BacMap

Definition	Jannaschia sp. CCS1 chromosome, complete genome.
Accession	NC_007802
Length	4,317,977

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The map label for this gene is rhlE [H]

Identifier: 89053691

GI number: 89053691

Start: 1160864

End: 1162798

Strand: Reverse

Name: rhlE [H]

Synonym: Jann_1200

Alternate gene names: 89053691

Gene position: 1162798-1160864 (Counterclockwise)

Preceding gene: 89053692

Following gene: 89053659

Centisome position: 26.93

GC content: 64.81

Gene sequence:

>1935_bases
ATGTCGCCCCGGCAAGATTGGACGCCCATGACGACTTTCGCAGACCTCGATCTCAATCCCAAAGTTCAAAAAGCCATCGT
GGAGGCGGGATATGAAAGCCCAACCCCCATCCAGGCCGGCGCAATTCCGCCCGCCCTCGCGGGCCGCGACGTGTTGGGCA
TCGCCCAGACAGGCACCGGCAAGACCGCGTCGTTCACCCTGCCGATGATCACCATGCTGGCCCGTGGCCGCGCCCGCGCG
CGGATGCCGCGGTCCCTCGTCCTGTGCCCCACGCGAGAACTCGCCGCACAAGTGGCAGAGAACTTTGATATTTACGCCAA
GCATGTGAAGTTGACCAAGGCCCTATTGATCGGTGGCGTGTCCTTTAAGGAGCAGGAGCAGGCCATCGACAAAGGCGTCG
ATGTCCTCATCGCCACACCGGGCCGCCTGCTGGACCATTTCGAACGCGGCAAGCTGATCCTGAACGACGTGAAAGTCATG
GTCGTGGACGAGGCCGACCGGATGCTGGACATGGGCTTTATCCCGGATATCGAGCGGATCTTCGGCCTGGTTCCCTTCAC
CCGCCAGACGCTGTTCTTCTCGGCCACCATGGCCCCGGAGATCGAGCGCATCACCAACACATTCCTGTCCAACCCCGAGA
AGATCGAAGTGGAGCGTCAATCCACGACCTCCGCCACGATCGAACAGCGGTTGATCGAATTCAAAGCGCCCCGCCGCGAT
GCGCAGGCCAAGATGAAGCGCGACATGCTGCGCGCCGCGATCACGGCGGAGGGCGATGCCTTCCGCAACGCCATCATCTT
CTGCAACCGCAAGGTGGATGTGGATATCGTTGCCAAGTCGTTGAAAAAGCATAACTTGAATGCTGAGCCGATCCATGGCG
ATCTGGACCAATCGCACCGGATGCGCACGCTTGCAGGCTTCCGCGACGGGTCGATCACCTTGCTTGTGGCCTCTGACGTT
GCGGCCCGCGGCCTCGACATTCCCAACGTGAGCCATGTAATCAACTACGATGTGCCCTCCCACGCAGAGGACTACGTGCA
CCGCATTGGCCGCACGGGTCGCGCGGGCAAAACAGGTGTCGCGATCACGCTGTGCGTCCCCTCCGATGAGAAGTATCTGG
GCGCGATTGAGGGGCTGATCAAACAACCGATCCCGCGCGCGGAGGCGCCGATGGATGCCGGTACGCCGAAGGCGGAGACC
GAGGACAAACCGCGCAGATCGCGCCGTGGGGGTCGCCGGTCCGAAGAGCCCAAGGCCGAGGAAAAGCAGGCCGACGCAGC
GCCGGAGCCTGCGCGGGAAGAGGCGAAGCCAGAACCACAGCGGCAGCAACAGCCACAGCCCCGTCGCGAACGCGGCGACC
GCGGTGAGCGGAATGACCGCGGAGGTCGGGGCCGGGGACGTGACCGGGGCGACCGTGGCCCCCGCATCGTGGGAATGGGG
GACTTCACCCCTGACTTCATCGGCCTGAGCTTTGACGAACGTCGCGGCGGCCCGGCCCGGGAAATGAACCTGGACGAGGA
TGAGCCCGCGACAGAAATCCCTGCAGAAACAACCGTCGAGGCCCCTGCAGAGACCCCAACGCCGACAGAAGAGAAGCCGA
AACGTCGCCGCACGCGCAAGAAGCCCGAGCCTGCGACAGAGGACGCGCCAGCTGAGGCGGCGACCGAAGCGCCCGCTGGA
GACGACGCCCCGACGGAGGCAGCCGCAGACGCACCCGTTCCGGAGGAAAAGCCCAAGCGTCGCCGGGCACCCCGCAAGAA
AGCAGACGCGACGCCAGCTGAGGCCGAGCCGGACGCCCCGGCACCGGACGGCGACGCGGAAGAAAAGCCCAAGCGCCGAC
GCACGCGGAAAAAGAAGGTCGAAGAAGACGCGCCCGAGGCCGCCGATGCGGCTGATCCTGCCGAGGCTACGGCAGACGCG
CCCTCCGCCGACTAA

Upstream 100 bases:

>100_bases
GTCGAGTGAATGGAATAAGTGCTTTGCGTGCCCGCGGTCCGCGCGGACATCTATCGCGGAGCGCGTTGTCAGGAAGCGCT
CCATCACCCCGCCGACGGGC

Downstream 100 bases:

>100_bases
GCCTCCGCAAGACAAAAAAGCGCCGCGCAAGGATCACACCCTGCGCGGCGCTTTTTCGTTTCAGCTCAAATATTTACTCC
GCCATCAGGCGGCTGACCAG

Product: DEAD/DEAH box helicase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 644; Mature: 643

Protein sequence:

>644_residues
MSPRQDWTPMTTFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMITMLARGRARA
RMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQAIDKGVDVLIATPGRLLDHFERGKLILNDVKVM
VVDEADRMLDMGFIPDIERIFGLVPFTRQTLFFSATMAPEIERITNTFLSNPEKIEVERQSTTSATIEQRLIEFKAPRRD
AQAKMKRDMLRAAITAEGDAFRNAIIFCNRKVDVDIVAKSLKKHNLNAEPIHGDLDQSHRMRTLAGFRDGSITLLVASDV
AARGLDIPNVSHVINYDVPSHAEDYVHRIGRTGRAGKTGVAITLCVPSDEKYLGAIEGLIKQPIPRAEAPMDAGTPKAET
EDKPRRSRRGGRRSEEPKAEEKQADAAPEPAREEAKPEPQRQQQPQPRRERGDRGERNDRGGRGRGRDRGDRGPRIVGMG
DFTPDFIGLSFDERRGGPAREMNLDEDEPATEIPAETTVEAPAETPTPTEEKPKRRRTRKKPEPATEDAPAEAATEAPAG
DDAPTEAAADAPVPEEKPKRRRAPRKKADATPAEAEPDAPAPDGDAEEKPKRRRTRKKKVEEDAPEAADAADPAEATADA
PSAD

Sequences:

>Translated_644_residues
MSPRQDWTPMTTFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMITMLARGRARA
RMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQAIDKGVDVLIATPGRLLDHFERGKLILNDVKVM
VVDEADRMLDMGFIPDIERIFGLVPFTRQTLFFSATMAPEIERITNTFLSNPEKIEVERQSTTSATIEQRLIEFKAPRRD
AQAKMKRDMLRAAITAEGDAFRNAIIFCNRKVDVDIVAKSLKKHNLNAEPIHGDLDQSHRMRTLAGFRDGSITLLVASDV
AARGLDIPNVSHVINYDVPSHAEDYVHRIGRTGRAGKTGVAITLCVPSDEKYLGAIEGLIKQPIPRAEAPMDAGTPKAET
EDKPRRSRRGGRRSEEPKAEEKQADAAPEPAREEAKPEPQRQQQPQPRRERGDRGERNDRGGRGRGRDRGDRGPRIVGMG
DFTPDFIGLSFDERRGGPAREMNLDEDEPATEIPAETTVEAPAETPTPTEEKPKRRRTRKKPEPATEDAPAEAATEAPAG
DDAPTEAAADAPVPEEKPKRRRAPRKKADATPAEAEPDAPAPDGDAEEKPKRRRTRKKKVEEDAPEAADAADPAEATADA
PSAD
>Mature_643_residues
SPRQDWTPMTTFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMITMLARGRARAR
MPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQAIDKGVDVLIATPGRLLDHFERGKLILNDVKVMV
VDEADRMLDMGFIPDIERIFGLVPFTRQTLFFSATMAPEIERITNTFLSNPEKIEVERQSTTSATIEQRLIEFKAPRRDA
QAKMKRDMLRAAITAEGDAFRNAIIFCNRKVDVDIVAKSLKKHNLNAEPIHGDLDQSHRMRTLAGFRDGSITLLVASDVA
ARGLDIPNVSHVINYDVPSHAEDYVHRIGRTGRAGKTGVAITLCVPSDEKYLGAIEGLIKQPIPRAEAPMDAGTPKAETE
DKPRRSRRGGRRSEEPKAEEKQADAAPEPAREEAKPEPQRQQQPQPRRERGDRGERNDRGGRGRGRDRGDRGPRIVGMGD
FTPDFIGLSFDERRGGPAREMNLDEDEPATEIPAETTVEAPAETPTPTEEKPKRRRTRKKPEPATEDAPAEAATEAPAGD
DAPTEAAADAPVPEEKPKRRRAPRKKADATPAEAEPDAPAPDGDAEEKPKRRRTRKKKVEEDAPEAADAADPAEATADAP
SAD

Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI41327771, Length=422, Percent_Identity=36.2559241706161, Blast_Score=269, Evalue=7e-72,
Organism=Homo sapiens, GI20149629, Length=375, Percent_Identity=37.8666666666667, Blast_Score=267, Evalue=2e-71,
Organism=Homo sapiens, GI21071032, Length=401, Percent_Identity=37.6558603491272, Blast_Score=262, Evalue=9e-70,
Organism=Homo sapiens, GI45446747, Length=370, Percent_Identity=36.7567567567568, Blast_Score=256, Evalue=4e-68,
Organism=Homo sapiens, GI45446743, Length=370, Percent_Identity=36.7567567567568, Blast_Score=256, Evalue=4e-68,
Organism=Homo sapiens, GI224593278, Length=384, Percent_Identity=37.5, Blast_Score=249, Evalue=8e-66,
Organism=Homo sapiens, GI41327773, Length=373, Percent_Identity=35.3887399463807, Blast_Score=245, Evalue=7e-65,
Organism=Homo sapiens, GI148613856, Length=365, Percent_Identity=38.3561643835616, Blast_Score=242, Evalue=8e-64,
Organism=Homo sapiens, GI38201710, Length=365, Percent_Identity=38.3561643835616, Blast_Score=242, Evalue=8e-64,
Organism=Homo sapiens, GI222352149, Length=424, Percent_Identity=35.1415094339623, Blast_Score=242, Evalue=8e-64,
Organism=Homo sapiens, GI169881239, Length=402, Percent_Identity=37.8109452736318, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI13514809, Length=402, Percent_Identity=37.8109452736318, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI13129006, Length=406, Percent_Identity=37.192118226601, Blast_Score=240, Evalue=3e-63,
Organism=Homo sapiens, GI301171467, Length=375, Percent_Identity=38.9333333333333, Blast_Score=240, Evalue=3e-63,
Organism=Homo sapiens, GI87196351, Length=375, Percent_Identity=38.9333333333333, Blast_Score=239, Evalue=5e-63,
Organism=Homo sapiens, GI301171475, Length=375, Percent_Identity=38.9333333333333, Blast_Score=239, Evalue=5e-63,
Organism=Homo sapiens, GI13518015, Length=367, Percent_Identity=37.3297002724796, Blast_Score=239, Evalue=7e-63,
Organism=Homo sapiens, GI216548263, Length=367, Percent_Identity=37.3297002724796, Blast_Score=239, Evalue=8e-63,
Organism=Homo sapiens, GI262231852, Length=367, Percent_Identity=37.3297002724796, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI262118318, Length=367, Percent_Identity=37.6021798365123, Blast_Score=238, Evalue=2e-62,
Organism=Homo sapiens, GI50659095, Length=407, Percent_Identity=36.3636363636364, Blast_Score=234, Evalue=2e-61,
Organism=Homo sapiens, GI4758138, Length=380, Percent_Identity=36.3157894736842, Blast_Score=233, Evalue=4e-61,
Organism=Homo sapiens, GI7661920, Length=392, Percent_Identity=35.969387755102, Blast_Score=233, Evalue=6e-61,
Organism=Homo sapiens, GI41327776, Length=375, Percent_Identity=34.9333333333333, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI31542656, Length=379, Percent_Identity=36.4116094986807, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI164664518, Length=396, Percent_Identity=34.0909090909091, Blast_Score=222, Evalue=9e-58,
Organism=Homo sapiens, GI55749865, Length=418, Percent_Identity=33.7320574162679, Blast_Score=217, Evalue=3e-56,
Organism=Homo sapiens, GI188035877, Length=359, Percent_Identity=35.6545961002786, Blast_Score=217, Evalue=3e-56,
Organism=Homo sapiens, GI164419743, Length=361, Percent_Identity=34.9030470914127, Blast_Score=216, Evalue=5e-56,
Organism=Homo sapiens, GI51094101, Length=361, Percent_Identity=34.9030470914127, Blast_Score=216, Evalue=5e-56,
Organism=Homo sapiens, GI13514831, Length=395, Percent_Identity=32.9113924050633, Blast_Score=212, Evalue=8e-55,
Organism=Homo sapiens, GI83700235, Length=390, Percent_Identity=33.3333333333333, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI21040371, Length=364, Percent_Identity=32.6923076923077, Blast_Score=195, Evalue=1e-49,
Organism=Homo sapiens, GI38327634, Length=388, Percent_Identity=32.9896907216495, Blast_Score=194, Evalue=3e-49,
Organism=Homo sapiens, GI4503529, Length=391, Percent_Identity=32.9923273657289, Blast_Score=193, Evalue=4e-49,
Organism=Homo sapiens, GI4758112, Length=364, Percent_Identity=32.1428571428571, Blast_Score=192, Evalue=7e-49,
Organism=Homo sapiens, GI18375623, Length=364, Percent_Identity=32.1428571428571, Blast_Score=192, Evalue=7e-49,
Organism=Homo sapiens, GI41327779, Length=389, Percent_Identity=31.8766066838046, Blast_Score=189, Evalue=5e-48,
Organism=Homo sapiens, GI38569505, Length=399, Percent_Identity=30.8270676691729, Blast_Score=178, Evalue=2e-44,
Organism=Homo sapiens, GI17505907, Length=455, Percent_Identity=29.010989010989, Blast_Score=175, Evalue=9e-44,
Organism=Homo sapiens, GI38569503, Length=401, Percent_Identity=31.4214463840399, Blast_Score=175, Evalue=1e-43,
Organism=Homo sapiens, GI8922886, Length=370, Percent_Identity=32.972972972973, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI9506931, Length=404, Percent_Identity=27.4752475247525, Blast_Score=163, Evalue=4e-40,
Organism=Homo sapiens, GI6005743, Length=366, Percent_Identity=32.7868852459016, Blast_Score=162, Evalue=6e-40,
Organism=Homo sapiens, GI4826686, Length=339, Percent_Identity=31.2684365781711, Blast_Score=155, Evalue=1e-37,
Organism=Homo sapiens, GI164419732, Length=357, Percent_Identity=31.3725490196078, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI62241022, Length=348, Percent_Identity=33.3333333333333, Blast_Score=152, Evalue=7e-37,
Organism=Homo sapiens, GI256223453, Length=362, Percent_Identity=27.9005524861878, Blast_Score=152, Evalue=8e-37,
Organism=Homo sapiens, GI9966805, Length=315, Percent_Identity=30.7936507936508, Blast_Score=149, Evalue=1e-35,
Organism=Homo sapiens, GI154759257, Length=414, Percent_Identity=28.2608695652174, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI62241024, Length=331, Percent_Identity=32.3262839879154, Blast_Score=142, Evalue=1e-33,
Organism=Homo sapiens, GI256773275, Length=417, Percent_Identity=29.2565947242206, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI20336298, Length=217, Percent_Identity=36.8663594470046, Blast_Score=123, Evalue=5e-28,
Organism=Escherichia coli, GI1787016, Length=382, Percent_Identity=45.2879581151832, Blast_Score=319, Evalue=4e-88,
Organism=Escherichia coli, GI87082221, Length=381, Percent_Identity=42.7821522309711, Blast_Score=295, Evalue=5e-81,
Organism=Escherichia coli, GI1790214, Length=419, Percent_Identity=37.9474940334129, Blast_Score=255, Evalue=7e-69,
Organism=Escherichia coli, GI1787605, Length=396, Percent_Identity=38.3838383838384, Blast_Score=246, Evalue=5e-66,
Organism=Escherichia coli, GI1788930, Length=399, Percent_Identity=38.8471177944862, Blast_Score=228, Evalue=1e-60,
Organism=Escherichia coli, GI48994977, Length=373, Percent_Identity=24.3967828418231, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI32565321, Length=408, Percent_Identity=36.2745098039216, Blast_Score=259, Evalue=4e-69,
Organism=Caenorhabditis elegans, GI71995718, Length=375, Percent_Identity=39.4666666666667, Blast_Score=256, Evalue=2e-68,
Organism=Caenorhabditis elegans, GI17555296, Length=454, Percent_Identity=33.4801762114537, Blast_Score=252, Evalue=5e-67,
Organism=Caenorhabditis elegans, GI17510307, Length=369, Percent_Identity=39.5663956639566, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17510309, Length=369, Percent_Identity=39.5663956639566, Blast_Score=249, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI71995514, Length=369, Percent_Identity=39.5663956639566, Blast_Score=249, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI86570094, Length=379, Percent_Identity=37.9947229551451, Blast_Score=244, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI17510559, Length=395, Percent_Identity=36.4556962025316, Blast_Score=240, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI71987143, Length=373, Percent_Identity=35.3887399463807, Blast_Score=235, Evalue=5e-62,
Organism=Caenorhabditis elegans, GI17552642, Length=384, Percent_Identity=37.2395833333333, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI71995724, Length=381, Percent_Identity=35.4330708661417, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17507121, Length=381, Percent_Identity=35.1706036745407, Blast_Score=229, Evalue=4e-60,
Organism=Caenorhabditis elegans, GI115533224, Length=376, Percent_Identity=37.2340425531915, Blast_Score=228, Evalue=5e-60,
Organism=Caenorhabditis elegans, GI17507945, Length=390, Percent_Identity=37.6923076923077, Blast_Score=228, Evalue=6e-60,
Organism=Caenorhabditis elegans, GI17507877, Length=402, Percent_Identity=34.3283582089552, Blast_Score=221, Evalue=8e-58,
Organism=Caenorhabditis elegans, GI17552114, Length=381, Percent_Identity=33.3333333333333, Blast_Score=214, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17537549, Length=371, Percent_Identity=35.5795148247978, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI71999644, Length=379, Percent_Identity=33.245382585752, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI71999646, Length=379, Percent_Identity=33.245382585752, Blast_Score=201, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI17507881, Length=380, Percent_Identity=33.4210526315789, Blast_Score=201, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI17507879, Length=376, Percent_Identity=33.2446808510638, Blast_Score=200, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17509811, Length=383, Percent_Identity=30.0261096605744, Blast_Score=189, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI115532548, Length=379, Percent_Identity=30.8707124010554, Blast_Score=188, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI17505370, Length=369, Percent_Identity=32.7913279132791, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI71982858, Length=390, Percent_Identity=30, Blast_Score=186, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI193208216, Length=410, Percent_Identity=30.9756097560976, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI115532546, Length=379, Percent_Identity=30.8707124010554, Blast_Score=185, Evalue=8e-47,
Organism=Caenorhabditis elegans, GI17507641, Length=407, Percent_Identity=31.2039312039312, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17508543, Length=388, Percent_Identity=31.1855670103093, Blast_Score=171, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17536103, Length=416, Percent_Identity=29.3269230769231, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17536101, Length=416, Percent_Identity=29.3269230769231, Blast_Score=168, Evalue=7e-42,
Organism=Caenorhabditis elegans, GI17536099, Length=416, Percent_Identity=29.3269230769231, Blast_Score=168, Evalue=8e-42,
Organism=Caenorhabditis elegans, GI71990816, Length=350, Percent_Identity=32.5714285714286, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI32564046, Length=398, Percent_Identity=30.9045226130653, Blast_Score=166, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI193206561, Length=370, Percent_Identity=28.6486486486486, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17556951, Length=389, Percent_Identity=28.2776349614396, Blast_Score=161, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI25148203, Length=432, Percent_Identity=24.7685185185185, Blast_Score=152, Evalue=6e-37,
Organism=Caenorhabditis elegans, GI25148291, Length=339, Percent_Identity=28.9085545722714, Blast_Score=139, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI17553716, Length=363, Percent_Identity=28.099173553719, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI71997889, Length=363, Percent_Identity=28.6501377410468, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71982862, Length=202, Percent_Identity=32.1782178217822, Blast_Score=117, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI71987152, Length=87, Percent_Identity=49.4252873563218, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17557982, Length=373, Percent_Identity=24.6648793565684, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71987997, Length=356, Percent_Identity=25, Blast_Score=76, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17566630, Length=346, Percent_Identity=23.4104046242775, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71987993, Length=356, Percent_Identity=25, Blast_Score=75, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6324778, Length=422, Percent_Identity=37.6777251184834, Blast_Score=261, Evalue=3e-70,
Organism=Saccharomyces cerevisiae, GI6325138, Length=389, Percent_Identity=39.5886889460154, Blast_Score=260, Evalue=4e-70,
Organism=Saccharomyces cerevisiae, GI6321856, Length=377, Percent_Identity=37.4005305039788, Blast_Score=257, Evalue=3e-69,
Organism=Saccharomyces cerevisiae, GI6321360, Length=399, Percent_Identity=39.3483709273183, Blast_Score=251, Evalue=2e-67,
Organism=Saccharomyces cerevisiae, GI6324217, Length=374, Percent_Identity=39.8395721925134, Blast_Score=251, Evalue=2e-67,
Organism=Saccharomyces cerevisiae, GI6323021, Length=367, Percent_Identity=35.149863760218, Blast_Score=231, Evalue=2e-61,
Organism=Saccharomyces cerevisiae, GI6320449, Length=392, Percent_Identity=35.2040816326531, Blast_Score=221, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6320224, Length=370, Percent_Identity=34.8648648648649, Blast_Score=221, Evalue=3e-58,
Organism=Saccharomyces cerevisiae, GI6320041, Length=391, Percent_Identity=33.7595907928389, Blast_Score=220, Evalue=7e-58,
Organism=Saccharomyces cerevisiae, GI6320173, Length=442, Percent_Identity=31.6742081447964, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6322912, Length=383, Percent_Identity=34.2036553524804, Blast_Score=204, Evalue=3e-53,
Organism=Saccharomyces cerevisiae, GI6322323, Length=383, Percent_Identity=34.2036553524804, Blast_Score=204, Evalue=3e-53,
Organism=Saccharomyces cerevisiae, GI6323947, Length=394, Percent_Identity=33.756345177665, Blast_Score=200, Evalue=7e-52,
Organism=Saccharomyces cerevisiae, GI6322427, Length=370, Percent_Identity=32.4324324324324, Blast_Score=192, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6324620, Length=385, Percent_Identity=32.7272727272727, Blast_Score=190, Evalue=7e-49,
Organism=Saccharomyces cerevisiae, GI6321963, Length=380, Percent_Identity=33.4210526315789, Blast_Score=187, Evalue=6e-48,
Organism=Saccharomyces cerevisiae, GI6320119, Length=376, Percent_Identity=31.1170212765957, Blast_Score=181, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6319714, Length=383, Percent_Identity=30.8093994778068, Blast_Score=179, Evalue=9e-46,
Organism=Saccharomyces cerevisiae, GI6319618, Length=433, Percent_Identity=29.3302540415704, Blast_Score=177, Evalue=5e-45,
Organism=Saccharomyces cerevisiae, GI6321267, Length=459, Percent_Identity=29.8474945533769, Blast_Score=169, Evalue=1e-42,
Organism=Saccharomyces cerevisiae, GI6321111, Length=393, Percent_Identity=32.0610687022901, Blast_Score=166, Evalue=8e-42,
Organism=Saccharomyces cerevisiae, GI6320400, Length=382, Percent_Identity=31.6753926701571, Blast_Score=160, Evalue=6e-40,
Organism=Saccharomyces cerevisiae, GI6322876, Length=426, Percent_Identity=29.5774647887324, Blast_Score=142, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6324366, Length=413, Percent_Identity=26.1501210653753, Blast_Score=119, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6321374, Length=422, Percent_Identity=24.6445497630332, Blast_Score=103, Evalue=8e-23,
Organism=Saccharomyces cerevisiae, GI6323306, Length=327, Percent_Identity=25.3822629969419, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI17985987, Length=395, Percent_Identity=39.2405063291139, Blast_Score=263, Evalue=3e-70,
Organism=Drosophila melanogaster, GI17977678, Length=451, Percent_Identity=37.0288248337029, Blast_Score=259, Evalue=3e-69,
Organism=Drosophila melanogaster, GI24662330, Length=373, Percent_Identity=38.3378016085791, Blast_Score=259, Evalue=4e-69,
Organism=Drosophila melanogaster, GI24584399, Length=371, Percent_Identity=38.544474393531, Blast_Score=258, Evalue=1e-68,
Organism=Drosophila melanogaster, GI24584994, Length=393, Percent_Identity=36.3867684478371, Blast_Score=256, Evalue=4e-68,
Organism=Drosophila melanogaster, GI24585582, Length=382, Percent_Identity=35.8638743455497, Blast_Score=255, Evalue=5e-68,
Organism=Drosophila melanogaster, GI28574962, Length=364, Percent_Identity=38.7362637362637, Blast_Score=252, Evalue=6e-67,
Organism=Drosophila melanogaster, GI24642151, Length=373, Percent_Identity=36.1930294906166, Blast_Score=251, Evalue=8e-67,
Organism=Drosophila melanogaster, GI18857967, Length=367, Percent_Identity=36.5122615803815, Blast_Score=241, Evalue=1e-63,
Organism=Drosophila melanogaster, GI21356161, Length=456, Percent_Identity=34.4298245614035, Blast_Score=240, Evalue=2e-63,
Organism=Drosophila melanogaster, GI21355075, Length=370, Percent_Identity=36.7567567567568, Blast_Score=228, Evalue=9e-60,
Organism=Drosophila melanogaster, GI24644479, Length=377, Percent_Identity=35.5437665782493, Blast_Score=228, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24644483, Length=377, Percent_Identity=35.5437665782493, Blast_Score=226, Evalue=4e-59,
Organism=Drosophila melanogaster, GI281361218, Length=377, Percent_Identity=35.5437665782493, Blast_Score=225, Evalue=6e-59,
Organism=Drosophila melanogaster, GI24644481, Length=377, Percent_Identity=35.5437665782493, Blast_Score=225, Evalue=6e-59,
Organism=Drosophila melanogaster, GI24644487, Length=377, Percent_Identity=35.5437665782493, Blast_Score=225, Evalue=8e-59,
Organism=Drosophila melanogaster, GI45551833, Length=377, Percent_Identity=35.5437665782493, Blast_Score=225, Evalue=8e-59,
Organism=Drosophila melanogaster, GI24644485, Length=377, Percent_Identity=35.5437665782493, Blast_Score=225, Evalue=8e-59,
Organism=Drosophila melanogaster, GI24645031, Length=383, Percent_Identity=35.509138381201, Blast_Score=223, Evalue=4e-58,
Organism=Drosophila melanogaster, GI24582080, Length=372, Percent_Identity=35.4838709677419, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI24582078, Length=372, Percent_Identity=35.4838709677419, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI17136248, Length=372, Percent_Identity=35.4838709677419, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI24582075, Length=372, Percent_Identity=35.4838709677419, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI28575014, Length=372, Percent_Identity=32.258064516129, Blast_Score=209, Evalue=4e-54,
Organism=Drosophila melanogaster, GI17136814, Length=390, Percent_Identity=35.6410256410256, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24583281, Length=408, Percent_Identity=32.1078431372549, Blast_Score=202, Evalue=5e-52,
Organism=Drosophila melanogaster, GI24583279, Length=408, Percent_Identity=32.1078431372549, Blast_Score=202, Evalue=6e-52,
Organism=Drosophila melanogaster, GI28571808, Length=359, Percent_Identity=32.3119777158774, Blast_Score=199, Evalue=5e-51,
Organism=Drosophila melanogaster, GI28571809, Length=359, Percent_Identity=32.3119777158774, Blast_Score=199, Evalue=5e-51,
Organism=Drosophila melanogaster, GI281365720, Length=320, Percent_Identity=35.625, Blast_Score=192, Evalue=6e-49,
Organism=Drosophila melanogaster, GI24642822, Length=397, Percent_Identity=30.4785894206549, Blast_Score=190, Evalue=3e-48,
Organism=Drosophila melanogaster, GI21355559, Length=387, Percent_Identity=32.0413436692506, Blast_Score=182, Evalue=5e-46,
Organism=Drosophila melanogaster, GI24581954, Length=363, Percent_Identity=31.404958677686, Blast_Score=182, Evalue=7e-46,
Organism=Drosophila melanogaster, GI24581952, Length=363, Percent_Identity=31.404958677686, Blast_Score=182, Evalue=7e-46,
Organism=Drosophila melanogaster, GI24581956, Length=363, Percent_Identity=31.404958677686, Blast_Score=182, Evalue=7e-46,
Organism=Drosophila melanogaster, GI28571338, Length=420, Percent_Identity=27.3809523809524, Blast_Score=174, Evalue=2e-43,
Organism=Drosophila melanogaster, GI18859659, Length=420, Percent_Identity=27.3809523809524, Blast_Score=173, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24666101, Length=380, Percent_Identity=31.5789473684211, Blast_Score=170, Evalue=4e-42,
Organism=Drosophila melanogaster, GI20130173, Length=312, Percent_Identity=31.4102564102564, Blast_Score=162, Evalue=7e-40,
Organism=Drosophila melanogaster, GI17647335, Length=366, Percent_Identity=29.2349726775956, Blast_Score=161, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24643725, Length=401, Percent_Identity=27.930174563591, Blast_Score=154, Evalue=3e-37,
Organism=Drosophila melanogaster, GI24668515, Length=338, Percent_Identity=27.5147928994083, Blast_Score=133, Evalue=3e-31,
Organism=Drosophila melanogaster, GI17136666, Length=405, Percent_Identity=27.9012345679012, Blast_Score=133, Evalue=4e-31,
Organism=Drosophila melanogaster, GI19920478, Length=379, Percent_Identity=26.9129287598945, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24640164, Length=351, Percent_Identity=26.7806267806268, Blast_Score=124, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 70569; Mature: 70438

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRQDWTPMTTFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTG
CCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
KTASFTLPMITMLARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGV
CCEEEHHHHHHHHHCCHHHHCCCCCEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
SFKEQEQAIDKGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIPDIERI
CHHHHHHHHHCCCEEEEECCHHHHHHHHCCCEEEECEEEEEECCHHHHHHCCCCCCHHHH
FGLVPFTRQTLFFSATMAPEIERITNTFLSNPEKIEVERQSTTSATIEQRLIEFKAPRRD
HCCCCHHHHHHEEEHHCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHH
AQAKMKRDMLRAAITAEGDAFRNAIIFCNRKVDVDIVAKSLKKHNLNAEPIHGDLDQSHR
HHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
MRTLAGFRDGSITLLVASDVAARGLDIPNVSHVINYDVPSHAEDYVHRIGRTGRAGKTGV
HHHHHCCCCCCEEEEEECCHHHCCCCCCCCHHEEECCCCCHHHHHHHHHCCCCCCCCCCE
AITLCVPSDEKYLGAIEGLIKQPIPRAEAPMDAGTPKAETEDKPRRSRRGGRRSEEPKAE
EEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHH
EKQADAAPEPAREEAKPEPQRQQQPQPRRERGDRGERNDRGGRGRGRDRGDRGPRIVGMG
HHHCCCCCCCHHHHCCCCCHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
DFTPDFIGLSFDERRGGPAREMNLDEDEPATEIPAETTVEAPAETPTPTEEKPKRRRTRK
CCCHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
KPEPATEDAPAEAATEAPAGDDAPTEAAADAPVPEEKPKRRRAPRKKADATPAEAEPDAP
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCCCCCCCCCCCC
APDGDAEEKPKRRRTRKKKVEEDAPEAADAADPAEATADAPSAD
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
SPRQDWTPMTTFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTG
CCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
KTASFTLPMITMLARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGV
CCEEEHHHHHHHHHCCHHHHCCCCCEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
SFKEQEQAIDKGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIPDIERI
CHHHHHHHHHCCCEEEEECCHHHHHHHHCCCEEEECEEEEEECCHHHHHHCCCCCCHHHH
FGLVPFTRQTLFFSATMAPEIERITNTFLSNPEKIEVERQSTTSATIEQRLIEFKAPRRD
HCCCCHHHHHHEEEHHCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHH
AQAKMKRDMLRAAITAEGDAFRNAIIFCNRKVDVDIVAKSLKKHNLNAEPIHGDLDQSHR
HHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
MRTLAGFRDGSITLLVASDVAARGLDIPNVSHVINYDVPSHAEDYVHRIGRTGRAGKTGV
HHHHHCCCCCCEEEEEECCHHHCCCCCCCCHHEEECCCCCHHHHHHHHHCCCCCCCCCCE
AITLCVPSDEKYLGAIEGLIKQPIPRAEAPMDAGTPKAETEDKPRRSRRGGRRSEEPKAE
EEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHH
EKQADAAPEPAREEAKPEPQRQQQPQPRRERGDRGERNDRGGRGRGRDRGDRGPRIVGMG
HHHCCCCCCCHHHHCCCCCHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
DFTPDFIGLSFDERRGGPAREMNLDEDEPATEIPAETTVEAPAETPTPTEEKPKRRRTRK
CCCHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
KPEPATEDAPAEAATEAPAGDDAPTEAAADAPVPEEKPKRRRAPRKKADATPAEAEPDAP
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCCCCCCCCCCCC
APDGDAEEKPKRRRTRKKKVEEDAPEAADAADPAEATADAPSAD
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]