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The map label for this gene is sdhD [H]

Identifier: 89053301

GI number: 89053301

Start: 770651

End: 771022

Strand: Reverse

Name: sdhD [H]

Synonym: Jann_0810

Alternate gene names: 89053301

Gene position: 771022-770651 (Counterclockwise)

Preceding gene: 89053302

Following gene: 89053300

Centisome position: 17.86

GC content: 62.9

Gene sequence:

>372_bases
ATGGCATATGTAACCGACCGCAAACGCGTTTCCGGCCTCGGCTCCGCCAAGGGGGGCACCGCGCAGCACTGGACGATGAC
CGTCACCTCCGTGGCGCTTCTGATCCTCACGCCGTTCTTTCTGGCCATCATCGGCAGCGCCCTTGGCAGCGACCACGCCG
ACGTCATCGCCACGCTCGGCAAGCCCGTGCCTGCGCTGATCGTCGCGGCCTACCTTGTCGTGGGCATGCACCACCTACGT
TATGGGATGCAGACCCTGCTGGAAGATTACACCCACGGGCTGACCAAAAAGGTCTCGATCATCGTGACCACCATACTCAG
CTACGGGCTGGCCGCTGGCGGCCTTGTGGCCCTGATGCAAATCGCGCTTTGA

Upstream 100 bases:

>100_bases
CCTTGATGCCGACACGTCCGACAAGATGGGCTGGGGCATGCTGATCGGCTCCGTTGTGCTCACCGTCCTGACGCTCATCG
CGATTTAAGGAGCTCACATC

Downstream 100 bases:

>100_bases
GGAGCTGACGATGAAAGATACCACTTCCCCCGCCTACGCCCTGACCCACCACACCTATGACGTAGTGGTCGTGGGTGCCG
GTGGCTCTGGCTTGCGGGCA

Product: succinate dehydrogenase subunit D

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MAYVTDRKRVSGLGSAKGGTAQHWTMTVTSVALLILTPFFLAIIGSALGSDHADVIATLGKPVPALIVAAYLVVGMHHLR
YGMQTLLEDYTHGLTKKVSIIVTTILSYGLAAGGLVALMQIAL

Sequences:

>Translated_123_residues
MAYVTDRKRVSGLGSAKGGTAQHWTMTVTSVALLILTPFFLAIIGSALGSDHADVIATLGKPVPALIVAAYLVVGMHHLR
YGMQTLLEDYTHGLTKKVSIIVTTILSYGLAAGGLVALMQIAL
>Mature_122_residues
AYVTDRKRVSGLGSAKGGTAQHWTMTVTSVALLILTPFFLAIIGSALGSDHADVIATLGKPVPALIVAAYLVVGMHHLRY
GMQTLLEDYTHGLTKKVSIIVTTILSYGLAAGGLVALMQIAL

Specific function: Membrane-anchoring subunit of succinate dehydrogenase (SDH) [H]

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014312
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 12907; Mature: 12775

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYVTDRKRVSGLGSAKGGTAQHWTMTVTSVALLILTPFFLAIIGSALGSDHADVIATLG
CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
KPVPALIVAAYLVVGMHHLRYGMQTLLEDYTHGLTKKVSIIVTTILSYGLAAGGLVALMQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAL
HHC
>Mature Secondary Structure 
AYVTDRKRVSGLGSAKGGTAQHWTMTVTSVALLILTPFFLAIIGSALGSDHADVIATLG
CCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
KPVPALIVAAYLVVGMHHLRYGMQTLLEDYTHGLTKKVSIIVTTILSYGLAAGGLVALMQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAL
HHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA