| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is tatB [H]
Identifier: 89053701
GI number: 89053701
Start: 1170206
End: 1170727
Strand: Direct
Name: tatB [H]
Synonym: Jann_1210
Alternate gene names: 89053701
Gene position: 1170206-1170727 (Clockwise)
Preceding gene: 89053700
Following gene: 89053702
Centisome position: 27.1
GC content: 62.84
Gene sequence:
>522_bases ATGCCTGATATTGGCGGTATGGAACTATTGGTCATTGGGATCGTGGCGTTGATCGTCGTGGGCCCAAAAGATTTGCCTGG CATGTTCAAGAAGCTGGGGCAGATGGTGGCCCGCGTGCGCGCCATGGGGCGGGAGTTCACCAATGCGATGAACGCAGCCG CAGACGACACGGGCATGTCGGAGATGAACCGCGATCTGCGCGCGGCCACGAAGTTCACCAACCCCAAGGCCATGGCGAAA GAGATGATGGGCGATGTCATGGACGACATTGATCCGTCGAAATATGAGGAAGGCTCGGCCACCCGCGTCGTGGCCGAGAA GAAGGCCGCCGCCCAAAAGGACGCGCGAGAAATGGCCGCGAAGGCCCGTGAGATCCGCGCGGCAAAGGCCGCTGAGGCCG CCGAGTTGAGCGGAGAGCCCGATGAAGAGGCTGTCGCAGCAGCCGAGCCTGCCGCCGTGGACCCTGGCCCCGCAGACATT GAAGCGGCAGATACCGCCGAGCCGCAGGCAAACCGACCATGA
Upstream 100 bases:
>100_bases GACGCCCGAAGAGCGGACCACACCGATCACCGAGCGCGACAACGCCTGATCCCGCTTGAGACGACGACGCTCAAGACGGC GGCAAAAGGGTTAGCGGCGT
Downstream 100 bases:
>100_bases CCCAGACAGACGCGCAAACCGAAGCAGATGCCGATCAGATCGAAGATGAGCTGGAGGGCAGCGCCGCCCCCCTGGTGGAA CATCTGGCTGAATTGCGCAC
Product: twin-arginine translocation protein TatB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MPDIGGMELLVIGIVALIVVGPKDLPGMFKKLGQMVARVRAMGREFTNAMNAAADDTGMSEMNRDLRAATKFTNPKAMAK EMMGDVMDDIDPSKYEEGSATRVVAEKKAAAQKDAREMAAKAREIRAAKAAEAAELSGEPDEEAVAAAEPAAVDPGPADI EAADTAEPQANRP
Sequences:
>Translated_173_residues MPDIGGMELLVIGIVALIVVGPKDLPGMFKKLGQMVARVRAMGREFTNAMNAAADDTGMSEMNRDLRAATKFTNPKAMAK EMMGDVMDDIDPSKYEEGSATRVVAEKKAAAQKDAREMAAKAREIRAAKAAEAAELSGEPDEEAVAAAEPAAVDPGPADI EAADTAEPQANRP >Mature_172_residues PDIGGMELLVIGIVALIVVGPKDLPGMFKKLGQMVARVRAMGREFTNAMNAAADDTGMSEMNRDLRAATKFTNPKAMAKE MMGDVMDDIDPSKYEEGSATRVVAEKKAAAQKDAREMAAKAREIRAAKAAEAAELSGEPDEEAVAAAEPAAVDPGPADIE AADTAEPQANRP
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003369 - InterPro: IPR018448 - InterPro: IPR003998 [H]
Pfam domain/function: PF02416 MttA_Hcf106 [H]
EC number: NA
Molecular weight: Translated: 18202; Mature: 18071
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDIGGMELLVIGIVALIVVGPKDLPGMFKKLGQMVARVRAMGREFTNAMNAAADDTGMS CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH EMNRDLRAATKFTNPKAMAKEMMGDVMDDIDPSKYEEGSATRVVAEKKAAAQKDAREMAA HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KAREIRAAKAAEAAELSGEPDEEAVAAAEPAAVDPGPADIEAADTAEPQANRP HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PDIGGMELLVIGIVALIVVGPKDLPGMFKKLGQMVARVRAMGREFTNAMNAAADDTGMS CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH EMNRDLRAATKFTNPKAMAKEMMGDVMDDIDPSKYEEGSATRVVAEKKAAAQKDAREMAA HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KAREIRAAKAAEAAELSGEPDEEAVAAAEPAAVDPGPADIEAADTAEPQANRP HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA