGATACA
GCCACGGGTGAGGCGTTGCCGGGCGACCTTCTGGCAGATCGTGAGGCGTTGGAGCTTGTCCGGTCCTACTACGCGATCCC
GGAAAATCAGCGCCGTCGCCTGTTCGATCTGGCCCGCGTGCTGTCGGATGCCGCCGCCTGA

Upstream 100 bases:

>100_bases
ACCCTTACGGTCAAGACAGCGGAGAGGTCGTCAGACAGCCTCACCGGGAAGACGGCTTCGAACCAAGCAGCGACCATCGC
CCTTTTCAGGGGAGACGCCC

Downstream 100 bases:

>100_bases
CCCCTGACGCCGGAACCTTGACGTCTGCACGCGCAACATGTCACCCCCGGATCTTGTTTGGATATGGGGGCCACCATGAA
AGATGAGCAGGCATTGATTG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MTHPVDVHVGKRIRHRRWMVGRTQQQLAETVGIKFQQIQKYETGMNRVSASRLWDIGEALDVPVAYFFEGVGSEEVASDT
ATGEALPGDLLADREALELVRSYYAIPENQRRRLFDLARVLSDAAA

Sequences:

>Translated_126_residues
MTHPVDVHVGKRIRHRRWMVGRTQQQLAETVGIKFQQIQKYETGMNRVSASRLWDIGEALDVPVAYFFEGVGSEEVASDT
ATGEALPGDLLADREALELVRSYYAIPENQRRRLFDLARVLSDAAA
>Mature_125_residues
THPVDVHVGKRIRHRRWMVGRTQQQLAETVGIKFQQIQKYETGMNRVSASRLWDIGEALDVPVAYFFEGVGSEEVASDTA
TGEALPGDLLADREALELVRSYYAIPENQRRRLFDLARVLSDAAA

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 14215; Mature: 14084

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHPVDVHVGKRIRHRRWMVGRTQQQLAETVGIKFQQIQKYETGMNRVSASRLWDIGEAL
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVPVAYFFEGVGSEEVASDTATGEALPGDLLADREALELVRSYYAIPENQRRRLFDLARV
CCHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LSDAAA
HHHCCC
>Mature Secondary Structure 
THPVDVHVGKRIRHRRWMVGRTQQQLAETVGIKFQQIQKYETGMNRVSASRLWDIGEAL
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVPVAYFFEGVGSEEVASDTATGEALPGDLLADREALELVRSYYAIPENQRRRLFDLARV
CCHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LSDAAA
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]