Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053652

Identifier: 89053652

GI number: 89053652

Start: 1125076

End: 1126035

Strand: Reverse

Name: 89053652

Synonym: Jann_1161

Alternate gene names: NA

Gene position: 1126035-1125076 (Counterclockwise)

Preceding gene: 89053653

Following gene: 89053651

Centisome position: 26.08

GC content: 59.27

Gene sequence:

>960_bases
ATGAAAGTACTGAAAATCAAGACCGCCGTTGCGGCGCTCGCCTTGGCCACTTTTGCCGCGCCTGTCGCAATGGCTGAAGA
TTATCCTGACCGTACCATTGAGGTGATCCATGCCTATGGGCCCGGCGGCGGCACCGACCGTTTCGTACGCGCTGTGGCGG
TCCCGTTCGAGGAAATTGCTGGCGTCTCAATGGTGCCGATCGCTATTCAAGGTGGCGGCGGGATGCCGGCGTATGCCAAT
TTCCTGCAGCGCCGTGTCGACGGCTATACCATGAAGGCCATCAGTCCGGACCAGATCATCGCGCATGTGTTGGGCCGTCA
GGACATGGGTGAATTTACGCCGCTTGCCCGCGTACAATACGATCAGGGCATGATCATCGTGCCAGCCGACAGCCCGTTCC
AGACGATTCAGGAATTCATCGAACATGCGCGCGAAAACCCCGGTGATCTGACCGTGGGCATCACCGGCGCTGCAGGCTTT
GATGATACCGCAATGGGCCTGTGGAACATCGAAACAGGCACAGAAGTGACGACCGTTCCGTTCGGATCTTCCGAGATGGT
ATCAAACACGCTTGGCGGTCAGGTTGACGCTATGCACGAAGAATACGGCCCCGCCCGTGGTTTGATTGACTCCGGTGACA
TGCGCCCGCTGGTCGTGTTTTCGGATGAACGCCTGCCGGTGTTGCCCGATGTCCCGACCGCACAGGAACTCGGCTATGAT
GTGACGCTGGGTCGCTGGCGCGCCTTTGCGATGCCTGCCGACGCGGATCCCGCACAGGTCGAGCGGATGTTCGAGCTTGT
CAGCCAGGCCGTCGCTTCTGACGCCTACCAAGAGGTGCAAGAGCAGGCCGCGTTGCAATACCGCTCCGTGCTGCTTGGCC
CAGATGAGTTTCAGGAATTCATTGACGCCGAAATCGCGACTTATACAGAGGTGCTGACAGCCCTCGGCCTCGTAGAGTGA

Upstream 100 bases:

>100_bases
AATAGACAATTGGTCGGATAAACTGATCGGGGCGCCCCACGATCACGGGCGGAGGCGCTTGAACGAAAAAAACACGTGAC
ATTTTTTGGGAGGAAAGAAA

Downstream 100 bases:

>100_bases
TACCTCCCAGCCGCGCGGGGCTTCGGCCTTGCGCGGCACCTGCCTTCCCCTGCAATCCTCTGGTTTAGGAATGGACTCAT
GGCCCATCGCCTACTGAATC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF7 [H]

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKVLKIKTAVAALALATFAAPVAMAEDYPDRTIEVIHAYGPGGGTDRFVRAVAVPFEEIAGVSMVPIAIQGGGGMPAYAN
FLQRRVDGYTMKAISPDQIIAHVLGRQDMGEFTPLARVQYDQGMIIVPADSPFQTIQEFIEHARENPGDLTVGITGAAGF
DDTAMGLWNIETGTEVTTVPFGSSEMVSNTLGGQVDAMHEEYGPARGLIDSGDMRPLVVFSDERLPVLPDVPTAQELGYD
VTLGRWRAFAMPADADPAQVERMFELVSQAVASDAYQEVQEQAALQYRSVLLGPDEFQEFIDAEIATYTEVLTALGLVE

Sequences:

>Translated_319_residues
MKVLKIKTAVAALALATFAAPVAMAEDYPDRTIEVIHAYGPGGGTDRFVRAVAVPFEEIAGVSMVPIAIQGGGGMPAYAN
FLQRRVDGYTMKAISPDQIIAHVLGRQDMGEFTPLARVQYDQGMIIVPADSPFQTIQEFIEHARENPGDLTVGITGAAGF
DDTAMGLWNIETGTEVTTVPFGSSEMVSNTLGGQVDAMHEEYGPARGLIDSGDMRPLVVFSDERLPVLPDVPTAQELGYD
VTLGRWRAFAMPADADPAQVERMFELVSQAVASDAYQEVQEQAALQYRSVLLGPDEFQEFIDAEIATYTEVLTALGLVE
>Mature_319_residues
MKVLKIKTAVAALALATFAAPVAMAEDYPDRTIEVIHAYGPGGGTDRFVRAVAVPFEEIAGVSMVPIAIQGGGGMPAYAN
FLQRRVDGYTMKAISPDQIIAHVLGRQDMGEFTPLARVQYDQGMIIVPADSPFQTIQEFIEHARENPGDLTVGITGAAGF
DDTAMGLWNIETGTEVTTVPFGSSEMVSNTLGGQVDAMHEEYGPARGLIDSGDMRPLVVFSDERLPVLPDVPTAQELGYD
VTLGRWRAFAMPADADPAQVERMFELVSQAVASDAYQEVQEQAALQYRSVLLGPDEFQEFIDAEIATYTEVLTALGLVE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064
- InterPro:   IPR006311 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34378; Mature: 34378

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLKIKTAVAALALATFAAPVAMAEDYPDRTIEVIHAYGPGGGTDRFVRAVAVPFEEIA
CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHC
GVSMVPIAIQGGGGMPAYANFLQRRVDGYTMKAISPDQIIAHVLGRQDMGEFTPLARVQY
CCEEEEEEEECCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCCCCCCCCHHEEEE
DQGMIIVPADSPFQTIQEFIEHARENPGDLTVGITGAAGFDDTAMGLWNIETGTEVTTVP
CCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEC
FGSSEMVSNTLGGQVDAMHEEYGPARGLIDSGDMRPLVVFSDERLPVLPDVPTAQELGYD
CCCHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCC
VTLGRWRAFAMPADADPAQVERMFELVSQAVASDAYQEVQEQAALQYRSVLLGPDEFQEF
EEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IDAEIATYTEVLTALGLVE
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKVLKIKTAVAALALATFAAPVAMAEDYPDRTIEVIHAYGPGGGTDRFVRAVAVPFEEIA
CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHC
GVSMVPIAIQGGGGMPAYANFLQRRVDGYTMKAISPDQIIAHVLGRQDMGEFTPLARVQY
CCEEEEEEEECCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCCCCCCCCHHEEEE
DQGMIIVPADSPFQTIQEFIEHARENPGDLTVGITGAAGFDDTAMGLWNIETGTEVTTVP
CCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEC
FGSSEMVSNTLGGQVDAMHEEYGPARGLIDSGDMRPLVVFSDERLPVLPDVPTAQELGYD
CCCHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCC
VTLGRWRAFAMPADADPAQVERMFELVSQAVASDAYQEVQEQAALQYRSVLLGPDEFQEF
EEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IDAEIATYTEVLTALGLVE
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7851418 [H]