| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yqeB [C]
Identifier: 89053426
GI number: 89053426
Start: 890097
End: 890867
Strand: Reverse
Name: yqeB [C]
Synonym: Jann_0935
Alternate gene names: 89053426
Gene position: 890867-890097 (Counterclockwise)
Preceding gene: 89053427
Following gene: 89053425
Centisome position: 20.63
GC content: 60.7
Gene sequence:
>771_bases ATGACCGCGATCCGCGTGACCATCACGCAGGTCAAAGGCTCCGCACCGCGCGACACGGGCACGTCGATGCTGGTCTTTGC GGACCGGATCGAAGGCACAATTGGCGGCGGCGCGTTGGAGTGGGAGGCCATGCGCCTCGCCCGCGATATGCTGCGGAATG GCACGTCAGTCACGACCCACACTTTTCCCCTCGGCCCAGCCTTGGGGCAGTGCTGCGGCGGTGTTGTAAAACTTGAGCTT CAGGCCGCAACCCAATGGAAAGGGGTCGAAAAGACGCCCATCTGGATCTGGGGTGCCGGTCATGTCGGTCGCGCTATTAT CCACACTTTATCCCCATTTTCGGCTCTGGACCTGTCTTGGATCGACACGGCGGCAGATCGTTTTCCCGCAGATATCCCCA ATGATACCCACAGGTTGATCGCGACGGATCCGCCCCGCCTCATGCCCCACGCCCCACCCAACGCACATCACCTCATTGCG ACCTACTCCCATGACATCGACCTTGCGCTCTGCCATGCCGCCCTCACCCACGGTTTTGCCAGCGCCGGTGTTATCGGCTC CGCCACCAAATGGGCTCGGTTCCGCAAACGCCTTGGGCAGATGGGCCATTCCGGCGCTCAGATCTCCCGCATCATGTGTC CCATTGGTGACCCCGGCCTTGGCAAACATCCCCAAGCCATTGCGATTGGCGTGGCCGCACGGCTACTTGGTGAACAAATG CTGCAAGAATCAGCACAACATCTGAAAGACGTGGATCATGGGGGGACATGA
Upstream 100 bases:
>100_bases CCCTCGGGCATGCCTGTGCCGCTGCCGGTTCCACCTTCCCTGACCTGCAAGCCCCGGCCACCGCAGAAGCGGTCTTGGCC GCCGTGGGTCGCGCCCGATC
Downstream 100 bases:
>100_bases CCGCACCGCTGCTTAATATCCAGGGGCTGACCAAGGCCTACCCCGGCGTTGTGGCGAACGACGCCGTGTCCTTCGTCATC CAACCGGGCGAAGTTCATGC
Product: molybdenum cofactor sulfurylase
Products: NA
Alternate protein names: Molybdenum Cofactor Sulfurylase; Xanthine Dehydrogenase Accessory Factor; Xanthine And Co Dehydrogenase Maturation Factor; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine Dehydrogenase Protein; Xanthine Dehydrogenase Accessory Protein; Adenosine Deaminase; Xanthine Dehydrogenase Cofactor Insertion; Xanthine Dehydrogenase Accessory Protein Xdhc; Dehydrogenase Accessory Protein; XdhC Protein; Xanthine And CO Dehydrogenases Maturation Factor; Xanthine Dehydrogenase; Dehydrogenase; Xanthine Dehydrogenase Accessory Factor X; Xanthine Dehydrogenase Xdh C Protein; XANTHINE DEHYDROGENASE Accessory Component; Xanthine Dehydrogenase XdhC; Xanthine Dehydrogenase Chaperone; Xanthine Dehydrogenase Maturation Factor; Xanthine/CO Dehydrogenase Maturation Protein; Xanthine Dehydrogenase Protein C Subunit
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTAIRVTITQVKGSAPRDTGTSMLVFADRIEGTIGGGALEWEAMRLARDMLRNGTSVTTHTFPLGPALGQCCGGVVKLEL QAATQWKGVEKTPIWIWGAGHVGRAIIHTLSPFSALDLSWIDTAADRFPADIPNDTHRLIATDPPRLMPHAPPNAHHLIA TYSHDIDLALCHAALTHGFASAGVIGSATKWARFRKRLGQMGHSGAQISRIMCPIGDPGLGKHPQAIAIGVAARLLGEQM LQESAQHLKDVDHGGT
Sequences:
>Translated_256_residues MTAIRVTITQVKGSAPRDTGTSMLVFADRIEGTIGGGALEWEAMRLARDMLRNGTSVTTHTFPLGPALGQCCGGVVKLEL QAATQWKGVEKTPIWIWGAGHVGRAIIHTLSPFSALDLSWIDTAADRFPADIPNDTHRLIATDPPRLMPHAPPNAHHLIA TYSHDIDLALCHAALTHGFASAGVIGSATKWARFRKRLGQMGHSGAQISRIMCPIGDPGLGKHPQAIAIGVAARLLGEQM LQESAQHLKDVDHGGT >Mature_255_residues TAIRVTITQVKGSAPRDTGTSMLVFADRIEGTIGGGALEWEAMRLARDMLRNGTSVTTHTFPLGPALGQCCGGVVKLELQ AATQWKGVEKTPIWIWGAGHVGRAIIHTLSPFSALDLSWIDTAADRFPADIPNDTHRLIATDPPRLMPHAPPNAHHLIAT YSHDIDLALCHAALTHGFASAGVIGSATKWARFRKRLGQMGHSGAQISRIMCPIGDPGLGKHPQAIAIGVAARLLGEQML QESAQHLKDVDHGGT
Specific function: Unknown
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27310; Mature: 27179
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIRVTITQVKGSAPRDTGTSMLVFADRIEGTIGGGALEWEAMRLARDMLRNGTSVTTH CCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE TFPLGPALGQCCGGVVKLELQAATQWKGVEKTPIWIWGAGHVGRAIIHTLSPFSALDLSW ECCCCHHHHHHCCCEEEEEEEEHHHCCCCCCCCEEEEECCHHHHHHHHHCCCCHHCCHHH IDTAADRFPADIPNDTHRLIATDPPRLMPHAPPNAHHLIATYSHDIDLALCHAALTHGFA HHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCHH SAGVIGSATKWARFRKRLGQMGHSGAQISRIMCPIGDPGLGKHPQAIAIGVAARLLGEQM HCCCCCCHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH LQESAQHLKDVDHGGT HHHHHHHHHHHCCCCC >Mature Secondary Structure TAIRVTITQVKGSAPRDTGTSMLVFADRIEGTIGGGALEWEAMRLARDMLRNGTSVTTH CEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE TFPLGPALGQCCGGVVKLELQAATQWKGVEKTPIWIWGAGHVGRAIIHTLSPFSALDLSW ECCCCHHHHHHCCCEEEEEEEEHHHCCCCCCCCEEEEECCHHHHHHHHHCCCCHHCCHHH IDTAADRFPADIPNDTHRLIATDPPRLMPHAPPNAHHLIATYSHDIDLALCHAALTHGFA HHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCHH SAGVIGSATKWARFRKRLGQMGHSGAQISRIMCPIGDPGLGKHPQAIAIGVAARLLGEQM HCCCCCCHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH LQESAQHLKDVDHGGT HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA