Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053509

Identifier: 89053509

GI number: 89053509

Start: 972232

End: 972723

Strand: Reverse

Name: 89053509

Synonym: Jann_1018

Alternate gene names: NA

Gene position: 972723-972232 (Counterclockwise)

Preceding gene: 89053510

Following gene: 89053506

Centisome position: 22.53

GC content: 67.28

Gene sequence:

>492_bases
ATGAAAAAACAACGCAAGAAACCAAGCGCCAGGCGCAAAGGCCCCTCCGCACCTGCGCCGGAGGCCACGACAACCCGCCG
CGGGGCGCTGCGCCACCTGCGCAACGCGGCCATTGCTCTACCGGTTCTGGGGGGTGCGGGCTATGTCACCACCCAACGGG
TCCAGGCCTCCATCTGCGAGCTGGACCTGACGAAAATCGGCGATGGCCTGCCCGCCGTGGTTCAGGTCCACGATCCCCAA
TGCAGCCTCTGCGTGACCCTGCAACGCCAGACCCGGCGGGCTCTGCGGGCCTATGACGACGACAGCCACCACTTCCTCGT
CGCCAATATCGTCACGACCGAGGGCCAGTATTTCGCCCGCCGCCACGGTGTGGGCAACGTCACCCTCGTGCTGCTGGATG
GTGCCGGCCAACAGGTCGGCGTGGTCCGGGGGCCCCTGTCGAACGAGGCGCTGGCCGATGCCATCGCAGCCCATCTCGGC
CCGGTCGCATAA

Upstream 100 bases:

>100_bases
CTGATCTTCTGCCAAAGGGTCTGAGCCTCGCGTCCTTGTGATTGGTCGTCCAAGGCGCGCTGCCCCTAGGCTCTCAGCAA
AAGATGCTCCGGGGGACACG

Downstream 100 bases:

>100_bases
CATGTGCCGCAGAGCGTATCCCCACGGGACGGCGGGCGGGGCGTCTTTGGCCTTCAGGCCAAACAGCGTCGCCGCCGTCC
CGAACCCTACCCGCAGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKKQRKKPSARRKGPSAPAPEATTTRRGALRHLRNAAIALPVLGGAGYVTTQRVQASICELDLTKIGDGLPAVVQVHDPQ
CSLCVTLQRQTRRALRAYDDDSHHFLVANIVTTEGQYFARRHGVGNVTLVLLDGAGQQVGVVRGPLSNEALADAIAAHLG
PVA

Sequences:

>Translated_163_residues
MKKQRKKPSARRKGPSAPAPEATTTRRGALRHLRNAAIALPVLGGAGYVTTQRVQASICELDLTKIGDGLPAVVQVHDPQ
CSLCVTLQRQTRRALRAYDDDSHHFLVANIVTTEGQYFARRHGVGNVTLVLLDGAGQQVGVVRGPLSNEALADAIAAHLG
PVA
>Mature_163_residues
MKKQRKKPSARRKGPSAPAPEATTTRRGALRHLRNAAIALPVLGGAGYVTTQRVQASICELDLTKIGDGLPAVVQVHDPQ
CSLCVTLQRQTRRALRAYDDDSHHFLVANIVTTEGQYFARRHGVGNVTLVLLDGAGQQVGVVRGPLSNEALADAIAAHLG
PVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17356; Mature: 17356

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQRKKPSARRKGPSAPAPEATTTRRGALRHLRNAAIALPVLGGAGYVTTQRVQASICE
CCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEHHHHHHHHHH
LDLTKIGDGLPAVVQVHDPQCSLCVTLQRQTRRALRAYDDDSHHFLVANIVTTEGQYFAR
HHHHHCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHH
RHGVGNVTLVLLDGAGQQVGVVRGPLSNEALADAIAAHLGPVA
HCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKQRKKPSARRKGPSAPAPEATTTRRGALRHLRNAAIALPVLGGAGYVTTQRVQASICE
CCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEHHHHHHHHHH
LDLTKIGDGLPAVVQVHDPQCSLCVTLQRQTRRALRAYDDDSHHFLVANIVTTEGQYFAR
HHHHHCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHH
RHGVGNVTLVLLDGAGQQVGVVRGPLSNEALADAIAAHLGPVA
HCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA