| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053430
Identifier: 89053430
GI number: 89053430
Start: 895360
End: 895695
Strand: Reverse
Name: 89053430
Synonym: Jann_0939
Alternate gene names: NA
Gene position: 895695-895360 (Counterclockwise)
Preceding gene: 89053433
Following gene: 89053429
Centisome position: 20.74
GC content: 59.52
Gene sequence:
>336_bases ATGTTACTTACCCTTATGGCTAACAATCTTGACCACCTCTTCACCGCCCTCTCGGACCCGACGCGCCGCGCGGTCATCGC CCATCTCGGCGAAGGTGAGGCGCCAGTCAAAGCCCTCGCAACCCCCCACGATATGGCGCTGCCGAGCTTCCTGAAACATC TGGCGCAGCTGGAACGTGCGGGCCTTGTGACCTCTCGCAAAGTCGGCCGCACACGGATTTGCACCCTTCATCCAGAGGCG TTGGACACCGTGGACACGTGGCTTTCTCAACAACGCGCGCTTTGGGACGGCAAACTGGATCGACTTGAGACCTACCTGAA AAAGGACACCCCATGA
Upstream 100 bases:
>100_bases GGGGCGAGACTACCCCACCCCCTTGCGGCGCACCAGCACCCGGCTACCGGATCTTGTGGATAAAAAAGTTAGCCAGATGG CTATCTTTCAGGCGTCAACC
Downstream 100 bases:
>100_bases CGGACACCAAGACGCTCACCTTTTCTCGCACCCTGGCCGCAGATCCGGACCGGGTGGCGACGGCCCTGACCAACGCCGCG GCCCGGATGGAATGGGGCAC
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; ArsR Family Regulatory; Transcriptional Regulator TrmB; Transcription Regulator ArsR; Transcriptional Regulator Arsr Family; Transcriptional Regulator Protein; Regulatory Protein Arsr; Transcriptional Regulator Protein ArsR Family; Transcriptional Regulatory ArsR Family; MarR Family Transcriptional Regulator; ArsR Family Transcriptional Regulatory Protein; Arsr Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulatory Protein Asrr; Transcriptional Regulator Arsr Domain Protein; Transcriptional Regulator MarR Family; Transcriptional Regulatory Protein ArsR Family; Transcriptional Regulator ArsR-Family; Xin-Antitoxin System Antitoxin Component ArsR Family; HTH Family Transcriptional Regulator
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MLLTLMANNLDHLFTALSDPTRRAVIAHLGEGEAPVKALATPHDMALPSFLKHLAQLERAGLVTSRKVGRTRICTLHPEA LDTVDTWLSQQRALWDGKLDRLETYLKKDTP
Sequences:
>Translated_111_residues MLLTLMANNLDHLFTALSDPTRRAVIAHLGEGEAPVKALATPHDMALPSFLKHLAQLERAGLVTSRKVGRTRICTLHPEA LDTVDTWLSQQRALWDGKLDRLETYLKKDTP >Mature_111_residues MLLTLMANNLDHLFTALSDPTRRAVIAHLGEGEAPVKALATPHDMALPSFLKHLAQLERAGLVTSRKVGRTRICTLHPEA LDTVDTWLSQQRALWDGKLDRLETYLKKDTP
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12395; Mature: 12395
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTLMANNLDHLFTALSDPTRRAVIAHLGEGEAPVKALATPHDMALPSFLKHLAQLERA CEEEEECCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH GLVTSRKVGRTRICTLHPEALDTVDTWLSQQRALWDGKLDRLETYLKKDTP CCHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure MLLTLMANNLDHLFTALSDPTRRAVIAHLGEGEAPVKALATPHDMALPSFLKHLAQLERA CEEEEECCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH GLVTSRKVGRTRICTLHPEALDTVDTWLSQQRALWDGKLDRLETYLKKDTP CCHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA