| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is hisQ [H]
Identifier: 89053621
GI number: 89053621
Start: 1091904
End: 1092785
Strand: Reverse
Name: hisQ [H]
Synonym: Jann_1130
Alternate gene names: 89053621
Gene position: 1092785-1091904 (Counterclockwise)
Preceding gene: 89053622
Following gene: 89053620
Centisome position: 25.31
GC content: 63.38
Gene sequence:
>882_bases ATGTTCAGCTTCTGCGAAGACCCCTCCACGCTTGCGACGTTCCAATGGTTCAGCTGCTACCTGACCAATGGCGTCCATAT GCTGTTCTATCAGAGCTTCCTGACGGTTGCGGTGCTTCTGGCGGTCGCCGCCCCCCTGTCGCTGGCGTTTGGCTTTGCCT CTGCCACTGCATCCCGGTCCCCGGTTCTTCCGCTGCGCCTTGTCGGCAAGGGCTATACGTCCATGGTGCGCGGCATCCCG GACATCGTGTTCTTCCTGTTCTTCGTCCTCGTCCTGGATCAGGGGATCGAATACCTGCGCCACACCATCGCCTGCCCCGA CTGGGACGAGCCGATCCGCCAGGGCGCGAACTTTCTGGTCTGTGACGCCGCCCGCACGCCCCAGGGCGCCGCCCCGCAAT GGGTGCACGAGACCTATAACTTCGGCCTTGCCGCGCTGACCTACGCCATCGTCTTCGGGGCCTTTTGCGGGAATGTCCTT TACGGTGCGATGAACGCGGTGCCCCGGCCGCAGTTGGAAACCGCCGCCGCTTACGGCCTGTCGACGCGCCAGATCTTCTG GCGCATCCTGGTGCCGCAGATGTGGATCTACGCGCTGCCGGGCCTTTCCAACATCTGGATGATCCTGATCAAAGCGACAC CCTTGCTGTTCCTTCTGGGCATTGAGGATATCGTCTACTGGGCCCGAGAAATTGGCGGCTCGCGCAACGCCCGCTTTACC TATCCGCACCCCGACTGGCGCTTCTGGTACTTCCTGGGCCTGCTGATCTTCTACCTCTGCTTCACACGACTGTCCGAGAT TGTGCTGGCCCGCCTCACGCGCCGCCTGTCGCGGGGGCAGGCCACGGCGGGCGGCGACGCGATGCGAAAGGCTGCGGCTT GA
Upstream 100 bases:
>100_bases AGGCCGGTGTCCTGGCTGTCTAACAGAGGCCACGGCGCGCGGCGCTCCCCCTTCATCTGGGCACATACACCTCGATCCCG CCCCCAACCCCAAGCCCCCC
Downstream 100 bases:
>100_bases CCCGCCGCATGCGCCACGCGCCCAAGGCTTTTGCAAAAGCCTTGCCAGAGCCTTGCAAGGCTCTGGTCACGCCCTTGCAA GGGCGTGGGAAAACCCTTGC
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MFSFCEDPSTLATFQWFSCYLTNGVHMLFYQSFLTVAVLLAVAAPLSLAFGFASATASRSPVLPLRLVGKGYTSMVRGIP DIVFFLFFVLVLDQGIEYLRHTIACPDWDEPIRQGANFLVCDAARTPQGAAPQWVHETYNFGLAALTYAIVFGAFCGNVL YGAMNAVPRPQLETAAAYGLSTRQIFWRILVPQMWIYALPGLSNIWMILIKATPLLFLLGIEDIVYWAREIGGSRNARFT YPHPDWRFWYFLGLLIFYLCFTRLSEIVLARLTRRLSRGQATAGGDAMRKAAA
Sequences:
>Translated_293_residues MFSFCEDPSTLATFQWFSCYLTNGVHMLFYQSFLTVAVLLAVAAPLSLAFGFASATASRSPVLPLRLVGKGYTSMVRGIP DIVFFLFFVLVLDQGIEYLRHTIACPDWDEPIRQGANFLVCDAARTPQGAAPQWVHETYNFGLAALTYAIVFGAFCGNVL YGAMNAVPRPQLETAAAYGLSTRQIFWRILVPQMWIYALPGLSNIWMILIKATPLLFLLGIEDIVYWAREIGGSRNARFT YPHPDWRFWYFLGLLIFYLCFTRLSEIVLARLTRRLSRGQATAGGDAMRKAAA >Mature_293_residues MFSFCEDPSTLATFQWFSCYLTNGVHMLFYQSFLTVAVLLAVAAPLSLAFGFASATASRSPVLPLRLVGKGYTSMVRGIP DIVFFLFFVLVLDQGIEYLRHTIACPDWDEPIRQGANFLVCDAARTPQGAAPQWVHETYNFGLAALTYAIVFGAFCGNVL YGAMNAVPRPQLETAAAYGLSTRQIFWRILVPQMWIYALPGLSNIWMILIKATPLLFLLGIEDIVYWAREIGGSRNARFT YPHPDWRFWYFLGLLIFYLCFTRLSEIVLARLTRRLSRGQATAGGDAMRKAAA
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788646, Length=240, Percent_Identity=29.1666666666667, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1787087, Length=218, Percent_Identity=29.3577981651376, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32860; Mature: 32860
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSFCEDPSTLATFQWFSCYLTNGVHMLFYQSFLTVAVLLAVAAPLSLAFGFASATASRS CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PVLPLRLVGKGYTSMVRGIPDIVFFLFFVLVLDQGIEYLRHTIACPDWDEPIRQGANFLV CCCHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEE CDAARTPQGAAPQWVHETYNFGLAALTYAIVFGAFCGNVLYGAMNAVPRPQLETAAAYGL EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC STRQIFWRILVPQMWIYALPGLSNIWMILIKATPLLFLLGIEDIVYWAREIGGSRNARFT HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEC YPHPDWRFWYFLGLLIFYLCFTRLSEIVLARLTRRLSRGQATAGGDAMRKAAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC >Mature Secondary Structure MFSFCEDPSTLATFQWFSCYLTNGVHMLFYQSFLTVAVLLAVAAPLSLAFGFASATASRS CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PVLPLRLVGKGYTSMVRGIPDIVFFLFFVLVLDQGIEYLRHTIACPDWDEPIRQGANFLV CCCHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEE CDAARTPQGAAPQWVHETYNFGLAALTYAIVFGAFCGNVLYGAMNAVPRPQLETAAAYGL EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC STRQIFWRILVPQMWIYALPGLSNIWMILIKATPLLFLLGIEDIVYWAREIGGSRNARFT HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEC YPHPDWRFWYFLGLLIFYLCFTRLSEIVLARLTRRLSRGQATAGGDAMRKAAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]