| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053394
Identifier: 89053394
GI number: 89053394
Start: 859542
End: 860225
Strand: Reverse
Name: 89053394
Synonym: Jann_0903
Alternate gene names: NA
Gene position: 860225-859542 (Counterclockwise)
Preceding gene: 89053395
Following gene: 89053393
Centisome position: 19.92
GC content: 64.04
Gene sequence:
>684_bases ATGACCTATGATCTTCTTATCGGACAGCAATCCTATTCCAGCTGGTCCCTACGCGCCTGGCTGGCATTCGCCCCCTTCGA CATCCCCACCACGCTCCACAAGGTGGAGATCTATGGAGACACCTTCTACGACGACGTCGCGGCCTTTGGCGCAGTGCGCA CCGTCCCCGCCGTTCGCACGCCCGAAGGTGGAATGCTGTCGGACAGTATCGCGATTGCCTGGCATGTGGCGGACGCATTC CCGGATCGCGGCGTGATGCCGTCGGACCCGGTCCAGCGGGCCGAGGCGATGTCGATCATCGCTGAGATGCACGACGGCTT CACCGCCCTGCGCGGCGCGTGCCCCGTCAACCTGCGCACTGCCTGGGCCGGGTTCGAGCCGTCCGAGGGCGTTCTGGCTG ACGTCGCCCGGTTTGAAGAGGTTATGGCGCGCGCCATCAACCGCTCTGGCGGGCCGTTTCTTTACGGCACCTTCACCCTG GCCGATGCCTTTTACGCCCCTCTCGCCACGCGGCTTCTGACCTATGGCTTGCCGATGTCCAGCACGGCGCAGGCCTATGC CAAGGCGATTGTCACCCATCCGTCCTTCGTGGATTGGCGCAACGCGGGCATGGAAGAAACGCAAGAGATCGCGCGCTATG ACAAAGCGCCGTTGGAGCGGGTGCCGTTCCCGACCTTTGCCTAG
Upstream 100 bases:
>100_bases AATCACTGCCCCTGATCGGTGGCCCCAAATCACTGGCCCTGATCACCTCCATCACGGCCTTTCAATTGACGTCCGCCTTA CCGCAGCCCTAACTGCCGCC
Downstream 100 bases:
>100_bases GACTTTCCAATTTTATTAAGACCCGCCCCATTCTGTTAACCTTTCGCTAACCCTTCATCAGACAGGGTGAGCGCCATGTT TGAAGCCACCAGTCCAGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTYDLLIGQQSYSSWSLRAWLAFAPFDIPTTLHKVEIYGDTFYDDVAAFGAVRTVPAVRTPEGGMLSDSIAIAWHVADAF PDRGVMPSDPVQRAEAMSIIAEMHDGFTALRGACPVNLRTAWAGFEPSEGVLADVARFEEVMARAINRSGGPFLYGTFTL ADAFYAPLATRLLTYGLPMSSTAQAYAKAIVTHPSFVDWRNAGMEETQEIARYDKAPLERVPFPTFA
Sequences:
>Translated_227_residues MTYDLLIGQQSYSSWSLRAWLAFAPFDIPTTLHKVEIYGDTFYDDVAAFGAVRTVPAVRTPEGGMLSDSIAIAWHVADAF PDRGVMPSDPVQRAEAMSIIAEMHDGFTALRGACPVNLRTAWAGFEPSEGVLADVARFEEVMARAINRSGGPFLYGTFTL ADAFYAPLATRLLTYGLPMSSTAQAYAKAIVTHPSFVDWRNAGMEETQEIARYDKAPLERVPFPTFA >Mature_226_residues TYDLLIGQQSYSSWSLRAWLAFAPFDIPTTLHKVEIYGDTFYDDVAAFGAVRTVPAVRTPEGGMLSDSIAIAWHVADAFP DRGVMPSDPVQRAEAMSIIAEMHDGFTALRGACPVNLRTAWAGFEPSEGVLADVARFEEVMARAINRSGGPFLYGTFTLA DAFYAPLATRLLTYGLPMSSTAQAYAKAIVTHPSFVDWRNAGMEETQEIARYDKAPLERVPFPTFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24899; Mature: 24768
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYDLLIGQQSYSSWSLRAWLAFAPFDIPTTLHKVEIYGDTFYDDVAAFGAVRTVPAVRT CCEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCC PEGGMLSDSIAIAWHVADAFPDRGVMPSDPVQRAEAMSIIAEMHDGFTALRGACPVNLRT CCCCCCCCCEEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEE AWAGFEPSEGVLADVARFEEVMARAINRSGGPFLYGTFTLADAFYAPLATRLLTYGLPMS EECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCC STAQAYAKAIVTHPSFVDWRNAGMEETQEIARYDKAPLERVPFPTFA HHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHCCCCHHHCCCCCCC >Mature Secondary Structure TYDLLIGQQSYSSWSLRAWLAFAPFDIPTTLHKVEIYGDTFYDDVAAFGAVRTVPAVRT CEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCC PEGGMLSDSIAIAWHVADAFPDRGVMPSDPVQRAEAMSIIAEMHDGFTALRGACPVNLRT CCCCCCCCCEEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEE AWAGFEPSEGVLADVARFEEVMARAINRSGGPFLYGTFTLADAFYAPLATRLLTYGLPMS EECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCC STAQAYAKAIVTHPSFVDWRNAGMEETQEIARYDKAPLERVPFPTFA HHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA