| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053509
Identifier: 89053509
GI number: 89053509
Start: 972232
End: 972723
Strand: Reverse
Name: 89053509
Synonym: Jann_1018
Alternate gene names: NA
Gene position: 972723-972232 (Counterclockwise)
Preceding gene: 89053510
Following gene: 89053506
Centisome position: 22.53
GC content: 67.28
Gene sequence:
>492_bases ATGAAAAAACAACGCAAGAAACCAAGCGCCAGGCGCAAAGGCCCCTCCGCACCTGCGCCGGAGGCCACGACAACCCGCCG CGGGGCGCTGCGCCACCTGCGCAACGCGGCCATTGCTCTACCGGTTCTGGGGGGTGCGGGCTATGTCACCACCCAACGGG TCCAGGCCTCCATCTGCGAGCTGGACCTGACGAAAATCGGCGATGGCCTGCCCGCCGTGGTTCAGGTCCACGATCCCCAA TGCAGCCTCTGCGTGACCCTGCAACGCCAGACCCGGCGGGCTCTGCGGGCCTATGACGACGACAGCCACCACTTCCTCGT CGCCAATATCGTCACGACCGAGGGCCAGTATTTCGCCCGCCGCCACGGTGTGGGCAACGTCACCCTCGTGCTGCTGGATG GTGCCGGCCAACAGGTCGGCGTGGTCCGGGGGCCCCTGTCGAACGAGGCGCTGGCCGATGCCATCGCAGCCCATCTCGGC CCGGTCGCATAA
Upstream 100 bases:
>100_bases CTGATCTTCTGCCAAAGGGTCTGAGCCTCGCGTCCTTGTGATTGGTCGTCCAAGGCGCGCTGCCCCTAGGCTCTCAGCAA AAGATGCTCCGGGGGACACG
Downstream 100 bases:
>100_bases CATGTGCCGCAGAGCGTATCCCCACGGGACGGCGGGCGGGGCGTCTTTGGCCTTCAGGCCAAACAGCGTCGCCGCCGTCC CGAACCCTACCCGCAGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKKQRKKPSARRKGPSAPAPEATTTRRGALRHLRNAAIALPVLGGAGYVTTQRVQASICELDLTKIGDGLPAVVQVHDPQ CSLCVTLQRQTRRALRAYDDDSHHFLVANIVTTEGQYFARRHGVGNVTLVLLDGAGQQVGVVRGPLSNEALADAIAAHLG PVA
Sequences:
>Translated_163_residues MKKQRKKPSARRKGPSAPAPEATTTRRGALRHLRNAAIALPVLGGAGYVTTQRVQASICELDLTKIGDGLPAVVQVHDPQ CSLCVTLQRQTRRALRAYDDDSHHFLVANIVTTEGQYFARRHGVGNVTLVLLDGAGQQVGVVRGPLSNEALADAIAAHLG PVA >Mature_163_residues MKKQRKKPSARRKGPSAPAPEATTTRRGALRHLRNAAIALPVLGGAGYVTTQRVQASICELDLTKIGDGLPAVVQVHDPQ CSLCVTLQRQTRRALRAYDDDSHHFLVANIVTTEGQYFARRHGVGNVTLVLLDGAGQQVGVVRGPLSNEALADAIAAHLG PVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17356; Mature: 17356
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQRKKPSARRKGPSAPAPEATTTRRGALRHLRNAAIALPVLGGAGYVTTQRVQASICE CCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEHHHHHHHHHH LDLTKIGDGLPAVVQVHDPQCSLCVTLQRQTRRALRAYDDDSHHFLVANIVTTEGQYFAR HHHHHCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHH RHGVGNVTLVLLDGAGQQVGVVRGPLSNEALADAIAAHLGPVA HCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MKKQRKKPSARRKGPSAPAPEATTTRRGALRHLRNAAIALPVLGGAGYVTTQRVQASICE CCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEHHHHHHHHHH LDLTKIGDGLPAVVQVHDPQCSLCVTLQRQTRRALRAYDDDSHHFLVANIVTTEGQYFAR HHHHHCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHH RHGVGNVTLVLLDGAGQQVGVVRGPLSNEALADAIAAHLGPVA HCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA