| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is glnD [H]
Identifier: 89053388
GI number: 89053388
Start: 851551
End: 854295
Strand: Reverse
Name: glnD [H]
Synonym: Jann_0897
Alternate gene names: 89053388
Gene position: 854295-851551 (Counterclockwise)
Preceding gene: 89053389
Following gene: 89053387
Centisome position: 19.78
GC content: 63.24
Gene sequence:
>2745_bases TTGTTGTTGCCCAATGAGGACATCATTGACAGACCGGCTCTGGCCGCACGGCTGGATGCCGTCTGCGCCCAGGCCACCGA TGCCGCCGCGATCCGGGCGGCCACCGTCACCGAATTGTCCCGCGCCCAAGGCACCGCGCGTGATGCGCTGGCCCGTGCGA TCACCGCCAGCCCCCTTGCCGCGCGCCGGGCCACGCGGTCCTATGCCTTCCTGACCGATGTGCTTGTCACCGAAGTGCTG CGTGTTGCGCAGACCTACATCCACCCCACCAATATCCAGTCCGAGAGCGAGCGCATCGCGGTCCTTGCCGTGGGCGGCTA CGGGCGCGCGGAAATGGCCCCGTCCTCCGACGTGGACCTGCTGTTCCTGACGCCGTGGAAAGTCACCGGCAAGATCGAGA GCATCATTGAAAGCACGCTCTACATGCTGTGGGACCTGCGCCTGAAGGTCGGCCACTCGTCGCGCACGATCAAGGATTGC CTGCGTCTGGGCCGGGACGACTACACGATCCGCACCACCTTTCTGGAAATGCGCCACCTCAGCGGCGATGCCGCCCTGTC GGCTGAGTTGCATGACACATTGCGTGCGCAACTGTTCACCGGCACCACGGGCGAGTTCGTGGAAGCCAAGCTGGAAGAAC GCGCCAACCGCCACAAAAAGCAGGGCGGCCAACGCTATATGCTGGAGCCCAATGTCAAAGAGGGCAAAGGCGGCCTGCGC GACCTGCAAACCCTATATTGGATCGCCAAATATGAACACGGCGTGGAGAAGGCCGGGGAGCTGGTGGCCCTCAACGTCTT CCGGCCCGAGGAATTCGCCGCCTTTGACGCAGCCGAACGCTTCGTGTGGGCCGTCCGCTGTCATCTGCACCTGATCGCCG GGCGCGCCCAGGACATGCTGTCGTTTGATATGCAGGTCGAGGTGGCCGACCGTCTCGGATATGACGACCATTCCGGCCGC CGTGCGGTGGAACATTTCATGCAGGATTACTTCCGGCACGCCACCCAGGTCGGCGAACTGACCCGCATCTTCCTGACGGG GCTGGAGGCGCGCCACGTCAAACAGGAACCCGCAATCCTTGGCTTTCTGCGCGGGCGCACGCGGCGCAAGAAGCTGAAAG ACGGCTACGCGGTGGCCCAGAACCGCCTCAACATCACGGACCCGGAGGCCTTCTTCACCGATCCCCTCAACATTCTGCGC CTGTTTGAAGAGGGTCTGCGCACCAACTACCTAATCCACCCCGACGCCATGCGCGAAGCCTCCGCCCGGCTGGATCTGAT CGACGACACCATGCGCCGCGACCGCGAAGCCAACCGCATCTTCCTTGACCTGATGCTGAAGCACGGCAACCCGGAACGCG GCCTGCGCCGGATGAACGAACTTGGGGTTCTGGCGGCGTTCCTGCCGGAATTCGCCCATATCGTAGCGATGATGCAGTTC AACATGTACCACAGCTATACGGTGGACGAGCATACGATCCAGGTCATCTCCACCCTCGCGCAGATCGAGCGGGGGGAATT GGTGGAGGAACTGCCCCTCGTCTCTGGCATCCTGAAAAACGGTGTGAACCGCAAGGTCCTGTTCGTCGCCTGCCTGCTGC ACGATATCGGCAAGGGCCGGAACGAGGATCACTCCATTCTGGGCGCGCGGATGGCCCGCGCAATCTGCCCCCGTCTGGGC CTGAAACCGGCGGAATGTGAGACCGTCGAATGGCTCGTCCGCTACCACCTTCTGATGTCCGACATGGCCCAGAAGCGCGA CATCGCCGACCCCCGCACCGTGCGCGACTTTGCCAAGGCCGTGAAAACCCGCGAACGGCTGGACCTGCTGACCGTCCTGA CGGTCTGTGACATCCGCGGCGTGGGGCCAAATACGTGGAACAACTGGAAGGCGACGCTTCTGCGCTCGCTCCACCGCTCC ACCGCCATGGCGCTGGAAACCGGGCTGGAGGACCTCAACCGCGAACAATTGGAGGGGGAGGCCAAGAAACGCCTGCGCGC CGCTCTGACAAGCTGGTCCAAGGGCGACATCAAGACCGAGGTGGACCGCCATTACGGCCCCTATTGGCAGGGCCTCGATC TGGCCACTCAGGTCACCTTCGCCAAGATGCTCGGCGGCCTGAAAGACGATGAAATCAAGATCGACACCAAGCAGGACACG GACCGTGACGCCACGCGGGTCTGCTTTGCCTTGGCCGATCACCCCGGCATCCTGACGCGCCTTGCGGGCGCTCTCTCGCT GGTCGGCGCCAATGTTGTGGATGCGCGGACCTACACGTCCAAGGACGGCTATGCGACCGCCGTGTTCTGGGTGCAGGACC GCGAAGGATCGCCCTATGAAAAGGCCCGCCTGCCGCGCCTGACAACGATGATCCGCAAGACACTGATGGGCGAGGTCGTC GCGTCAGAGGCGATGGAGAAACGCGACAAGATCAAAAAACGCGAGCGGCCCTTCAACGTGCCGACAACAATCACCTTCGA CAATGAGGGATCGGAGATCTACACGATCATCGAGGTTGATACCCGCGACCGCCCCGGCCTGCTCTATGATCTGGCCAAAT GTCTTGCGGCGGCCAATGTCTACATCTCGTCCGCCACCATCGCGACTTACGGCGTGCAGGTTGTGGACACGTTCTACGTC AAGGACACCTTCGGGCTGAAACTGCATTCCGAGCCGCGCCGCGCCGCCTTGGAGCGCAAGCTGCGGGACGCCATCGCCCG GGTTGCCGAACGGGCCGGGGCATGA
Upstream 100 bases:
>100_bases CAGGTGAGTGTCATTGACCCTGCCCCAAGACGCCTCGGCGGTCCCGGTCTCTGACCGGGCGCAAAACCCCAGCCTCTCCG CCGCATCCTCGCCGGGCACA
Downstream 100 bases:
>100_bases CCGAGACCGACCCGTTCCACGTCCCGCCCCCGCCGGAGCGCCCCACCCCCAAACCCATCCGGGCCCTGCGCGGGTTCTTC ACGGTGGGGTTCTGGACCAT
Product: PII uridylyl-transferase
Products: NA
Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]
Number of amino acids: Translated: 914; Mature: 914
Protein sequence:
>914_residues MLLPNEDIIDRPALAARLDAVCAQATDAAAIRAATVTELSRAQGTARDALARAITASPLAARRATRSYAFLTDVLVTEVL RVAQTYIHPTNIQSESERIAVLAVGGYGRAEMAPSSDVDLLFLTPWKVTGKIESIIESTLYMLWDLRLKVGHSSRTIKDC LRLGRDDYTIRTTFLEMRHLSGDAALSAELHDTLRAQLFTGTTGEFVEAKLEERANRHKKQGGQRYMLEPNVKEGKGGLR DLQTLYWIAKYEHGVEKAGELVALNVFRPEEFAAFDAAERFVWAVRCHLHLIAGRAQDMLSFDMQVEVADRLGYDDHSGR RAVEHFMQDYFRHATQVGELTRIFLTGLEARHVKQEPAILGFLRGRTRRKKLKDGYAVAQNRLNITDPEAFFTDPLNILR LFEEGLRTNYLIHPDAMREASARLDLIDDTMRRDREANRIFLDLMLKHGNPERGLRRMNELGVLAAFLPEFAHIVAMMQF NMYHSYTVDEHTIQVISTLAQIERGELVEELPLVSGILKNGVNRKVLFVACLLHDIGKGRNEDHSILGARMARAICPRLG LKPAECETVEWLVRYHLLMSDMAQKRDIADPRTVRDFAKAVKTRERLDLLTVLTVCDIRGVGPNTWNNWKATLLRSLHRS TAMALETGLEDLNREQLEGEAKKRLRAALTSWSKGDIKTEVDRHYGPYWQGLDLATQVTFAKMLGGLKDDEIKIDTKQDT DRDATRVCFALADHPGILTRLAGALSLVGANVVDARTYTSKDGYATAVFWVQDREGSPYEKARLPRLTTMIRKTLMGEVV ASEAMEKRDKIKKRERPFNVPTTITFDNEGSEIYTIIEVDTRDRPGLLYDLAKCLAAANVYISSATIATYGVQVVDTFYV KDTFGLKLHSEPRRAALERKLRDAIARVAERAGA
Sequences:
>Translated_914_residues MLLPNEDIIDRPALAARLDAVCAQATDAAAIRAATVTELSRAQGTARDALARAITASPLAARRATRSYAFLTDVLVTEVL RVAQTYIHPTNIQSESERIAVLAVGGYGRAEMAPSSDVDLLFLTPWKVTGKIESIIESTLYMLWDLRLKVGHSSRTIKDC LRLGRDDYTIRTTFLEMRHLSGDAALSAELHDTLRAQLFTGTTGEFVEAKLEERANRHKKQGGQRYMLEPNVKEGKGGLR DLQTLYWIAKYEHGVEKAGELVALNVFRPEEFAAFDAAERFVWAVRCHLHLIAGRAQDMLSFDMQVEVADRLGYDDHSGR RAVEHFMQDYFRHATQVGELTRIFLTGLEARHVKQEPAILGFLRGRTRRKKLKDGYAVAQNRLNITDPEAFFTDPLNILR LFEEGLRTNYLIHPDAMREASARLDLIDDTMRRDREANRIFLDLMLKHGNPERGLRRMNELGVLAAFLPEFAHIVAMMQF NMYHSYTVDEHTIQVISTLAQIERGELVEELPLVSGILKNGVNRKVLFVACLLHDIGKGRNEDHSILGARMARAICPRLG LKPAECETVEWLVRYHLLMSDMAQKRDIADPRTVRDFAKAVKTRERLDLLTVLTVCDIRGVGPNTWNNWKATLLRSLHRS TAMALETGLEDLNREQLEGEAKKRLRAALTSWSKGDIKTEVDRHYGPYWQGLDLATQVTFAKMLGGLKDDEIKIDTKQDT DRDATRVCFALADHPGILTRLAGALSLVGANVVDARTYTSKDGYATAVFWVQDREGSPYEKARLPRLTTMIRKTLMGEVV ASEAMEKRDKIKKRERPFNVPTTITFDNEGSEIYTIIEVDTRDRPGLLYDLAKCLAAANVYISSATIATYGVQVVDTFYV KDTFGLKLHSEPRRAALERKLRDAIARVAERAGA >Mature_914_residues MLLPNEDIIDRPALAARLDAVCAQATDAAAIRAATVTELSRAQGTARDALARAITASPLAARRATRSYAFLTDVLVTEVL RVAQTYIHPTNIQSESERIAVLAVGGYGRAEMAPSSDVDLLFLTPWKVTGKIESIIESTLYMLWDLRLKVGHSSRTIKDC LRLGRDDYTIRTTFLEMRHLSGDAALSAELHDTLRAQLFTGTTGEFVEAKLEERANRHKKQGGQRYMLEPNVKEGKGGLR DLQTLYWIAKYEHGVEKAGELVALNVFRPEEFAAFDAAERFVWAVRCHLHLIAGRAQDMLSFDMQVEVADRLGYDDHSGR RAVEHFMQDYFRHATQVGELTRIFLTGLEARHVKQEPAILGFLRGRTRRKKLKDGYAVAQNRLNITDPEAFFTDPLNILR LFEEGLRTNYLIHPDAMREASARLDLIDDTMRRDREANRIFLDLMLKHGNPERGLRRMNELGVLAAFLPEFAHIVAMMQF NMYHSYTVDEHTIQVISTLAQIERGELVEELPLVSGILKNGVNRKVLFVACLLHDIGKGRNEDHSILGARMARAICPRLG LKPAECETVEWLVRYHLLMSDMAQKRDIADPRTVRDFAKAVKTRERLDLLTVLTVCDIRGVGPNTWNNWKATLLRSLHRS TAMALETGLEDLNREQLEGEAKKRLRAALTSWSKGDIKTEVDRHYGPYWQGLDLATQVTFAKMLGGLKDDEIKIDTKQDT DRDATRVCFALADHPGILTRLAGALSLVGANVVDARTYTSKDGYATAVFWVQDREGSPYEKARLPRLTTMIRKTLMGEVV ASEAMEKRDKIKKRERPFNVPTTITFDNEGSEIYTIIEVDTRDRPGLLYDLAKCLAAANVYISSATIATYGVQVVDTFYV KDTFGLKLHSEPRRAALERKLRDAIARVAERAGA
Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]
COG id: COG2844
COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnD family [H]
Homologues:
Organism=Escherichia coli, GI1786363, Length=806, Percent_Identity=33.0024813895782, Blast_Score=390, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR010043 - InterPro: IPR003607 - InterPro: IPR002934 - InterPro: IPR013546 [H]
Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2 [H]
EC number: =2.7.7.59 [H]
Molecular weight: Translated: 102977; Mature: 102977
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLPNEDIIDRPALAARLDAVCAQATDAAAIRAATVTELSRAQGTARDALARAITASPLA CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHH ARRATRSYAFLTDVLVTEVLRVAQTYIHPTNIQSESERIAVLAVGGYGRAEMAPSSDVDL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCE LFLTPWKVTGKIESIIESTLYMLWDLRLKVGHSSRTIKDCLRLGRDDYTIRTTFLEMRHL EEECCCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCEEHHHHHHHHHC SGDAALSAELHDTLRAQLFTGTTGEFVEAKLEERANRHKKQGGQRYMLEPNVKEGKGGLR CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHH DLQTLYWIAKYEHGVEKAGELVALNVFRPEEFAAFDAAERFVWAVRCHLHLIAGRAQDML HHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH SFDMQVEVADRLGYDDHSGRRAVEHFMQDYFRHATQVGELTRIFLTGLEARHVKQEPAIL HHHHEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHH GFLRGRTRRKKLKDGYAVAQNRLNITDPEAFFTDPLNILRLFEEGLRTNYLIHPDAMREA HHHHCCHHHHHHHCCHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHCCCEEECCHHHHHH SARLDLIDDTMRRDREANRIFLDLMLKHGNPERGLRRMNELGVLAAFLPEFAHIVAMMQF HHHHHHHHHHHHCCHHHHHEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NMYHSYTVDEHTIQVISTLAQIERGELVEELPLVSGILKNGVNRKVLFVACLLHDIGKGR HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC NEDHSILGARMARAICPRLGLKPAECETVEWLVRYHLLMSDMAQKRDIADPRTVRDFAKA CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VKTRERLDLLTVLTVCDIRGVGPNTWNNWKATLLRSLHRSTAMALETGLEDLNREQLEGE HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH AKKRLRAALTSWSKGDIKTEVDRHYGPYWQGLDLATQVTFAKMLGGLKDDEIKIDTKQDT HHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCC DRDATRVCFALADHPGILTRLAGALSLVGANVVDARTYTSKDGYATAVFWVQDREGSPYE CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHH KARLPRLTTMIRKTLMGEVVASEAMEKRDKIKKRERPFNVPTTITFDNEGSEIYTIIEVD HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEEC TRDRPGLLYDLAKCLAAANVYISSATIATYGVQVVDTFYVKDTFGLKLHSEPRRAALERK CCCCCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHEEEEEECCCCEEECCCHHHHHHHHH LRDAIARVAERAGA HHHHHHHHHHHCCC >Mature Secondary Structure MLLPNEDIIDRPALAARLDAVCAQATDAAAIRAATVTELSRAQGTARDALARAITASPLA CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHH ARRATRSYAFLTDVLVTEVLRVAQTYIHPTNIQSESERIAVLAVGGYGRAEMAPSSDVDL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCE LFLTPWKVTGKIESIIESTLYMLWDLRLKVGHSSRTIKDCLRLGRDDYTIRTTFLEMRHL EEECCCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCEEHHHHHHHHHC SGDAALSAELHDTLRAQLFTGTTGEFVEAKLEERANRHKKQGGQRYMLEPNVKEGKGGLR CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHH DLQTLYWIAKYEHGVEKAGELVALNVFRPEEFAAFDAAERFVWAVRCHLHLIAGRAQDML HHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH SFDMQVEVADRLGYDDHSGRRAVEHFMQDYFRHATQVGELTRIFLTGLEARHVKQEPAIL HHHHEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHH GFLRGRTRRKKLKDGYAVAQNRLNITDPEAFFTDPLNILRLFEEGLRTNYLIHPDAMREA HHHHCCHHHHHHHCCHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHCCCEEECCHHHHHH SARLDLIDDTMRRDREANRIFLDLMLKHGNPERGLRRMNELGVLAAFLPEFAHIVAMMQF HHHHHHHHHHHHCCHHHHHEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NMYHSYTVDEHTIQVISTLAQIERGELVEELPLVSGILKNGVNRKVLFVACLLHDIGKGR HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC NEDHSILGARMARAICPRLGLKPAECETVEWLVRYHLLMSDMAQKRDIADPRTVRDFAKA CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VKTRERLDLLTVLTVCDIRGVGPNTWNNWKATLLRSLHRSTAMALETGLEDLNREQLEGE HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH AKKRLRAALTSWSKGDIKTEVDRHYGPYWQGLDLATQVTFAKMLGGLKDDEIKIDTKQDT HHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCC DRDATRVCFALADHPGILTRLAGALSLVGANVVDARTYTSKDGYATAVFWVQDREGSPYE CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHH KARLPRLTTMIRKTLMGEVVASEAMEKRDKIKKRERPFNVPTTITFDNEGSEIYTIIEVD HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEEC TRDRPGLLYDLAKCLAAANVYISSATIATYGVQVVDTFYVKDTFGLKLHSEPRRAALERK CCCCCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHEEEEEECCCCEEECCCHHHHHHHHH LRDAIARVAERAGA HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA