| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is tatC [C]
Identifier: 89053702
GI number: 89053702
Start: 1170724
End: 1171623
Strand: Direct
Name: tatC [C]
Synonym: Jann_1211
Alternate gene names: 89053702
Gene position: 1170724-1171623 (Clockwise)
Preceding gene: 89053701
Following gene: 89053703
Centisome position: 27.11
GC content: 58.44
Gene sequence:
>900_bases ATGACCCAGACAGACGCGCAAACCGAAGCAGATGCCGATCAGATCGAAGATGAGCTGGAGGGCAGCGCCGCCCCCCTGGT GGAACATCTGGCTGAATTGCGCACCCGTCTGATCCGGTCTGTTCTGGCCTTCGTGGTGGGCATCATCGTGATGTTCACGG TGGCCGAGCCGATCCTGAATTTCGTGTCGCAGCCGCTGGCGGACGTGCTCCGCAACCGGGGCGAGGATGCCCGCTTGATC TTCACCGCGCCGCAAGAGAAGTTCTTCGTGTTGATCCGCATCTCCATCATAATGGGGTTCGCGGTGTCCTTCCCGGTGAT TGCGCACCAACTTTGGCGGTTCGTGGCCCCGGGTCTTTATAAATCCGAGAAGGGGGCGATCCTGCCGTTTCTTGTCGCCT CTCCGGTATTGTTCACGATTGGCGCGGCCTTCGCCCATTATGTCGTGACGCCGCTGGCGATGAATTTCTTCATCGGATTT TCCGACGCGATCCCTGCGCTTGCGAATTTGATCGCGGGCGATGGTACATTTGAGAACCCGGAGACCGATGGAGAATTGCA GACGATCTTCCTTGGCTCGGTCAAGGAATCGCTTGATCTGGCGCTGAAGTTCATCTTCGCCTTTGGGCTTTGCTTTCAGT TGCCCGTATTGCTGACGTTGATGGGCAAGGCCGGGCTGGTGTCGTCGCAGGGCTTGGCGGATGTGCGCAAATGGGCCGTC GTGGGGATCTTGACGCTGGCCGCGCTGGTGACACCGCCGGACGTGATCACCCAGGTGATCCTGTTTACGGTTGTTTATGG ACTTTATGAGATCTCTATCCAACTCGTACGTTGGGTCGAGCATTCCCGAAACCGCCGCCTGCGCGCGGAGGGGATCCTCG ACGAAGGAGAGGAACTGTAA
Upstream 100 bases:
>100_bases CCGATGAAGAGGCTGTCGCAGCAGCCGAGCCTGCCGCCGTGGACCCTGGCCCCGCAGACATTGAAGCGGCAGATACCGCC GAGCCGCAGGCAAACCGACC
Downstream 100 bases:
>100_bases AACGTGTCCCATAAGACCTGCGCGCCCGATCAGGCGTTGACCCGGATCGCAGATGCGTTGGAGCGTTTGCGTCCCAGGCC CGCTGCGGCTCCTGATATGG
Product: Sec-independent protein translocase TatC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTQTDAQTEADADQIEDELEGSAAPLVEHLAELRTRLIRSVLAFVVGIIVMFTVAEPILNFVSQPLADVLRNRGEDARLI FTAPQEKFFVLIRISIIMGFAVSFPVIAHQLWRFVAPGLYKSEKGAILPFLVASPVLFTIGAAFAHYVVTPLAMNFFIGF SDAIPALANLIAGDGTFENPETDGELQTIFLGSVKESLDLALKFIFAFGLCFQLPVLLTLMGKAGLVSSQGLADVRKWAV VGILTLAALVTPPDVITQVILFTVVYGLYEISIQLVRWVEHSRNRRLRAEGILDEGEEL
Sequences:
>Translated_299_residues MTQTDAQTEADADQIEDELEGSAAPLVEHLAELRTRLIRSVLAFVVGIIVMFTVAEPILNFVSQPLADVLRNRGEDARLI FTAPQEKFFVLIRISIIMGFAVSFPVIAHQLWRFVAPGLYKSEKGAILPFLVASPVLFTIGAAFAHYVVTPLAMNFFIGF SDAIPALANLIAGDGTFENPETDGELQTIFLGSVKESLDLALKFIFAFGLCFQLPVLLTLMGKAGLVSSQGLADVRKWAV VGILTLAALVTPPDVITQVILFTVVYGLYEISIQLVRWVEHSRNRRLRAEGILDEGEEL >Mature_298_residues TQTDAQTEADADQIEDELEGSAAPLVEHLAELRTRLIRSVLAFVVGIIVMFTVAEPILNFVSQPLADVLRNRGEDARLIF TAPQEKFFVLIRISIIMGFAVSFPVIAHQLWRFVAPGLYKSEKGAILPFLVASPVLFTIGAAFAHYVVTPLAMNFFIGFS DAIPALANLIAGDGTFENPETDGELQTIFLGSVKESLDLALKFIFAFGLCFQLPVLLTLMGKAGLVSSQGLADVRKWAVV GILTLAALVTPPDVITQVILFTVVYGLYEISIQLVRWVEHSRNRRLRAEGILDEGEEL
Specific function: Required For Correct Localization Of Precursor Proteins Bearing Signal Peptides With The Twin Arginine Conserved Motif S/T-R-R-X-F-L-K. This Sec-Independent Pathway Is Termed Tat For Twin-Arginine Translocation System. This System Mainly Transports Protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=263, Percent_Identity=34.2205323193916, Blast_Score=141, Evalue=5e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 32761; Mature: 32630
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTDAQTEADADQIEDELEGSAAPLVEHLAELRTRLIRSVLAFVVGIIVMFTVAEPILN CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVSQPLADVLRNRGEDARLIFTAPQEKFFVLIRISIIMGFAVSFPVIAHQLWRFVAPGLY HHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KSEKGAILPFLVASPVLFTIGAAFAHYVVTPLAMNFFIGFSDAIPALANLIAGDGTFENP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCC ETDGELQTIFLGSVKESLDLALKFIFAFGLCFQLPVLLTLMGKAGLVSSQGLADVRKWAV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH VGILTLAALVTPPDVITQVILFTVVYGLYEISIQLVRWVEHSRNRRLRAEGILDEGEEL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC >Mature Secondary Structure TQTDAQTEADADQIEDELEGSAAPLVEHLAELRTRLIRSVLAFVVGIIVMFTVAEPILN CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVSQPLADVLRNRGEDARLIFTAPQEKFFVLIRISIIMGFAVSFPVIAHQLWRFVAPGLY HHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KSEKGAILPFLVASPVLFTIGAAFAHYVVTPLAMNFFIGFSDAIPALANLIAGDGTFENP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCC ETDGELQTIFLGSVKESLDLALKFIFAFGLCFQLPVLLTLMGKAGLVSSQGLADVRKWAV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH VGILTLAALVTPPDVITQVILFTVVYGLYEISIQLVRWVEHSRNRRLRAEGILDEGEEL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]