| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053626
Identifier: 89053626
GI number: 89053626
Start: 1097016
End: 1097810
Strand: Reverse
Name: 89053626
Synonym: Jann_1135
Alternate gene names: NA
Gene position: 1097810-1097016 (Counterclockwise)
Preceding gene: 89053627
Following gene: 89053625
Centisome position: 25.42
GC content: 69.06
Gene sequence:
>795_bases ATGCTCGCCACCCTGCCCATGTACCTGCGCGATGAGACACGGGCCGCCCATGATGCGCTCTGGTCGCTGACCCGGGACGC GCTGCGTGACGCCGGATATCGAGACCAGGACGGCCATCCCGCCCCGAATGCGCTGGACCATGCCACGCCGCACACCGCCA CCTGGACCCGGCCCGACCTGTTGCTGGGTCAGGTCTGCAACCTGCCCTACCGCACCCATGTCCACGCCGTGACCGCCCGT GTCGGCACCTGTGACTATGGCCTGCCGGACACGCCACCGGGTCACTATTTTTCGTACTTTGTCATCCGTAAGGATGACCC CCGCGACACGCCCGCCGCCTTCGCCACGGCGCGCCTTGCCGTTAACGAGCCCGACAGCCACTCCGGCTGGGGGGCGGCCT GGACCTACGCCCGCCAAAATGGTTTCACCTTCACCCGCGCGGTCCTTACCGGGTCCCACAGCGCCTCCGCCCGCGCATTG GCCGATGGGCGCGCGGACATCGCCTGCATTGACGCGATCAGCTGGCAGATGATCCGGCGCTATGACACCAGCGCGCGCCA CCTGCGCCTGATCGCCCGCACGGACACCTCTCCGGGCCAGACCCTGATCACGGCGCGCCGCAACGATCCCGCCCCGATCC GCGCCGCCGTCACCCAGGCCCTCACCGCCCTACCTGCGGCCCATAAAGACACGCTCCTGCTGCGGGGCCTCGCCGACCTG CCGGACGCTGATTACCACGCCCTGGCCCCGCCCGACCCGGCCCCAATCGCCCAAAATTCAGCCAAAATCGCCTGA
Upstream 100 bases:
>100_bases TGCGCATGGTGGCCCCGATGCTTGGCATCACCGACCGTGACAGCAACCTCGCCCGCCGCCGGGTTGAGGCCAGCCGCTAA CACCGGCAACCGCCAACACC
Downstream 100 bases:
>100_bases TCGGCCCGGTTGCCCTTGCGGAACCCACCCCGGCCTCGCCCCTAAAATGTTGCAATCGCGCGCCGCTTTGGCGCAAAAGA TGCGAACCATTGGGGACATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MLATLPMYLRDETRAAHDALWSLTRDALRDAGYRDQDGHPAPNALDHATPHTATWTRPDLLLGQVCNLPYRTHVHAVTAR VGTCDYGLPDTPPGHYFSYFVIRKDDPRDTPAAFATARLAVNEPDSHSGWGAAWTYARQNGFTFTRAVLTGSHSASARAL ADGRADIACIDAISWQMIRRYDTSARHLRLIARTDTSPGQTLITARRNDPAPIRAAVTQALTALPAAHKDTLLLRGLADL PDADYHALAPPDPAPIAQNSAKIA
Sequences:
>Translated_264_residues MLATLPMYLRDETRAAHDALWSLTRDALRDAGYRDQDGHPAPNALDHATPHTATWTRPDLLLGQVCNLPYRTHVHAVTAR VGTCDYGLPDTPPGHYFSYFVIRKDDPRDTPAAFATARLAVNEPDSHSGWGAAWTYARQNGFTFTRAVLTGSHSASARAL ADGRADIACIDAISWQMIRRYDTSARHLRLIARTDTSPGQTLITARRNDPAPIRAAVTQALTALPAAHKDTLLLRGLADL PDADYHALAPPDPAPIAQNSAKIA >Mature_264_residues MLATLPMYLRDETRAAHDALWSLTRDALRDAGYRDQDGHPAPNALDHATPHTATWTRPDLLLGQVCNLPYRTHVHAVTAR VGTCDYGLPDTPPGHYFSYFVIRKDDPRDTPAAFATARLAVNEPDSHSGWGAAWTYARQNGFTFTRAVLTGSHSASARAL ADGRADIACIDAISWQMIRRYDTSARHLRLIARTDTSPGQTLITARRNDPAPIRAAVTQALTALPAAHKDTLLLRGLADL PDADYHALAPPDPAPIAQNSAKIA
Specific function: Unknown
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28755; Mature: 28755
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLATLPMYLRDETRAAHDALWSLTRDALRDAGYRDQDGHPAPNALDHATPHTATWTRPDL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LLGQVCNLPYRTHVHAVTARVGTCDYGLPDTPPGHYFSYFVIRKDDPRDTPAAFATARLA HHHHHHCCCCHHHHEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHEEEEE VNEPDSHSGWGAAWTYARQNGFTFTRAVLTGSHSASARALADGRADIACIDAISWQMIRR ECCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHCCCCCEEEHHHHHHHHHHH YDTSARHLRLIARTDTSPGQTLITARRNDPAPIRAAVTQALTALPAAHKDTLLLRGLADL HCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHEEHHHHCC PDADYHALAPPDPAPIAQNSAKIA CCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLATLPMYLRDETRAAHDALWSLTRDALRDAGYRDQDGHPAPNALDHATPHTATWTRPDL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LLGQVCNLPYRTHVHAVTARVGTCDYGLPDTPPGHYFSYFVIRKDDPRDTPAAFATARLA HHHHHHCCCCHHHHEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHEEEEE VNEPDSHSGWGAAWTYARQNGFTFTRAVLTGSHSASARALADGRADIACIDAISWQMIRR ECCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHCCCCCEEEHHHHHHHHHHH YDTSARHLRLIARTDTSPGQTLITARRNDPAPIRAAVTQALTALPAAHKDTLLLRGLADL HCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHEEHHHHCC PDADYHALAPPDPAPIAQNSAKIA CCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA