Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is tatB [H]

Identifier: 89053701

GI number: 89053701

Start: 1170206

End: 1170727

Strand: Direct

Name: tatB [H]

Synonym: Jann_1210

Alternate gene names: 89053701

Gene position: 1170206-1170727 (Clockwise)

Preceding gene: 89053700

Following gene: 89053702

Centisome position: 27.1

GC content: 62.84

Gene sequence:

>522_bases
ATGCCTGATATTGGCGGTATGGAACTATTGGTCATTGGGATCGTGGCGTTGATCGTCGTGGGCCCAAAAGATTTGCCTGG
CATGTTCAAGAAGCTGGGGCAGATGGTGGCCCGCGTGCGCGCCATGGGGCGGGAGTTCACCAATGCGATGAACGCAGCCG
CAGACGACACGGGCATGTCGGAGATGAACCGCGATCTGCGCGCGGCCACGAAGTTCACCAACCCCAAGGCCATGGCGAAA
GAGATGATGGGCGATGTCATGGACGACATTGATCCGTCGAAATATGAGGAAGGCTCGGCCACCCGCGTCGTGGCCGAGAA
GAAGGCCGCCGCCCAAAAGGACGCGCGAGAAATGGCCGCGAAGGCCCGTGAGATCCGCGCGGCAAAGGCCGCTGAGGCCG
CCGAGTTGAGCGGAGAGCCCGATGAAGAGGCTGTCGCAGCAGCCGAGCCTGCCGCCGTGGACCCTGGCCCCGCAGACATT
GAAGCGGCAGATACCGCCGAGCCGCAGGCAAACCGACCATGA

Upstream 100 bases:

>100_bases
GACGCCCGAAGAGCGGACCACACCGATCACCGAGCGCGACAACGCCTGATCCCGCTTGAGACGACGACGCTCAAGACGGC
GGCAAAAGGGTTAGCGGCGT

Downstream 100 bases:

>100_bases
CCCAGACAGACGCGCAAACCGAAGCAGATGCCGATCAGATCGAAGATGAGCTGGAGGGCAGCGCCGCCCCCCTGGTGGAA
CATCTGGCTGAATTGCGCAC

Product: twin-arginine translocation protein TatB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MPDIGGMELLVIGIVALIVVGPKDLPGMFKKLGQMVARVRAMGREFTNAMNAAADDTGMSEMNRDLRAATKFTNPKAMAK
EMMGDVMDDIDPSKYEEGSATRVVAEKKAAAQKDAREMAAKAREIRAAKAAEAAELSGEPDEEAVAAAEPAAVDPGPADI
EAADTAEPQANRP

Sequences:

>Translated_173_residues
MPDIGGMELLVIGIVALIVVGPKDLPGMFKKLGQMVARVRAMGREFTNAMNAAADDTGMSEMNRDLRAATKFTNPKAMAK
EMMGDVMDDIDPSKYEEGSATRVVAEKKAAAQKDAREMAAKAREIRAAKAAEAAELSGEPDEEAVAAAEPAAVDPGPADI
EAADTAEPQANRP
>Mature_172_residues
PDIGGMELLVIGIVALIVVGPKDLPGMFKKLGQMVARVRAMGREFTNAMNAAADDTGMSEMNRDLRAATKFTNPKAMAKE
MMGDVMDDIDPSKYEEGSATRVVAEKKAAAQKDAREMAAKAREIRAAKAAEAAELSGEPDEEAVAAAEPAAVDPGPADIE
AADTAEPQANRP

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei

COG id: COG1826

COG function: function code U; Sec-independent protein secretion pathway components

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003369
- InterPro:   IPR018448
- InterPro:   IPR003998 [H]

Pfam domain/function: PF02416 MttA_Hcf106 [H]

EC number: NA

Molecular weight: Translated: 18202; Mature: 18071

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDIGGMELLVIGIVALIVVGPKDLPGMFKKLGQMVARVRAMGREFTNAMNAAADDTGMS
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EMNRDLRAATKFTNPKAMAKEMMGDVMDDIDPSKYEEGSATRVVAEKKAAAQKDAREMAA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KAREIRAAKAAEAAELSGEPDEEAVAAAEPAAVDPGPADIEAADTAEPQANRP
HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PDIGGMELLVIGIVALIVVGPKDLPGMFKKLGQMVARVRAMGREFTNAMNAAADDTGMS
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EMNRDLRAATKFTNPKAMAKEMMGDVMDDIDPSKYEEGSATRVVAEKKAAAQKDAREMAA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KAREIRAAKAAEAAELSGEPDEEAVAAAEPAAVDPGPADIEAADTAEPQANRP
HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA