Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053411

Identifier: 89053411

GI number: 89053411

Start: 877237

End: 877701

Strand: Reverse

Name: 89053411

Synonym: Jann_0920

Alternate gene names: NA

Gene position: 877701-877237 (Counterclockwise)

Preceding gene: 89053413

Following gene: 89053409

Centisome position: 20.33

GC content: 65.59

Gene sequence:

>465_bases
ATGCGCAAAATAGCCTTCCTTACCGCCACCCTCACCCTTCTTGCCGCCCCGGTCGTCGCCCAGTCCGAGCTGGATCGGCT
GGAAACCGCTACTGTTGCTGCCGGGGGCAACCTGGAGGCCTTCCTGACCTCCCGCGCGCCCGAACTGGCCTCCGCCATGC
CCGACTGGAGTTGGGATGCGGAGTTGCGCGCCGCCGCGACCTGCACCCTCGATGCCATGCGGTCCGAGGGGGGGGATGCT
GCCGTCACCGAATACCTCGACGCGATGGAAGAATTCGCCACAACCCCGATCACGTCCATGGAGCAGATGGCCACCGCAAC
GCCCGTCCCGATCAGCACCGATTTCGCCGCCCGCACCGGTCAGGACTGCGGATCTGCGGAAATCGCCATGCGCCGGATGC
AGGAAAGCGGCCTGATGCAGGCGATGATGGATCCCGCCATCATGGGTCGCCTGATGGGCCAATAA

Upstream 100 bases:

>100_bases
ACGCATCCCAGGCGCGGTCCACTAGGGTTTTCCTGTCCTTGGCACGGGCGCACATCCCCGGCATTCTGGCGCGAGATTTC
ACCCTCACAGGATGTATGCC

Downstream 100 bases:

>100_bases
CGCGGCGCGACCAATCGCCAGACCTGCGGGACGGTGGGAGGGGCGAGGTCGGCGGTTTTTGCCTGGCAAAAATCGTCGAT
CAGCGTCTCCCCCGGTCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRKIAFLTATLTLLAAPVVAQSELDRLETATVAAGGNLEAFLTSRAPELASAMPDWSWDAELRAAATCTLDAMRSEGGDA
AVTEYLDAMEEFATTPITSMEQMATATPVPISTDFAARTGQDCGSAEIAMRRMQESGLMQAMMDPAIMGRLMGQ

Sequences:

>Translated_154_residues
MRKIAFLTATLTLLAAPVVAQSELDRLETATVAAGGNLEAFLTSRAPELASAMPDWSWDAELRAAATCTLDAMRSEGGDA
AVTEYLDAMEEFATTPITSMEQMATATPVPISTDFAARTGQDCGSAEIAMRRMQESGLMQAMMDPAIMGRLMGQ
>Mature_154_residues
MRKIAFLTATLTLLAAPVVAQSELDRLETATVAAGGNLEAFLTSRAPELASAMPDWSWDAELRAAATCTLDAMRSEGGDA
AVTEYLDAMEEFATTPITSMEQMATATPVPISTDFAARTGQDCGSAEIAMRRMQESGLMQAMMDPAIMGRLMGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16358; Mature: 16358

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
8.4 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
8.4 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIAFLTATLTLLAAPVVAQSELDRLETATVAAGGNLEAFLTSRAPELASAMPDWSWDA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHCCCCCCCC
ELRAAATCTLDAMRSEGGDAAVTEYLDAMEEFATTPITSMEQMATATPVPISTDFAARTG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHCC
QDCGSAEIAMRRMQESGLMQAMMDPAIMGRLMGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKIAFLTATLTLLAAPVVAQSELDRLETATVAAGGNLEAFLTSRAPELASAMPDWSWDA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHCCCCCCCC
ELRAAATCTLDAMRSEGGDAAVTEYLDAMEEFATTPITSMEQMATATPVPISTDFAARTG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHCC
QDCGSAEIAMRRMQESGLMQAMMDPAIMGRLMGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA