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The map label for this gene is comM [H]

Identifier: 89053393

GI number: 89053393

Start: 857925

End: 859466

Strand: Reverse

Name: comM [H]

Synonym: Jann_0902

Alternate gene names: 89053393

Gene position: 859466-857925 (Counterclockwise)

Preceding gene: 89053394

Following gene: 89053389

Centisome position: 19.9

GC content: 66.47

Gene sequence:

>1542_bases
ATGTTTGAAGCCACCAGTCCAGACGCCCTCGCCCTCACCCATACCGTCGCGTTTGAGGGCCTTGATGCCCGCCGCGTGGA
AGTGCAATGCGCCGTCACGGCGGGCCTGCCGGGCTTTGCCATCGTGGGCCTGCCCGACAAGGCCGTGTCCGAGGCGCGCG
AGAGGGTGCGCACCGCCCTGCAGGCCATGGCCATCGCGCTGCCGTCGCGCCGGATCACGGTGAACCTGTCGCCCGCTGAC
ATTCCCAAAGAGGGCTCTCACTTCGACCTGCCCATCGCTCTGGCTTTGCTGGCGGCCTTGGGGATCTTGCCGAAAGAGCG
CGTGGAAGGCACGCTGTCGCTGGGTGAATTGTCCTTGAACGGGCGCCTGGTGCCGGTTCTTGGCGCATTGCCCGCAGCCC
TCGCAGCGGGGGAGGACAACCGCACGCTACTGTGTCCATCCGGATGCGGGGCGGAGGCGGCTTGGGTGGGCGCGACACCC
GTATTCGCCGCTGCGTCGCTTGGTGATTTGATCGCACATCTGACCGACCGCGCACCGTTGGAGCCCGCGTCACCCGGAGA
AGTCGCCGCCGACCCAGGTCCCAAATGCATGTCAGAGGTCCGGGGGCAGGAACGGGCCAAACGGGCGCTGGAGATCGCGG
CGGCCGGACGGCACCACCTTATGATGGTGGGCTCTCCGGGGTCCGGCAAGTCGATGCTGGCGGCGCGATTGCCGGGGATT
CTGCCCGCGTTATCCGCGGCGGAGGCGTTAGAGACGTCGATGATCCACTCTCTGTCGGGTCTTTTGGACGAGGGTGGGAT
TTCCCGCACGCGACCCTACCGCGCCCCGCATCATACGGCATCGATGCCTGCGATTGTGGGCGGTGGTCGCGGCGCGAAAC
CCGGTGAGATCAGTCTGGCGCATAACGGCGTGCTGTTTCTGGATGAGCTGCCTGAATATCCGCGCGCCGTGTTGGAGACC
CTGCGCCAACCGATTGAGACGGGCGATGTCGTCGTCGCCCGCGCCAACGCCCATGTGACCTATCCCTGCCGGTTTCTTCT
GATCGCCGCCGCCAATCCCTGCCGGTGCGGGAACCTGTATGATGCCGATGCTGCCTGCAATCGCGCGCCGATCTGCGGGC
AGGATTATATGGGAAAGATCTCAGGACCCTTGATGGACCGGTTTGATCTGCGGCTGGAGGTGCCGCCTGTTGCCTATTCG
GACCTCGACCTGCCCGCCTCCGGCGAGACCAGCACCGTGATCGCCGCGCGTGTCGCGCAGGCGCGCGACGTGCAGGCGGC
TCGCTTTTCCGCCCTGGGGGCGTCAGCGCGGGTGAATGCCGATGCGGAAGGCGCGCTGCTGGATCAGATCGCGACACCCG
ATAGCGAGGGCAAGGCGATGCTGCTGCAAGCGGCGGACAAGTTCAAACTGACCGCACGCGGGTATCACCGCGTCCTGCGA
CTGGCGCGCACCATTGCCGATCTGGATGGGGTGGAGACGGTCAGCGTGCCCCATATCGCCGAGGCGGTGGGGTATCGGCT
GATCGGTGCGCGCGACGTCTAG

Upstream 100 bases:

>100_bases
GGTGCCGTTCCCGACCTTTGCCTAGGACTTTCCAATTTTATTAAGACCCGCCCCATTCTGTTAACCTTTCGCTAACCCTT
CATCAGACAGGGTGAGCGCC

Downstream 100 bases:

>100_bases
GGCATCGCCGCGTGGCGGTCCTCGATGGCGTCCCAGATCCGGGCGGCGATGTTGACGCCGTCAAACCGCTCCAATTCCTG
AATGCCGGTGGGTGAGGTCA

Product: Mg chelatase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MFEATSPDALALTHTVAFEGLDARRVEVQCAVTAGLPGFAIVGLPDKAVSEARERVRTALQAMAIALPSRRITVNLSPAD
IPKEGSHFDLPIALALLAALGILPKERVEGTLSLGELSLNGRLVPVLGALPAALAAGEDNRTLLCPSGCGAEAAWVGATP
VFAAASLGDLIAHLTDRAPLEPASPGEVAADPGPKCMSEVRGQERAKRALEIAAAGRHHLMMVGSPGSGKSMLAARLPGI
LPALSAAEALETSMIHSLSGLLDEGGISRTRPYRAPHHTASMPAIVGGGRGAKPGEISLAHNGVLFLDELPEYPRAVLET
LRQPIETGDVVVARANAHVTYPCRFLLIAAANPCRCGNLYDADAACNRAPICGQDYMGKISGPLMDRFDLRLEVPPVAYS
DLDLPASGETSTVIAARVAQARDVQAARFSALGASARVNADAEGALLDQIATPDSEGKAMLLQAADKFKLTARGYHRVLR
LARTIADLDGVETVSVPHIAEAVGYRLIGARDV

Sequences:

>Translated_513_residues
MFEATSPDALALTHTVAFEGLDARRVEVQCAVTAGLPGFAIVGLPDKAVSEARERVRTALQAMAIALPSRRITVNLSPAD
IPKEGSHFDLPIALALLAALGILPKERVEGTLSLGELSLNGRLVPVLGALPAALAAGEDNRTLLCPSGCGAEAAWVGATP
VFAAASLGDLIAHLTDRAPLEPASPGEVAADPGPKCMSEVRGQERAKRALEIAAAGRHHLMMVGSPGSGKSMLAARLPGI
LPALSAAEALETSMIHSLSGLLDEGGISRTRPYRAPHHTASMPAIVGGGRGAKPGEISLAHNGVLFLDELPEYPRAVLET
LRQPIETGDVVVARANAHVTYPCRFLLIAAANPCRCGNLYDADAACNRAPICGQDYMGKISGPLMDRFDLRLEVPPVAYS
DLDLPASGETSTVIAARVAQARDVQAARFSALGASARVNADAEGALLDQIATPDSEGKAMLLQAADKFKLTARGYHRVLR
LARTIADLDGVETVSVPHIAEAVGYRLIGARDV
>Mature_513_residues
MFEATSPDALALTHTVAFEGLDARRVEVQCAVTAGLPGFAIVGLPDKAVSEARERVRTALQAMAIALPSRRITVNLSPAD
IPKEGSHFDLPIALALLAALGILPKERVEGTLSLGELSLNGRLVPVLGALPAALAAGEDNRTLLCPSGCGAEAAWVGATP
VFAAASLGDLIAHLTDRAPLEPASPGEVAADPGPKCMSEVRGQERAKRALEIAAAGRHHLMMVGSPGSGKSMLAARLPGI
LPALSAAEALETSMIHSLSGLLDEGGISRTRPYRAPHHTASMPAIVGGGRGAKPGEISLAHNGVLFLDELPEYPRAVLET
LRQPIETGDVVVARANAHVTYPCRFLLIAAANPCRCGNLYDADAACNRAPICGQDYMGKISGPLMDRFDLRLEVPPVAYS
DLDLPASGETSTVIAARVAQARDVQAARFSALGASARVNADAEGALLDQIATPDSEGKAMLLQAADKFKLTARGYHRVLR
LARTIADLDGVETVSVPHIAEAVGYRLIGARDV

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=503, Percent_Identity=40.9542743538767, Blast_Score=357, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 53477; Mature: 53477

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEATSPDALALTHTVAFEGLDARRVEVQCAVTAGLPGFAIVGLPDKAVSEARERVRTAL
CCCCCCCCCEEEEEEHHHCCCCCEEEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHH
QAMAIALPSRRITVNLSPADIPKEGSHFDLPIALALLAALGILPKERVEGTLSLGELSLN
HHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCEEEEEEEEEC
GRLVPVLGALPAALAAGEDNRTLLCPSGCGAEAAWVGATPVFAAASLGDLIAHLTDRAPL
CEEEHHHHHHHHHHHCCCCCCEEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCC
EPASPGEVAADPGPKCMSEVRGQERAKRALEIAAAGRHHLMMVGSPGSGKSMLAARLPGI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCH
LPALSAAEALETSMIHSLSGLLDEGGISRTRPYRAPHHTASMPAIVGGGRGAKPGEISLA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEE
HNGVLFLDELPEYPRAVLETLRQPIETGDVVVARANAHVTYPCRFLLIAAANPCRCGNLY
CCCEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEECCEEEEEEECCCCCCCCCCC
DADAACNRAPICGQDYMGKISGPLMDRFDLRLEVPPVAYSDLDLPASGETSTVIAARVAQ
CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
ARDVQAARFSALGASARVNADAEGALLDQIATPDSEGKAMLLQAADKFKLTARGYHRVLR
HHHHHHHHHHHCCCCCEECCCCCCHHHHHHCCCCCCCCEEEEECCCHHEEHHHHHHHHHH
LARTIADLDGVETVSVPHIAEAVGYRLIGARDV
HHHHHHHCCCCCEECCCHHHHHHCEEEECCCCC
>Mature Secondary Structure
MFEATSPDALALTHTVAFEGLDARRVEVQCAVTAGLPGFAIVGLPDKAVSEARERVRTAL
CCCCCCCCCEEEEEEHHHCCCCCEEEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHH
QAMAIALPSRRITVNLSPADIPKEGSHFDLPIALALLAALGILPKERVEGTLSLGELSLN
HHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCEEEEEEEEEC
GRLVPVLGALPAALAAGEDNRTLLCPSGCGAEAAWVGATPVFAAASLGDLIAHLTDRAPL
CEEEHHHHHHHHHHHCCCCCCEEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCC
EPASPGEVAADPGPKCMSEVRGQERAKRALEIAAAGRHHLMMVGSPGSGKSMLAARLPGI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCH
LPALSAAEALETSMIHSLSGLLDEGGISRTRPYRAPHHTASMPAIVGGGRGAKPGEISLA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEE
HNGVLFLDELPEYPRAVLETLRQPIETGDVVVARANAHVTYPCRFLLIAAANPCRCGNLY
CCCEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEECCEEEEEEECCCCCCCCCCC
DADAACNRAPICGQDYMGKISGPLMDRFDLRLEVPPVAYSDLDLPASGETSTVIAARVAQ
CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
ARDVQAARFSALGASARVNADAEGALLDQIATPDSEGKAMLLQAADKFKLTARGYHRVLR
HHHHHHHHHHHCCCCCEECCCCCCHHHHHHCCCCCCCCEEEEECCCHHEEHHHHHHHHHH
LARTIADLDGVETVSVPHIAEAVGYRLIGARDV
HHHHHHHCCCCCEECCCHHHHHHCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]