| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is mviN [H]
Identifier: 89053387
GI number: 89053387
Start: 849923
End: 851554
Strand: Reverse
Name: mviN [H]
Synonym: Jann_0896
Alternate gene names: 89053387
Gene position: 851554-849923 (Counterclockwise)
Preceding gene: 89053388
Following gene: 89053385
Centisome position: 19.72
GC content: 67.03
Gene sequence:
>1632_bases ATGACCGAGACCGACCCGTTCCACGTCCCGCCCCCGCCGGAGCGCCCCACCCCCAAACCCATCCGGGCCCTGCGCGGGTT CTTCACGGTGGGGTTCTGGACCATGGCGAGCCGCATCCTCGGCTTCGTGCGCGACATCCTGATCGCCGCCTTCCTCGGCT CGGGTCCCGTGGCGGATGCCTTTCTGGTGGCCTTCTCCCTGCCCAACATGTTTCGCCGGTTCTTTGCCGAAGGGGCGTTC AACACGGCCTTCGTGCCGCTGTTCGCCAAGAAGGTCGAAGGCGGCGACGATGGCGAGCGCTTTGCCCAGGATGCTTTTTC GGGCCTGGCTGGCATCCTGATCGCGCTGACGCTTCTGGCGCAACTGGCCATGCCGTGGCTGGTGCTGGCCATGGCCGGGG GCTTTGCAGGGGATGAACGCCTGCCCTTGGCGGTGGATTTCGGGCGCATCGCCTTCGTCTATATCCTCTTCATTTCTCTG GCGGCGCTGTTCTCGGGTATGCTGAACGCCATCGGGCGCTTTGCCGCCGCCGCCGCCGCGCCGATCCTTCTCAACATCGT GCTCGTCTCCGCCATGGTGCTGGTCTATCTGACCACGCCCGACGGCAAGATGACCAACCTCGTCGACCCGGCCGAGGCCT ATGGGCGCGCGCTGTCGTGGGGCGTGCCGCTGGCGGGCATCGCGCAATTGGCGCTGGTCTGGATCTCGGTGAAGCGCGCG GGCTATTCCATTCAACTCCGCCAGCCCCGGCTGACCTCGGACATGCGCAAGCTCGTGGTGATCGCTCTGCCCGCGATGCT GGCCGGTGGCGTGGTGCAGGTGAACCTTCTGGTGGGCCGTCAGGTGGCCAGCTTCTATGACGGGGCGATTGCGTGGCTCT CCTATGCCGACCGCCTGTATCAACTGCCCCTGGGCGTCGTGGGCATTGCCATCGGCATCGTGCTTCTGCCCGACCTGTCG CGCCGCCTGCGGGCGGATGATGACGCGGGCGGGCGGGAGGCGCTTTCCCGCGCCGGAGAGCTGGCCATGGCGCTGACCAT CCCCGCCGCCGTGGCGCTTCTGGTGATCTCCGTGCCGTTGATCTCCGTCCTGTTCCAGCGCGGGGCCTTCACGGCAGACG ACACCGCCTCCACCGCCGTGGCGCTCAGCATCTACGCCCTGGGCCTGCCCGCTTTCGTTCTGCAAAAGGTGCTGCAACCG GTCTATTTCGCCCGCGAAGACACCCGCCGTCCGTTCCAATACGCGCTGGTCGCCATGGCGGTGAATGCGGTCGTCGCGGT CGGCCTCTCCTTCGCCATCGGGTTTCTGGCCGCCGCCGTCGCCACAACGCTCGCCGCCTGGGTCATGGTTGGCCTCTTGT CCCGGGGCCGGACGGACTTTGGCGATGTGGTGCAGTTCGATGACCGCTTCCGCTCGAAGATCTGGCGGATCTGCGCGGCC TCCGTCGCCATGGGCCTGATGCTGTTTCTGGGCGAGATCCTGTTGGGGGTCTTCCTGGGCGTCGACGGCCTGCGCTACAT CGCATTGGCCCTGCTCGTCGCCATCGGCCTGGGCAGTTACTTCGGCTTCGCGCGCCTGTTCGGAGCGTTCAGCCTGGCCG AGATGAAAGCCACGATGCGCGGGCGGCCATAG
Upstream 100 bases:
>100_bases AGGACACCTTCGGGCTGAAACTGCATTCCGAGCCGCGCCGCGCCGCCTTGGAGCGCAAGCTGCGGGACGCCATCGCCCGG GTTGCCGAACGGGCCGGGGC
Downstream 100 bases:
>100_bases CCACGGCCCCCACACTCCCAATTTCCCCGTTCCCTAAATATCCCCGCCGGAGGCTCCGACAATGTCCACCGGCGCCACCA TTGCTTGACGGGCACACCCG
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MTETDPFHVPPPPERPTPKPIRALRGFFTVGFWTMASRILGFVRDILIAAFLGSGPVADAFLVAFSLPNMFRRFFAEGAF NTAFVPLFAKKVEGGDDGERFAQDAFSGLAGILIALTLLAQLAMPWLVLAMAGGFAGDERLPLAVDFGRIAFVYILFISL AALFSGMLNAIGRFAAAAAAPILLNIVLVSAMVLVYLTTPDGKMTNLVDPAEAYGRALSWGVPLAGIAQLALVWISVKRA GYSIQLRQPRLTSDMRKLVVIALPAMLAGGVVQVNLLVGRQVASFYDGAIAWLSYADRLYQLPLGVVGIAIGIVLLPDLS RRLRADDDAGGREALSRAGELAMALTIPAAVALLVISVPLISVLFQRGAFTADDTASTAVALSIYALGLPAFVLQKVLQP VYFAREDTRRPFQYALVAMAVNAVVAVGLSFAIGFLAAAVATTLAAWVMVGLLSRGRTDFGDVVQFDDRFRSKIWRICAA SVAMGLMLFLGEILLGVFLGVDGLRYIALALLVAIGLGSYFGFARLFGAFSLAEMKATMRGRP
Sequences:
>Translated_543_residues MTETDPFHVPPPPERPTPKPIRALRGFFTVGFWTMASRILGFVRDILIAAFLGSGPVADAFLVAFSLPNMFRRFFAEGAF NTAFVPLFAKKVEGGDDGERFAQDAFSGLAGILIALTLLAQLAMPWLVLAMAGGFAGDERLPLAVDFGRIAFVYILFISL AALFSGMLNAIGRFAAAAAAPILLNIVLVSAMVLVYLTTPDGKMTNLVDPAEAYGRALSWGVPLAGIAQLALVWISVKRA GYSIQLRQPRLTSDMRKLVVIALPAMLAGGVVQVNLLVGRQVASFYDGAIAWLSYADRLYQLPLGVVGIAIGIVLLPDLS RRLRADDDAGGREALSRAGELAMALTIPAAVALLVISVPLISVLFQRGAFTADDTASTAVALSIYALGLPAFVLQKVLQP VYFAREDTRRPFQYALVAMAVNAVVAVGLSFAIGFLAAAVATTLAAWVMVGLLSRGRTDFGDVVQFDDRFRSKIWRICAA SVAMGLMLFLGEILLGVFLGVDGLRYIALALLVAIGLGSYFGFARLFGAFSLAEMKATMRGRP >Mature_542_residues TETDPFHVPPPPERPTPKPIRALRGFFTVGFWTMASRILGFVRDILIAAFLGSGPVADAFLVAFSLPNMFRRFFAEGAFN TAFVPLFAKKVEGGDDGERFAQDAFSGLAGILIALTLLAQLAMPWLVLAMAGGFAGDERLPLAVDFGRIAFVYILFISLA ALFSGMLNAIGRFAAAAAAPILLNIVLVSAMVLVYLTTPDGKMTNLVDPAEAYGRALSWGVPLAGIAQLALVWISVKRAG YSIQLRQPRLTSDMRKLVVIALPAMLAGGVVQVNLLVGRQVASFYDGAIAWLSYADRLYQLPLGVVGIAIGIVLLPDLSR RLRADDDAGGREALSRAGELAMALTIPAAVALLVISVPLISVLFQRGAFTADDTASTAVALSIYALGLPAFVLQKVLQPV YFAREDTRRPFQYALVAMAVNAVVAVGLSFAIGFLAAAVATTLAAWVMVGLLSRGRTDFGDVVQFDDRFRSKIWRICAAS VAMGLMLFLGEILLGVFLGVDGLRYIALALLVAIGLGSYFGFARLFGAFSLAEMKATMRGRP
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=439, Percent_Identity=35.9908883826879, Blast_Score=230, Evalue=2e-61,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 57952; Mature: 57821
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETDPFHVPPPPERPTPKPIRALRGFFTVGFWTMASRILGFVRDILIAAFLGSGPVADA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH FLVAFSLPNMFRRFFAEGAFNTAFVPLFAKKVEGGDDGERFAQDAFSGLAGILIALTLLA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QLAMPWLVLAMAGGFAGDERLPLAVDFGRIAFVYILFISLAALFSGMLNAIGRFAAAAAA HHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PILLNIVLVSAMVLVYLTTPDGKMTNLVDPAEAYGRALSWGVPLAGIAQLALVWISVKRA HHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHC GYSIQLRQPRLTSDMRKLVVIALPAMLAGGVVQVNLLVGRQVASFYDGAIAWLSYADRLY CCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH QLPLGVVGIAIGIVLLPDLSRRLRADDDAGGREALSRAGELAMALTIPAAVALLVISVPL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISVLFQRGAFTADDTASTAVALSIYALGLPAFVLQKVLQPVYFAREDTRRPFQYALVAMA HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VNAVVAVGLSFAIGFLAAAVATTLAAWVMVGLLSRGRTDFGDVVQFDDRFRSKIWRICAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SVAMGLMLFLGEILLGVFLGVDGLRYIALALLVAIGLGSYFGFARLFGAFSLAEMKATMR HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRP CCC >Mature Secondary Structure TETDPFHVPPPPERPTPKPIRALRGFFTVGFWTMASRILGFVRDILIAAFLGSGPVADA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH FLVAFSLPNMFRRFFAEGAFNTAFVPLFAKKVEGGDDGERFAQDAFSGLAGILIALTLLA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QLAMPWLVLAMAGGFAGDERLPLAVDFGRIAFVYILFISLAALFSGMLNAIGRFAAAAAA HHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PILLNIVLVSAMVLVYLTTPDGKMTNLVDPAEAYGRALSWGVPLAGIAQLALVWISVKRA HHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHC GYSIQLRQPRLTSDMRKLVVIALPAMLAGGVVQVNLLVGRQVASFYDGAIAWLSYADRLY CCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH QLPLGVVGIAIGIVLLPDLSRRLRADDDAGGREALSRAGELAMALTIPAAVALLVISVPL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISVLFQRGAFTADDTASTAVALSIYALGLPAFVLQKVLQPVYFAREDTRRPFQYALVAMA HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VNAVVAVGLSFAIGFLAAAVATTLAAWVMVGLLSRGRTDFGDVVQFDDRFRSKIWRICAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SVAMGLMLFLGEILLGVFLGVDGLRYIALALLVAIGLGSYFGFARLFGAFSLAEMKATMR HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA